Array 1 194318-194931 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MPJK01000015.1 Haemophilus parainfluenzae strain 65114 B Hi-3 Contig_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=====================================	====================================	==================
    194318	    37	 100.0	    34	.....................................	TTATAGGTATGGTTAATCGCTGCACAGACGTCAT  	
    194389	    37	 100.0	    34	.....................................	CGATCTCGGTGTTACTTTCGCCAAAATTGTCGAC  	
    194460	    37	 100.0	    36	.....................................	AAGGTTTGGATCTTCTGGATCTTCAGAAGGGTTATT	
    194533	    37	 100.0	    35	.....................................	TTGAGTTTGTTTAACTCTTTGATGATATCTTCGGC 	
    194605	    37	 100.0	    36	.....................................	AACACAAATTTGCCATAAGTAAGGACGCCAGAGTAA	
    194678	    37	 100.0	    36	.....................................	TCACGGATTTGAAATGCTGTTGAGTAGTTAGTGTGT	
    194751	    37	  97.3	    34	................T....................	TTAGTTCTTCGATCTCTTTTGCGCTTTTATTTAA  	
    194822	    37	 100.0	    36	.....................................	TAGACACCTGCGACTGGTTTATTAGTGTCATCATCA	
    194895	    37	  81.1	     0	............C......A..G.........TT.TA	|                                   	
==========	======	======	======	=====================================	====================================	==================
         9	    37	  97.6	    35	GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	                                    	       

# Left flank :   AAATTCTAGGAAGAAAAAAATGGCACAATATTTAATTGGTTACGATATTGCCGATCCTAAACGACTACAACGGATTTATCGTCGAATGACAAATTATGCGACCCCTATTCAATATAGTGTATTTATTTTGGATGGCACAGAAAAACTACTTAAGCAATGTTTAGCAGAGATTATGTTAATTTTCCACAAAAAGGAAGATGATTTGCGCGTCTATCCCTTACCGGCCAATGCGGCTCAATGGCGACTAGGTAAATCAAGTTTACCTGATGGGATTTACTGGACGGCCTTGCCCACAGCCTTAACCTTATAAAATGCTACTGGAGTATTTCACAAACTCTGCTAAAATACACCGCACTTTTGGCTGAGTTTTGAAAAAAAAGAAGAATGATAAAGATTGTTCAATATTTAATCAAATCAATACCCAACTATTCAAGCATCAGAAAAAGTTGGGAAGTGGCTCTGGGAAGCCTTGCCACACAAGGTTCTAACACCCCACTGCA
# Right flank :  AAGTATTTATTTGGTGAGAGGTAAAGAAAACGGCCAAAAACCTATTGATTTTTGACCGCACTTTATTTGAAGAGGGGATTAACGTTTAAACATGCCGCCTAAACCGCCAAGGCCACCTAAGCCGCCTCCGCCCATTAAGCCTTGCATGCCGCGCATCATTTTCGCCATTCCGCCTTTGCGCATTTTTTTCATCATACGTTGCATTTCATCAAATTGTTTCAGCAACTTATTTACATCTTGCACTTGTGTGCCGGAACCTAATGCAATACGACGACGGCGAGATCCTTTGATAATATCTGGATTTGCACGTTCTTTTAAGGTCATGGAATTAATAATGGCTTCCATTTTGATGAACATTTTATCATCTACTTGATTTTTGACATGATCCGGTAAGTTTTTCGCACCCGGTAATTTTTCAAGCATCGACATCATACCGCCCATTTTTTTCATTTCACGGAGCTGTTCACGGAAATCGTCTAAGGTGAAATCATCCCCTTTCT

# Questionable array : NO	 Score: 3.14
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.35%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.50,-3.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.27   Confidence: MEDIUM] 

# Array family : NA
//