Array 1 249206-252950 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJLM01000004.1 Klebsiella pneumoniae strain EuSCAPE_HR027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249206 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249265 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249326 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249387 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249448 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249509 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249570 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249631 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249692 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249753 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249814 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249875 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 249936 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 249997 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250058 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 250119 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250180 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250241 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250302 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250363 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250424 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250485 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250546 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250607 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250668 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250729 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250790 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 250851 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250912 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 250973 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251034 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251095 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251156 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251217 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251278 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251339 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251400 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251461 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251522 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251583 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251644 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251705 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251766 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251827 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251888 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251949 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252010 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252071 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252132 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252193 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252254 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252315 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252376 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252437 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252498 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252559 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252620 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252681 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252742 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252803 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252864 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 252922 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //