Array 1 121513-118605 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOLX010000009.1 Iodobacter sp. HSC-16F04 NODE_9_length_169143_cov_32.759709, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 121512 28 100.0 32 ............................ TCACCGCGCCAGTAATTGAGTTCCCCCCGCTC 121452 28 100.0 32 ............................ TTGGGCAGGCCGTACAGGTCTACCAAATCGGC 121392 28 100.0 32 ............................ GAGACGGGCTTTTTGCATTGCGCGAAAGCGCC 121332 28 100.0 32 ............................ TGAGGATGCTCTTGCACATGTTGGATATCATG 121272 28 100.0 32 ............................ AATGGCAGCCCAGACACTTGGCTTGTTTAGGA 121212 28 100.0 32 ............................ CATTTCACCGCACTGCGCCCGTGGTAGGTGGC 121152 28 100.0 32 ............................ TGCATGAAAATTCGTCCTGACTCATGGTCGCA 121092 28 100.0 32 ............................ AAAGCGCAATTTGCAGCTGGCCAGCCGCTTAC 121032 28 100.0 32 ............................ AAGCGGCGCAGCTCAGCGGCTGCCTTGGATAA 120972 28 100.0 32 ............................ ATGAACGCCCGGCCAGTCGCCTGGAAATGCGA 120912 28 100.0 32 ............................ GAAAGCTGGATGCGTCAAAATAGCCCTGCTAG 120852 28 100.0 32 ............................ GCAAATTCATCTTTTAGATTTGAGAATTGTTT 120792 28 100.0 32 ............................ AAGCGGGGAAGTGGTGATCCGGCGTAAATCCA 120732 28 100.0 32 ............................ TAATGGGATATTGTTTTCACCTGTATGCTGAA 120672 28 100.0 32 ............................ AGGCACTGGTTCCAGCGGCGATATCAATACCA 120612 28 100.0 32 ............................ CTTTAAAGCTGCGCGGAGGTATCGCTTTTAGG 120552 28 100.0 32 ............................ CTGAGCTTGACTGCAGCAGGTCTGTCATCCAA 120492 28 100.0 32 ............................ GGACTGCCTGTTACATTTACTTCTCCGCAATC 120432 28 100.0 32 ............................ ACAACATCATCAGCCACACTCGCCCAATTAAC 120372 28 100.0 32 ............................ AGCAACTGAGGATTTTAGCGTATCGATAACAG 120312 28 100.0 32 ............................ ATGCCCGCCCTTGAAATGGTTTTTTCAGCATT 120252 28 100.0 32 ............................ GCCAAGTAATAACTCTTATTGTTGATCGCATC 120192 28 100.0 32 ............................ AGCACGGAAGCCGCCCGTATGCTCACTGAAGG 120132 28 100.0 32 ............................ ACAATGGCCGAAGCTTAGGTAATGGCCGGGGC 120072 28 100.0 32 ............................ GATACCAATACGCTCATGCCCCGGCCAATTTC 120012 28 100.0 32 ............................ GATGCTGTTTTCCAGAAAAACTACTCTGATTT 119952 28 100.0 32 ............................ TGAGCTACCTGCGCCGCACCAGCACCCTCCGC 119892 28 100.0 32 ............................ TAAAGGCGAATCCATAAGCCGAAGCGCTTAAG 119832 28 100.0 32 ............................ TGCAGGCCCGTGGCTTTACGACAGCGCAGCGC 119772 28 100.0 32 ............................ ACGGCAGCCATAAAGTCACCCATCGGCGTACC 119712 28 100.0 32 ............................ GTATTCAAGTGCAAACCATCTGATCCAATATA 119652 28 100.0 32 ............................ TAGGCGCTATGCGAACCACCCCAAAGCTAATG 119592 28 100.0 32 ............................ GCCAAGGGGCGGCCTAGCCGGTCGTAAGTCAG 119532 28 100.0 32 ............................ AGCCCCGCCGCTGCTGCCTTCGTCGTCGTCAT 119472 28 100.0 32 ............................ CGAAATTTCGCCCGAAGACTTACGCATATGGG 119412 28 100.0 32 ............................ AATCAACGGGTAGCATGCTACCCCGCATTGAC 119352 28 100.0 32 ............................ ACAGCCTAGTGCCATCTGATTACCCCCTCCTT 119292 28 100.0 32 ............................ AGTGGCGGGCAGACAGAATTGCCGGCCATGCG 119232 28 100.0 32 ............................ CTGAGCGGGTTGAAATGGTGCATTTTGTACTC 119172 28 100.0 32 ............................ AAATAAATCAGCGCAGCATCGACGAAATCAAG 119112 28 100.0 32 ............................ AACACAAGGCAAAGCTTCCAGCTCCTCTTGTG 119052 28 100.0 32 ............................ GGCCGACTTACAAAGCGCTGCCATTGGCGGCT 118992 28 100.0 32 ............................ TATATCGATTACAGTATCGAGCGTTACAGCTA 118932 28 100.0 32 ............................ TTGTCCCAATCAGCCTGCACTTGGCTTGCGCC 118872 28 100.0 32 ............................ GAAAACACAGGTAATCCGCCCGACGCCCCCGG 118812 28 100.0 32 ............................ TACACCCGAAGTCTTTGATCCCACGCCCACAA 118752 28 100.0 32 ............................ ACACTTTGCCGAGTTCGCAACCAATTATCAAC 118692 28 100.0 32 ............................ GCGATCTGTCACCCGATTTAAACGGGGATGTC 118632 28 96.4 0 ....................A....... | ========== ====== ====== ====== ============================ ================================ ================== 49 28 99.9 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : CTGCGCTGGAGCAGTTGATGGCAGAAAGCTGGTTAAAAGGCCTGAGGGATTACACCACAGCCAGTGCCATTTTATCTGTGCCTGCCAGTGCAAAGCATAGGGTGGTTAAAAGAGTGCAAGCAAAAAGCAGTGCCGAACGCCTGCGCCGCAGATCAGTCCGTAATGGCAGGCTAAGTGAGCAAGAGGCGCTAGAACGTATTTCATTTGCGAATGAAGCAAGGCTGAAGTTGCCCTTTATTCAAATGAAAAGTAATTCTACTGCCCAATCGTTTTGCCTCTTTATCCAGCAAGGCCCTTTGCAAGCTGAAGCGGTAGCAGGCACATTCAGCGATTATGGTCTAAGCCCTGTAGCGACCATTCCCGTTTTTTAACCCTCTTTTTACCTGCTTTTGTAACTCTTTGATTTTAAATGGGTTGTAAGGGCGGGTGAAATTAAGGGTTTTTTGGGAGAAAGCAGGGAAGTTCTTTAACAATGAAAGACATGTGTTTAAATAACAACT # Right flank : TATGTCGTGGAATTGGCTTGCATTCGTTGTTTAGAGAAACGGGTTTTGGTATTGGGATTGATATACAGCATGTTTGGAAAGGAATGATTTTTGCTCGGCTTACAAAATGTAGTTACCCTTGCGCCTTTCATTCAGCAGTTATATATGCCTCGTAAGCAGGGAGTTGGGATGGTGTTTTTTGATGGGGGCAATTGGCCGTGGTGGATTGCAGGCGGCTATTTGGCTGTGAGCATTGTGGCTTTTATTGCTTACGCGCTGGATAAATCCGCCGCCAGGAATGATCGCTGGCGTACAGAGGAGCGCACTTTGCATTTGCTGGCGCTGTTGGGGGGCTGGCCTGGGGCTTTGCTGGCGCAGCGGGTGCTCAGGCATAAATCTAAAAAGACTGCGTTTTTGCGGGTTTTTTGGGCCACGGTGCTGGTGAATTGCGCGGCTTTGGTGTGGGTTTTGCTGCGCTGGCGTTGAGCGGCGGTGCGTAAGAGGAGCGGTTTGTATGCCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //