Array 1 827881-827669 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF238838.1 Gluconobacter frateurii NBRC 103465 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 827880 29 100.0 32 ............................. CAGGACGCCACAGTGTCGTATCCTGACGCTGC 827819 29 100.0 32 ............................. ACACCCTCGATATACGTCAGGTCATCCTCGTC 827758 29 100.0 32 ............................. TCGATGGTGCCCTCGATATTGTCTGCTGCTGG 827697 29 89.7 0 .....................G....A.T | ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GTAGCCGTTCCCGGTTGTACCGGAGCGCAGCTTCCTGCAGGACGCGGATCATGGGAACCATGTGGTTACCCATGTCCCTGATGCCTGCGAGTTCCCGATTGCTGGCGGAAAGCAGGGCTGCCACTGAACCAAAGCGTTCCAGAAGTGCTGGAACGAGGGTGTCCACTTTTTCTTTACGGCCCGTAAAAATCTGAACGATCAGGCGTAGCAGGGCGCCATCGTCCAGGTGCCGGGCCCGTCCGCTCAGAAGGGCAACAGGGGGCGGAATATGCTCGTTGTTTGTCGGCTGTGGGTTGATGGAAAATGGTGCGGTTTGGAAAAGGATTTTTCCTGAGTATTCAGCAAACCCATCATCAGAGGCTGGAGCATTAGTCATTTGTTTTTCTGGCACTGTAAGGCGAAGAAGATCAAGGTAGCACCGGCCCTCAAAAAAGCTTAAAAAATCGGTAGATTTTTCGAGGGCTGTTTTTCCTTTGGAAAACAGCTATCTAACAGGAAGA # Right flank : TACAGGAGGCATTCCTGTCTGAGGCTGCTGAGAGTTGCTGTTTTGGTGCTGATAAGGACATCATGCAGAACAATGGAGAGTGGCCTGAGAGCGTTTTCCAGTGTTCGTGCGGCTGTTGAGAGGGCTGGTGCTTTCAGGGCGGGCTGGACGTGTACGCCGATGATGGCTGTAGCGTGCAGAGCCAGGGCGCGAATGGCGATGGCGCGGTTCAGGAAGGTAATATCTTCCTCTGGCGGAGCGGCTTCATCCGCGAGGAGCCGGTTTCGGTTATCCAGATAGAGAACGCGAAGCTGTCCGGCGACTGCGCTTTTCAGTGCTGTTTCAAGGTACTCTGTCAGTTGGGGCCAGTTTCCCAGAATGGGGCGTTCACGGTGTTCCGCTGAAGCGAGGCGTTCTGCGGCGACTGATGGCAGACGAAGGGCTCGGATGGTATCGTCGTTCAGGCCGGCATTTCGCAGATCCCGCGTTGGCGCACGGAAGACGTTGATGAGACTTCCGAA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2953686-2953413 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF238838.1 Gluconobacter frateurii NBRC 103465 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2953685 29 100.0 32 ............................. CTGGCGAACTGATCACGACGCAGGTTTCCTAC 2953624 29 100.0 32 ............................. AACGAAGAGCCGGTCTTTCTGGATTACTCGAC 2953563 29 100.0 32 ............................. GTGACACTCCACATTGGCGTCATAGAAACCAA 2953502 29 100.0 32 ............................. CCCAACCCCCTATTTTGGGTTAGGCGCGGTGT 2953441 29 93.1 0 .......................A..G.. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.6 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GATCGAAGACGTTCTCTCCGCAGGCGGCCTCTCCCCTCCCGAAGCACCGGAAGAAGCCATGCCCGTGGCCTTTGAAGACCCGGAAGGATTGGCCGATGCTGGTCATCGTGGTTGAAAATGCCCCACCACGCCTGCGAGGACGGCTTGCCGTCTGGCTGCAGGAAGTCCGTGCAGGCGTTTATGTCGGAACTTATGGCAGAAAAGTCCGGGAAATGATCTGGCAACAGGTCTGCGCCTATATTGACAGCGGCAATGCCGTCATGGCCTGGGCCGCCCCGAACGACGCTGGATTTGAGTTCGATACCTGCGGTGCAAACAGACGTTGCCCCGTAGATCTCGATGGATTTCGTCTGGTCGAATTCGGCCCCGAAGCAGCCCTCCCCCTCCTGCCCGGCCCTCTTAATTCTCCCAACCGAAACAGGCGTTAAAAAGCTTTCGAAAAATCGGTAGATTTTTGAAGTGGAAAAATTCCCTTCTTAATCATAAACTTGCACACAAGA # Right flank : TCAGAACCAGATCTGTAATACCTGCACAAACCTTACTACCCGTCCCACATACCCTTGCAGACAAGGAGACATCCCATGAGCAAACTCACAAAAGAAGAACGGGACAGCCTGCCTGACGATGAATTCGGGCTCCCTGAAAAAACGGGCCTATCCTGTCGATACCAAGGCACGAGCACGCAATGCGAAAGCCCGCGCTACGCAGGAGCTAGAACGGGGGCTTCTCACACCGGAAGAGCGGGATGAAATTGACCGTGCTGCAGATCGGAAACTGAACGAAGACTAGCCAGAATCAAAAACGGCCCCGGATCACTCCGAGGCCGCTTTCTCTCAACACCTAATCAGTTCGCCTGCGCCGCCCGCAGCGGGGCATCAGCAGGAACATCCTTGAGCGGAATCCCCTGATACTTGCCCGTCAGGGTCTTCAGGAACGCCACGATGTCTGCAACATCCTGGTCGGTAATGTCATGATCCGGCGTTTCGTAACGTGCCATGGCACGAAC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3026898-3026686 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF238838.1 Gluconobacter frateurii NBRC 103465 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3026897 29 96.6 32 .........A................... ATGGTTCGCAAGCGTCGTGATCTGGTTCGGAA 3026836 29 100.0 32 ............................. CAGGGCTACCCAATACGGAGATGTAACCCCCG 3026775 29 100.0 32 ............................. AGACCTGGCATGAGCGGGCAGACGGATACGGA 3026714 29 75.9 0 .......T.............G.ACT.TC | ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 GTGTTCCCCGCGTGAGCGGGGATGAACCG # Left flank : CGGGAACTGCGCGTTCCGTTCCGGACGGCCCATCACGTCACGGGGCGTCTCGTCGGTCTGGCGGAGCAGCGTGGCTGTGATCTGGCGGACCTGTCTCTTGAAGACATGCAGGCCGTGGAACCGGGCATCAACGCCGGCATTTTCGATGTTCTAACGGTTGAATCTTCCCTGGCGTCCCGCACCAGTCTGGGCGGAACCGCTCCATCCAACGTACGTCAGCAGGCTCAGGCGTGGCTGGAAAAACTTGGAGACGCTGCATGAAACGTTTTCTGCTTGTTGGCCTGACCCTCGTAGCACTTGGCACCGGCCTGAGCGCGTGCGGAAAGAAAGGAGCTCCTCACGCCCCCGGCCCGGCTTCAGACATCACCTATCCGCGCAGCTATCCGCCTGAATAGTGAACGTTTGCAGGGATCTGTGAAGGCGTGAAAAACAGCCCGTAATAATCGGTAGATTTTCAGGAATGGAAATTTCCTTTCTGTATCAGTATGTTGTCAGGAAAA # Right flank : CGCTTTGAAGCACTATGTCGTTTTTTCAATCCCAGACATAACAATGTTATGTCCGTTCCCGACGAGTGGCCATTATCAGCTATCCCCCAGCGCTTTAACCACCAGTGGGTGCTGCAGCACATTCTCTGCAGACCAACCCAGCGAGCGGAGGACACGCACCCCCTCTGCGCCGTCACGTTTGGAGAGCTTTTTTCCCTCATCATCCAGAATGAGGGCATGGTGCCTGTAATCAGGTTCAGGCCATTTCATCAGAGCCTGAAGCACACGATGAACGGATGTGGCAGCGTAAAGGTCCTGTCCTCTTGTGACGCAGGTTACGCCTTGTAGGGCGTCATCATGGGTCACGCACAGATGGTAAGACAGACCTGTGTCTCTGCGCCCCAGAACGATATCGCCAAATTCTTCAGCGCGCCCCGCAATCCGTCCCTGCCCGACTTCATACCAGGACGGCACACCATGGATTTCATTCAGGGCCCGCTCCATGTCGAGCCGCCAAACCG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //