Array 1 5362-5545 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQB01000134.1 Fischerella thermalis CCMEE 5273 NODE_202_length_43224_cov_25.952990, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 5362 36 100.0 39 .................................... GAGGCTCGATTTAAAATAGACACAACAATTCGGATTACT 5437 36 100.0 37 .................................... AACTATTATTTTGTCCGACCTCGAGACCAAGCCCAAT 5510 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ======================================= ================== 3 36 99.1 38 GTTTCCATTCAATTAGTTTCCCCAGCGAGTGGGGAG # Left flank : TTACACTATGATATGGTGCGTGCAGGTTTACTCATTTACGGACTTTACCCAGCCACACATTTGCGATCGCAAATTAACCTGAAACCTGTTTTGCAAGTCAGGGCCAGAGTCACCCAAGTCAAAACCATTGCTGCTGGGACTGGTGTGAGTTACAGTCATCAATTTATTGCCAAGCAAGAAATGCGAATTGCTGTTGTTGGCATTGGTTATGCCGATGGTGTTCCACGCAATCTTTCCAACAAAATGCAGGTATTAATTCGTGGTCAAAGAGTACAACAGATCGGCGCAATTACAATGGATCAACTGATGGTAGATATCAGTGCCTTACCAGATATACAAGAAGGTGAGGTAGTCACCCTACTAGGTCAAGATGGCAAACAACAAATCTCCGCTGATGATTGGGCAAATCAACTAAACACAATTTCTTGGGAAATTCTCTGCGGATTCAAGCATCGATTACCTCGTGTCGGTGTAATTTAGGTTCCCATTGTTTCCATTCA # Right flank : TAGTCCTATTTTAAACCGTTACCCAGTAAGATTTCCAGAGCCGATTTCCGAAGTTCAGATAATTTACAGACAAAAACATCTCAATTCCTCCAAACAAAAAGCCTAAAACCCTTATGTACTAAACAACCGAAGTTCACAACACAAAAATAGGCATTTGCAGAATTTGGGCTGAACTTCGGTAGTTGCTCTTAATTCGTAAAAATTATTGCTCTAGACAACTTTTATGCTATGATAAGGAACTGATGCGGATGTGGCGGAATTGGCAGACGCGCTAGATTTAGGTTCTAGTGCCGCGAGGCGTGAAGGTTCAAGTCCTTTCATCCGCATTTTAAATTAACTAATGACAGTACAAAATTATTTTGTAGGCTTCTTTATTGCAAAGCCGCAAAGCTTACAGGGAATGAGTAGAATTCCAGAGCAGGGTGATGCTAATCCTAGCTGTTCTTTAGTAACTGTTCGCCAGAACTATTGTTTAGATATAGCCGAGAATTAGATATTAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAGTTTCCCCAGCGAGTGGGGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 6116-5786 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQB01000471.1 Fischerella thermalis CCMEE 5273 NODE_767_length_7770_cov_26.294336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================= ================== 6115 38 97.4 36 .....................................A GCAAGGAGCTCTTTAGAAGTTTTAGCAAATTCACGA 6041 38 100.0 33 ...................................... GGAGCGTAGTGGAGCGAGCGGAGGGCGCGCGGT 5970 38 100.0 32 ...................................... TGTGACTAATGCCTTAATGCCTGCTGGATTTG 5900 38 100.0 39 ...................................... GACCGGATCCCAAATGAAATTGCAGATTTGCTTCGAATC 5823 38 97.4 0 ....................................T. | ========== ====== ====== ====== ====================================== ======================================= ================== 5 38 99.0 35 GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAACC # Left flank : CCTGACGGTACAGCAGCAAATATTCAACGCACAGACTCAATCAAAGATGGTGTGATTACAAACTCTTGGACGATCGCAACTGGTGATCCTATGGGTAAGCATAAAATAGAAGTTTATATTGGCGATCGCCGTATTGCTACTTTTGAGTTCGAGGTGGTTCCAGCTAAACGGCAAAAGCCAGCTCCAAAAGCGTAGTTACAAGTTTTGCTATAGTCGATAAATAAAGATTAATCTCTCTTCAGCTTAGAGTTGGTGCAAACCTGTAGGTGTTTAAAAAAAGCAGTCAAATTTAATGGCTACAAGCCCTACCTGTTATGGCTTTGAACCCTTTTACACTCAGATAGAGGTTTGCACCAATTCTGAAAGTCTTACCAGCAAAGCTTTTGACCTATTTTTTCATAATTCATCTTGACACCTCGATGGCTGAAAAGCTATATTTTGTCCAGGTCTGCACCACTGAACCTTGAAAACCATATACAGCAAAGCTCCTGAATCTAGCT # Right flank : CGTAGTATGCATTTGACAAATTAAAGCTTACTGCTTGAGATTAGAACTTAAAGGCGTTGCAGAGAAAGCGGGATGATTTTGTTTTATCTTTTAATTGACAAAAACTCAATCCTTGGCGCTCTTGGCGTCTTGGTGGTTCATTATATCACCGCTACGAACAGACCAGCAAGACTGAAACTAGCAGTGGTAATTGCAAAAGTTCCCGTTTGCAATAAATTAACTAAAGTTCCTCCGATGACTGCACCCACAATTCCTAACAGCATTGTTGCCAGGATACCACCACCTTGGTAACCAGGATAAATTGCTTTGGCGATCGCGCCAGCCAACAAACCTAATACAATCCAAGCAAGAAGATTTATGATTCGACTCCTTAATAGTTGCGAACAGAATATAGTTGAAGATAGAGTTTTAGAGATAATAAGGTTAGAGGTTTATAGACCCTAGACGTTCGCAAATTTCGACCGCTTTATCGAGGTTTTACCTCTCGTTATTTGCGACAA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 4614-5580 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQB01000190.1 Fischerella thermalis CCMEE 5273 NODE_278_length_8688_cov_21.820557, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================================================================================================================================= ================== 4614 30 100.0 42 .............................. AAGTTCGCTTTGCCGGCAACTCTTTCAAGCATTGTTCTTTTG 4686 30 96.7 41 T............................. AAGTTCGCCCATCTCGCCTAATTTTCCTATAAGCGAGAAAA 4757 30 100.0 47 .............................. AAGTTCGCAAACAACTTCTTCGCTGATTCCAAAGCCTGCGATCGCAG 4834 30 100.0 115 .............................. AAGTTCGCCGAGCACAAGAAAAAAGGCTTTCAGTGATTGGCGAACATTTAATAGAGAATGGCTGATTGAAACAAGTTCGCCGAGCACAAGAAAAAAGGCTTTGGCTCGCTCGAAC 4979 30 100.0 183 .............................. AAGTTCGCAGATTGGGAACCGGGCTTTCCAGCGACCGGGCGCCGCATCCTGGTCAAGATGATATGTACAAAAACTCCAAACCGGGCGAACCGGGCTTTCCAGCGACCGGGCGCCGCATCCTGGACCCTATTAGGGATTGAAACAAGTTCGCAGATTGGGGACATTGAGGTAGTAAGCTAAATC 5192 30 100.0 43 .............................. AAGTTCATCCACTGATAATATCTATGCCTGGGAAAATTACGGA 5265 30 100.0 42 .............................. AAGTTCATCTGAAACCAACGACAAAAAACAACCCTTGCCCAC 5337 30 100.0 41 .............................. AAGTTCATCTAGACAAACCACGACCTTCCCTCTTGTTGCAA 5408 30 100.0 42 .............................. AATAGATTTTTCAAGCTCTTTCAAAATTGCAGTGAGTTGCAA 5480 30 60.0 38 ............A..G..CTAAT.GCGGG. GGGGGACTTGTTACTTTCAAAATTGCAGTGAGTTGCAA AAA [5493] 5551 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================================================================================================================================================================= ================== 11 30 96.1 64 CTTAAATAAATCCCTATTAGGGATTGAAAC # Left flank : TCCCGTGAAAAACTCTACTTAAAATATAGTAGGGTGGGGATGTATGGATGATGTTGTGATTTTATTTGGGGTGTGTGGTTGAGCATTTTTTTTTAACCACAAAGCCACAAAGGATCGAACTACGTCATAAGTCTTACGCACATAATTGATTGAGCATCTTTTTTGAACCACAAAGCCACAAAGACACAAAGAAAAATCGATTTTGAAGTCCTAGTGTTATGGCGATCGCCCTAGGCTACTTAGGCTTGATTGGTGCAAACCTGTAGGTGTTTTTTGGAGCAGGTGAATTTTAATCGCTGGAAGCCCTACCAGTTCTGCTTTTGAATGCTTCTAAGTCCAAAAGGGGTTTGCACCAATTGTGAAATGCTTGCCAGACAAGGTTTTGAGCCTATTTTTTCTTCTCCACCCTTGACATTCCGATGGCTGAAAAGCTATATTCACTTCAGGTCTGCACCACTGAACCTTGAAAATAAAATACAGCAATGCTTCTGGAGTTGCAA # Right flank : CTTAATTGCAATAATGTTTGAGATATAGGATTCCCAAATCATCCGTAAGAGACAAGCTCCCCGACTTTTCCAAAAATTCGGGGAGCTGAGCTTTGCGATTCTCACAAATGATATAGAAGTGCCATAGATAAACCAGAAGCGATCGCTCTAGAAGAGGAAGATATACACAATCTGATGCTTGGCACGGTGGGTAGTATTTTAAGTTGTGGACGACTGTTAAGTAAGATTTATACAGACGCACTAAACTTTTCGGAGAAGGCGTCAATGAGCTTGTAGTTTTAACGTAGTTGTTTGGTTCTAAAATTTTGAGATTAAATCACGCACCTCTTCTAGAAATACAAAATGACAAATCGAGTAATTTTCATTGGATTATCACTGTTTTTATACGGAATAGCGCTTAGCTTACCAGCTCTTGCCTTCAAAATAGTTGAAATTACCTTTGGAGGGCAAAACAATAAGGTTGAAATCGCTACATTGACAGATAAAATTATTACAATGAC # Questionable array : NO Score: 6.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:-2.24, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAAATAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.88%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //