Array 1 47389-47755 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACTEI010000006.1 Helicobacter pylori strain ES-7 ES-7_contig6, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================================================================================================================== ================== 47389 25 68.0 146 A.........CG.G..T.G..AA.. GCGATGCAGGGACGCAAAAATCTTACATGAATTTTAAAGGCTCTAATATCAAGGTCAGTGGCTCTAGCTTTAAAGATGACACTGATGGGGGCTTTAATTTCAGCGGTAATAACAATAATAGCGCTATCTCCTTTAATCAAACGAAC 47560 25 100.0 35 ......................... GTAACAGCGCAAGTTCAAGCTTTGATAATAGTAGT 47620 25 92.0 32 ...........G......C...... ATAGCACTCAATCTGCTTTTAATAACAGCACT 47677 25 100.0 29 ......................... GTAACAACGCTAGCTTTAATAGCGACACC 47731 25 96.0 0 ....................T.... | ========== ====== ====== ====== ========================= ================================================================================================================================================== ================== 5 25 91.2 61 TTCAATCAAGGCACTTATAACTTTA # Left flank : AAAAGCCCTTAAAATGCCATAAAAAAACAAAATCCATTAAAAAGCCCTTTAATAAAAGCAAATCTTTTTTAAAAGCTTCGATTTTATTGATAGGAGCGTTGGGGGGATTATCCCACCTAAGGGCTAACGAGTGCCGTTATTGGTCATGGTCGTCTTGGGATTATCAAGATAATATTGAAAGCGGTCCTAATTCACCCACGCACAACTCTTATTGCCTTTTTAGCAGCGTTCAAGGCTCTGGGACTTATTATTTGAACACCCTTACCACTTATAGCGCTGGTGGGGCTAGTTTCACGCAAAAATTCAATGGCGGCACGCTTGATATAGGGGGGAATATCCGCTTTGGAGGCACAGGTATTAATGGAGGTGATGTAGGCTATATCACTGGAACTTATGACGCTCAAACGATTAATTTTAATTCTAGCCATTTAACAACCGGAAACTCATACGCTGATGGTGGTGGGGCCACGCTCAATTTTAATGCAACTAATAATCTCACT # Right flank : AATACTAGCAAGGTGAGTTTCTCAGGCATTAACACTTTAAATTCAAGTTCGCCTTTTGCCAGCCTTAAAGGCAGTGTGTCTTTTGGTTCTGGTGCGGTTTTTAACCTCAATCAAACCCTTAATAGCAATCAAACCTATGATATTCTCACTACAAACGGAGCGATCCAGTATGGGGTTTATCAAAGCTATTTGTGGGATCTAATCAACTATAAGGGCGATAAAGCCATTAGCCATGTTGGAGTGGGCAATAACACTTATGATGTAACCTTTGATATTAATGGGCAAGATGAAACCTTACAAGAAACCTTTAACAACCAATCCATTATTACCCAATTTTTAGGAGACGATTTACAACAACAAGCCCAACAAACCTACCAAGAGGATCTCACTCATTCCCAAAACGCTTTGAATAATGTTACTAGCGACAACACGATCGCAAATAATGATACAAGCTACACTCAAAGCAAAAATACTACTGTCGCTAAAGACGCTCAAGGTTT # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCAATCAAGGCACTTATAACTTTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //