Array 1 1052767-1055049 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP055517.1 Klebsiella pneumoniae strain RHBSTW-00405 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1052767 29 100.0 32 ............................. TTTCTTGATGCTATGTTGAAGAAGATGAGGGG 1052828 29 100.0 32 ............................. ATTTGGCAGAGGCTGGTCGTGTCGATGTCGAA 1052889 29 100.0 32 ............................. ATACGTCTGTTACTTTGCTATTATTAGAAAGC 1052950 29 100.0 32 ............................. TTTCCTGTACTGTTCAGTTGCATAGTCCAGCA 1053011 29 100.0 32 ............................. AAATCGCAACGCACATCGAAGCCGGAAAAGTT 1053072 29 100.0 32 ............................. AATACACGGGCGTTCAGGTTAAATATTTTGAC 1053133 29 100.0 32 ............................. TGTCATACGACCTGGTAAACGACCGTTCCATG 1053194 29 96.6 32 ..A.......................... GTTTTGTCGACAAAGTACGTCTGCTCTCTTGA 1053255 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 1053316 29 100.0 32 ............................. TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 1053377 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 1053438 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 1053499 29 96.6 32 ...........A................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 1053560 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 1053621 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 1053682 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 1053743 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 1053804 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 1053865 29 100.0 32 ............................. CAGTAGCAGCCATCGCTGAGGTGAAGGGCTGG 1053926 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 1053987 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 1054048 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 1054109 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 1054170 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 1054231 29 96.6 32 ..A.......................... AACGTAATTGGCTTACGGGGCGGTCGGCACAA 1054292 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1054353 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1054414 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1054475 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1054536 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1054597 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1054658 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1054719 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1054780 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1054841 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1054902 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1054963 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1055021 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GCAAACCAGAAACGTTCAACTTCCTCGGGTTCACGCACATCAGCGGGAAAGATCGCAACGGCAGGTTCATGCTGATACGAAAGACCCGCCGGGATCGGATGACGGCAACTCTGAAAGCCATCAAAGACGGTCTGCGAAGGCGCTGGCATTACTCAATCCCCGAACAGGGAAAATGGCTCAGGAGAGTGGTTCAGGGATACCTGAACTATCACTCGGTACCGGGCAACTTCCCCACCATGCAGAAGTTCAGGACACACGTAACAAACCTCTGGCGCCGGGCGCTCAGGCGCAGGAGCCAGAAGGATGATACGACCTGGACGAAAGCAAACAAACTGGCAGCCGCATGGCTACCAAGGGTTCGGGTTCTTCATCCATGGCCTGTGGAGCGGTTCACCGCCAGACACCCGAGGCAGGAGCCCGGTGCGTAAATCGCGCACGCCGGGATCTGTGCGGGGGGTATCCGGTAACGGGTATCCCTACCGCGACAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGAGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //