Array 1 1457-13 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBJX01000015.1 Comamonas granuli NBRC 101663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 1456 37 100.0 30 ..................................... ACAAACGCAGGGCGGCGGGCATCGCGTCCA 1389 37 100.0 30 ..................................... CCAACTGGCGCGGTCCACGATGTGCCGCTG 1322 37 100.0 30 ..................................... CGGCTTGTCGTTCTGCATTCGTCATCGCCA 1255 37 100.0 30 ..................................... GGTGGTGGTTCCTTTCAGGTGGGGCTATGA 1188 37 100.0 30 ..................................... CGGCGCCGCGTCCCCGCCATCGGCGGGCAG 1121 37 100.0 30 ..................................... TTGTGAGTCGCTGGCGCCACCCGCACCGCC 1054 37 100.0 30 ..................................... GGTCTGAGTGGTGCTGTCGGCAAAGGCCTG 987 37 100.0 30 ..................................... TTTTCTGGTTGTGTTATTCCGCAGGTTTTG 920 37 100.0 30 ..................................... CGCCATTGCCATCGAGCCACTCCGCGTAGG 853 37 100.0 30 ..................................... GTCATGCGCCATGTGGACTTCTCGCGCGCG 786 37 100.0 30 ..................................... TCCTTCCATTGCGTGACGGCAGACGATGAG 719 37 100.0 30 ..................................... TCGGCGTGCTCAACACCCTGGTGGTCAATA 652 37 100.0 30 ..................................... TTCATCCCTGAATGGGTCATCCTGGCCCAT 585 37 100.0 30 ..................................... GTGCGGCTGCGACTCCTGCCACTGGCGCGC 518 37 100.0 30 ..................................... CAATGGAGGTGCGCAGTTGACACTGGATAT 451 37 100.0 30 ..................................... CTTCGCGGGGCGTTAAGACTGTTTCCGTGG 384 37 100.0 30 ..................................... GGGTTTTTAGCAGGCATAGGTGCATCATAA 317 37 100.0 30 ..................................... CAGGAATGGGGACGAACACGGCCCTAACGT 250 37 100.0 30 ..................................... GGTGAAGAAGCGGGAGCGGGAGGGGCGCGG 183 37 100.0 30 ..................................... CTGCGCTGTGTTCTCCAGCGCGTGGCGGTT 116 37 100.0 30 ..................................... CTCCCCGGTCTTGGAGCGCACAACTTCCTT 49 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================== ================== 22 37 100.0 30 GAGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : AATCGCTGGCGCGGCTGTACGACGGCGGCAGCGAGCAGGTGCTAGAACTCCCCGGCCTAATTGGCCTACGCCAGCACGTCTTCGAGATGTAGCGGTGCGCACCATGGGCCAGGACACGAGGCGATTCATGCGAATGCTGGTGTTCTTCGATCTGCCCGTGGTCACCAAGACCGACCGGCGTGCCTACACCGTGTTCCGCCGTTTTCTGCTCAACGACGGCTACGACATGATCCAGTTCTCGGTCTATGGTCGAATCCTCAACGGCAACGATGCCGTACAGAAGCACATGCAGCGCCTGCTGGCCAACCTGCCGCCCGAAGGCTCGGTGCGCGTTCTCACGGTGACGGAAAAGCAGTTCGCCAGCATGAAACTACTGGTTGGCATGCCGCTGTTTCAGGAAAAAAAGATCGCGGCCAATCAAATGGCACTGTTCTGAAACAGCTTTTACAAGAACGAGAACCCGCGCCCCGTTAGGCGAGGCGCGGGTTTCGAGGGGGCCA # Right flank : CACAATCACCCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 1 195751-195513 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBJX01000008.1 Comamonas granuli NBRC 101663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 195750 37 100.0 30 ..................................... ACGAAGGTTGCTGCCTGCCTTCTATGCCGC 195683 37 100.0 30 ..................................... AGGCTGGCAACGGTGTCTTTGCCAGCGCCG 195616 37 100.0 30 ..................................... GGCGAAGCGTGCCACGTAGCCCACCTGGTG 195549 37 91.9 0 .................................TGG. | ========== ====== ====== ====== ===================================== ============================== ================== 4 37 98.0 30 GAGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : CGGGATGTTTGTTGCCGGAGGCACCGGCGG # Right flank : CTTGGCTTGGTAGGACCTTGCCCCACCAAGCCAAGGCCAGCGCTTCGCGCATGTTTAACAAGCTTATGGCATGCAGATTTCACCCCTTGGGTTCATTCTTGCCCACGCGCAGGCTGGCCAGCGCAGCAAAGGGGTTGGAGCGCGCAGCGCTGGCGGCCTCGAAGTCCTCGTCGCCGGAGGCCATGCGCACGGCGGTGGGGCACTCGTCGTGGCGCGGCACCAGGGGCAGGGCCATGAGGAGTTCGTCCTCGATGAGCTCGTGCAGGTCGAACTCGCGGCTCAGCACGAGCAAGTCCTCCTCGGTCTGCTCGTCCAGCGCCTCGGCCGTGGCCTCGTCGGCGACGAAGCGGAACCACCGGTCCACCTCCAGGGGCACGTCCACGGGGCCCAGGCAGCGCTGGCAGATCATGGGAAAGCTCGCCTGCACCTGCAGGTGCAACCAGAGCTGGCCGGTCTCGTTGCCCGTTTCGCGGCGCCACTCGCCGTGCACCTGCCAATCG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //