Array 1 533709-532887 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLLG01000023.1 Pseudomonas aeruginosa strain WH-SGI-V-07073 WH-SGI-V-07073_contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 533708 30 100.0 36 .............................. ACAAGTAGCGGCTCGTCGGTAGCCCAGTTCCCGCGT 533642 30 100.0 36 .............................. GCGCGATCGTCGCTGCGCTAGGCTGGTCTCGAAGGT 533576 30 100.0 35 .............................. TCCGTCAAGGAGCGATGGGTAGATTTCGATCACGT 533511 30 100.0 37 .............................. TGTGACTAAGTGGCTGCTCGTTGCAGTGGGTGTGCGT 533444 30 100.0 36 .............................. GCGCTCATGCGTGACAACGTACAGCAGCACAGCAGT 533378 30 100.0 35 .............................. CTTCGCGCTGGACGAGAACAACGCTCCTCTCTAGT 533313 30 100.0 36 .............................. ACCTGCTCGAGTTCGGCCTGGTGACTCTGACGTGGT 533247 30 100.0 35 .............................. AGCAACTATCGCAAGGCCCTGCCGCTGCAAGACGT 533182 30 100.0 36 .............................. TTGAAGCTCTACGGATCCTTCGGCCTCGAGAACAGT 533116 30 100.0 37 .............................. ACGAACACGGTTATCACCGGCGACGGTAACAGCGTGT 533049 30 96.7 38 ...............T.............. AGCCCCGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT 532981 30 90.0 35 ...........T................CA ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT 532916 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 97.7 36 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATCTACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCGGT # Right flank : ATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCTCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATTGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCTC # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //