Array 1 193535-193921 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UWJI01000003.1 Hafnia paralvei isolate 341, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    193535	    28	 100.0	    32	............................	TGTTAAATCCAAATCGGAGCCGGAACGTTGCG	
    193595	    28	 100.0	    32	............................	CAAACCTCGCGATCACCAAAGGGGCGTTTTAG	
    193655	    28	 100.0	    32	............................	TGATGACACTTGCGCTTCGTCTGGGCAGAACG	
    193715	    28	 100.0	    32	............................	AACCGCACTCACACATCCTCTAGATTGGCATG	
    193775	    28	  96.4	    31	............G...............	CATAGGCAAGCCACCTATCCAAGAGCAGCGT 	
    193834	    28	  92.9	    32	.......A....G...............	TGGAATGGTTGGAAGTGCTGAGCGAATGCCAA	
    193894	    28	  96.4	     0	............G...............	|                               	
==========	======	======	======	============================	================================	==================
         7	    28	  98.0	    32	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                	       

# Left flank :   AAGTGCTTGGGCGCGTCCCCAAACACTTGTTTCTTATAACTCGAGTTCAATCTAAATATTATTGACGGTAATCCCTGAGCTGCTTTTCAGATTAGGTTTAGCTCTGTGCTATAGATGTGTAAGGTCAAGTTTGAGCTAATGAAGTTTAGAACCGCCAAACAGTATTAAGCCATTGCAATTTCCTCACATACTAGTTATTCATCAGCTTCTTCGAATGTTTCTTCAGGCCATTGGGAAAAATCGGTGCGAGGTTGGCTTCAATCTGCGGTAGATTTTCTTTGGTTTGCTGATCGTCCCATCATTACCAACGAACTGCCCATCTGTTGTGTATGGGGTATGTCTTTTTGTCGAGCGCAGCAAAGTCTAAACAACCCTTTTTTTAGAGCATATTATAACCCATTGTTTTAAAACACATATTATATATGCTCTAAAAAAAAGGGCTTTCAGGGAATTGCTCAGTATTAAGCTGATTAATATAATTTTTTTGTGTATATTCTACA
# Right flank :  AGATTTATCTTGTAAAGGCAAATAGCGGCAGAGTTTATCAAAAATCCTAACTGTTCTTACGCAGATGCTTCCAAGGGCGCGATCATTGAGCTGTTTTATATTTTCACTGACACGGTTTCTATCGGAGAAATCCGCCTCACCTGAGAGAGTAGAGAACAACTTATCAGCTTCCTCTTTGAGAGAAATAGGAAGGTCTTTATTGGGATTTACCCAAGCTAGGTAGGAGAAGTAGACATCACGTACCCGTACAGCTAGCGGATCGCCTGAGGCTGCTAAATGGGTTACTGCTTGTCGAAATTTTTCTGTGGCATATTCAAATTTATACTCGTTCACGCACCACTCCTTGAATAAAAGAAAACCCGCACGAGGCGGGTTTCAGTTACTTTCTAAATGCACGTGCACTATACGTGCATTTCTTCGTCTTACTAGGGTCGTTGTTGTGTCCATCCAATTCGCATAAGTTACTGGTTTTTATGCTCTTGTCCGGTCACTGTCCTACC

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   GTTCACTGCCGTGCAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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