Array 1 275144-275965 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP065380.1 Faecalibacterium prausnitzii strain Fp28 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
    275144	    28	  92.9	    33	..............T........A....	TTCGTTGGCATCTCGGATGCGGGTGATGGTCTG 	
    275205	    28	  89.3	    33	............TGT.............	CACTCTGCAACTGCTCATACGCCTGCTGTTCGG 	
    275266	    28	 100.0	    33	............................	CGACTACAATCCGAACAAGGTCAGTGAGGAAAA 	
    275327	    28	  89.3	    33	............TGT.............	CTACGCCGGGGCCATCCTGACGCTGAACCCGGG 	
    275388	    28	  89.3	    33	............TGT.............	TGCCCCGACCGACCTGCGCGGGCGGCCCATCAA 	
    275449	    28	 100.0	    33	............................	CCTCGCCGTGTCCAGTGGCCCACCGCTCTTTAT 	
    275510	    28	 100.0	    34	............................	CCGTGCCAACACTCAGCCAAGAGTGGATGGGCGG	
    275572	    28	  96.4	    33	..............T.............	TATTCAGCAGACCCCTCCAGCACGGATTCCAGC 	
    275633	    28	  92.9	    33	............T.T.............	CAACCCGATTGAAGTGCAGCAGCGACTTGACTT 	
    275694	    28	  96.4	    33	..............T.............	CCTCCACCATCGCTTTCTTGGTTTCGTCCGGGG 	
    275755	    28	  89.3	    33	............TGT.............	TAATAGAGCCGTTGGCTGGCTCGCCGGAAGAAT 	
    275816	    28	 100.0	    33	............................	CAGTCGGGAACGCTTCTCAGCAGAGCATCCCAT 	
    275877	    28	  96.4	    33	............T...............	CAAGCGGAAATCTATCCGCTCACAGGTGAGTGA 	
    275938	    28	  75.0	     0	...........ATGT........TC.A.	|                                 	
==========	======	======	======	============================	==================================	==================
        14	    28	  93.4	    33	CTTTTCCCCGCCCACGCGGGGGTGATCC	                                  	       

# Left flank :   GCCGCCTCAGATGCCATTGTGGAATACGGCGCTCTCCGTGTGCGGGATGGTCAGCCTGCCGAAGAATTTTCGGCCCTTGTCCGGGGCACGGAACCTCTGCCGGATGTGGTGGCAAAGCTCACCGGCATCACGCCGGAGGAGCGGAGCGGCGGTATGGAGCCGCTGGCCGCGCTGGAGGCGTTCCTCGCATTCGTGGGCAAAGATACGCTGGTGGGCTATCACCTGAAATTTGACCTCGATTTCTTGCGTGCGGCCTGCATCCAGAATGACAGACCCCTGCTTACCAATCGCAGCATCGATGTTTTGCCCCTTGCCCGCCGTAAGGTGTCGGGGGTGATGAACTATAAGCTGCTCACGCTGGCCCGGCATTTTGAGGTTGCCCAGCAAGAGACCCATCGCGCCCTGCCCGACTGCCGCCTGATCCAGCAGGTCTATGCAAAACTGAATGAAACGGGATCGGCCCGCTGATAAAAATGCCGCTTCTATGGGATCTTTTTAGT
# Right flank :  CATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAAATGCAGAGCGAGGAAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCACATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGCGCACGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGAACCCAGAGCAATGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATGTGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCAC

# Questionable array : NO	 Score: 5.37
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCCCACGCGGGGGTGATCC
# Alternate repeat :   CTTTTCCCCGCCTGTGCGGGGGTGATCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.60,-13.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [5-14] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.74   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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