Array 1 297058-296850 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFA01000001.1 Gilliamella sp. Pra-s60 NODE_1_length_337534_cov_190.489348, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 297057 28 100.0 32 ............................ GATTGTTCATCATCAGAAACAATAGATTTTGG 296997 28 100.0 32 ............................ TCTATCTGGAGTGTCGGCTGGCAGAATGCTTA 296937 28 100.0 32 ............................ TTTCATACGCTATAAAACCAACATGTTGGCCA 296877 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 CCTTAACGCCGTATAGGTGGTTTAGAAA # Left flank : GGTAAATCGTCTAACAAAGCATCGTGATAAGTGATCATCTTCTTTGTGGTAAGTGATAAAAGGAGATTATTGTAGTTTTATTATGTGTTATAGGCAATAAGGGATATTTTGATTAAAAAAACAAATAAAGGTTGATGATGATTTTTTCATTTAAAAAATCCAATAAAATCAATACCTTTCCTGACTGTTTTTTTATGTAAAAAACACATAAATTACAATCACACATTACAACCAAACAAAGGTATATTTAATTATAGATTTTATTTTTTGATTTCCTAAATTTAAAAAAATCGTATAAAAATCGGTCAGGAAAGGTATTGATTTTATTAAAGTTTTTTCTGTGCGTTTTTTTGAACACAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAACTCAATAAAATCAAAATATTAGAAAACAGTTTAAAAAAAGGGTTTTCAAAGGCAAAATTGTTGTTTATCTTTATATAACAAGATTTATTAAATCTTGAGTTCTA # Right flank : CGGGCACATTTGGCAACAGCTATGGCCTCGTAGAGGGAGTATCAGGATGATACGAGTAGCGTAGCCGAAGGCTACATTCTGCAGCCTTGCGAGGGTTTTTAGGGGATTTTGCAAAAAATCCCCTAAATCGGACGAGATCACAACAGCTATTTTATCCACCCAAAGCCTAAACGTCCGAAACCATGGCACACAACCCATTTTATGCACTAACAAAAAAGAACTATTTTGATAAAAAAGCGGTCAGGAAAGTTACTGATTTTATTAAAGTTTTTTTGAAAATTATTTTAAGTAAAATCAGCTGTTTATATAAACTCGTATTAATCAATGGTTCAAATAAGAGATAATTTTTCCTCAAATTTTTCAAAATAGTACATCTATTTATTTCATATTTGAAGTTTTTAAAAGCGACATAAGTCGCTTTTAATCTTTGAATTAGTCAGTCCATTTTCCTGTATTAGTTGGTCTATTAAGACTAATCATTGCTTTGTGAGAATTTTGGC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 258-646 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFA01000025.1 Gilliamella sp. Pra-s60 NODE_25_length_14141_cov_223.461725, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 258 28 100.0 32 ............................ CTGCCCCCAAAGTGCAAATACCGAATAATCGT 318 28 100.0 32 ............................ TGTTCGAACTGGATGCTTGAGGCGGTCTATTT 378 28 100.0 32 ............................ CGCATCATTTATGTTGAGACCAAAATTAAAAC 438 28 100.0 32 ............................ GTCTAAGGCTAATACAATATTATCAACGCTTC 498 28 100.0 32 ............................ TGATGACGCAATAGAAGTTAGCGCGGAACTTG 558 28 100.0 32 ............................ CTACAGTCTACTCAGATGATGAGGGCAAAACG 618 28 92.9 0 .....................A..A... | A [639] ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.0 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : TTAGGTCTTTTTTGTGAGTTGTTTTTGTATTAAAAAGCAATGCAAAAATCCCAAAAAAGTGGTCAGGAAAGGTATTGATTTTATTGAAGTTTTTTCTATCCGTTTTTTTGAATATAAACCTCTACAAACCCTTTTTTTTACGATAATTTAAAATTAAATAAAATCAATGCATTAGAAAACAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAACAAGGTTTATCAAATCTTGAGTTCTAC # Right flank : AATAAAATTAATCACATAATTAAAAAACAATCGGCTATGCTATCTGCCTTATTCCGGCGTCAGAATGCGCCGACAACAGAGTGAGGTTAGCACGCCAAACAGGACGTTTGGCGAGTTTGTGGCGCGCTTGACAAATTTGTCTGGAACAAATTTGAACACCTGAGCACAGCGAAGGTGGCCTCGCAGAGGCGAGTATCAGGATGATACGAGTAGTGCCGAAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTCAGGGAATTCGCTTTAATTCCCTGACTCGGACGTGGGCACTGTAGCCATTTTGTTCCCCCAAAGTTCAAACGTCCGAAACCACCGCACCCAATTTATTCTATTCACAAAAACAAAAAAAGGCCTGATTTTCCACTAAAAAATCAGTCAGGAAAACTATTGATTTTATTTATGTTTTTTAAAAAAACTATACCTTATCCCCTTTCAGCAAGCGTCGCCTGCACAATCCTCAACGCATCAAACGTTTCTTT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 147084-146816 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFA01000002.1 Gilliamella sp. Pra-s60 NODE_2_length_317594_cov_198.373073, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 147083 29 96.6 31 ............................A ATATTTCGATTATTGGATTTTTGTACACTCA 147023 29 100.0 31 ............................. GTGCAGAGGGCTCAAGAACAAAATCATTTAC 146963 29 100.0 31 ............................. CGACTATCATTATATTTATCAGTCATCCGCT 146903 29 100.0 31 ............................. GTTGGATGGTTGTCGTGGACTGAAATAGCAC 146843 28 82.8 0 ..................T-..A.T...A | ========== ====== ====== ====== ============================= =============================== ================== 5 29 95.9 31 CCTTAACGCCGTATAGGCGGTTTAGAAAT # Left flank : AACAAAATAGCTACAGTGACAACGTCCGAGCAAAGGGAATTAAAGCGAATTCCCTTTGCAAACCCACGCTTTGGCTACAGAATGTGGCCTTCGGCTGCCCCGACGCCGACGCTCGGTCTTAACGCACCGTTTGTGGACGCGTTCCCGACGCACCACAAACTCGCCAAACATCCCTGTTTGGTGTGCTAACCTCGCTCTGTTGTCGGCACATTCCGACGCCGTAACAAGACAGACAGCATAACCTTAGGTATTTTTTTTGAGTTGTTTTTGTGTTAAAAAACACTGCAAAAACCCCAAAAAAGCGGTCAGGAAAGGTATTGATTTTATTGAAGTTTTTTCTGTCCGCTTTTTTGAATATAAACCTCTCCAAACCCTTTTTTTTATGATAATTTAAAATTCAATAAAATCAAAGTGTTATAAAGAAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAACAAGATTTATCAAATCTTGAGTTCTA # Right flank : AGTAAAGTTAATCAAATAATTAAAAAACAATCGGCTATGCTATCTGTTTTATTCCGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCCAAACAGGACGTTTGGCGAGTTTGTGGCGAGCTTGGAGCGCTTCCACAAACGGTGCGTTAAGACCGAGCGACGGCGGAGGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCACAGCGAAGATGGCCTCGTAGAGGCGAGTATCAGGATGATACGAGTAATGCCGAAGGCCACATTCTGTAGCCAAAGCGTGGGTTGTCAGGGAATTCGCTTTAATTCCCTGACTCGGACGTGGGCACTGTAGCCATTTTGTTCCCCCAAAGTTCAAGCGTCCGAAACCACCGCACCTAACCCATTCTATCCACCAACAAAAAAAGCATCATTTTGATAAAAAATCGGCCAGAAAATGTATTGATTTTATTGAGGTTTTTATTTTTACTCCTAGACGATAAAACAACCAATT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //