Array 1 475612-476861 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGMQ010000002.1 Klebsiella grimontii strain 4928STDY7071401, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 475612 29 100.0 32 ............................. GGCCTTTTATATAATTGCGTTTTCTGTTGCAT 475673 29 100.0 32 ............................. ATGTATGACCGGCTCCCTATCGCCACTAAACC 475734 29 100.0 32 ............................. ATTCATTTCCAGCAAGTCTTCTATAGGCAAAT 475795 29 100.0 32 ............................. CCCATTACATGACCCTCCCCATGTTTCGTAGT 475856 29 100.0 32 ............................. GCTCAGCCCACTTTCAACGCTGATCAAGCCGC 475917 29 100.0 32 ............................. CCTTTAACTAAAAGCGGCCACCTTTCTAAGAA 475978 29 100.0 32 ............................. ATTAAATCATCGGGAGGCAACCCGCAGCCCGA 476039 29 100.0 32 ............................. GGGACCGGATAAATTCGAACATCACTTTCAGG 476100 29 100.0 32 ............................. CGTTTTGCCGTGACACCCTCATCCCAGTAATC 476161 29 100.0 32 ............................. AACCTTAGCCATGATATAAAATTGGTCTTCAT 476222 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 476283 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 476344 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 476405 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 476466 29 100.0 33 ............................. AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT 476528 29 100.0 32 ............................. GTCCATGATGTTGTGTTTTTTCACCCAGCTGA 476589 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 476650 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 476711 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 476772 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 476833 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3645-5687 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGMQ010000010.1 Klebsiella grimontii strain 4928STDY7071401, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3645 29 100.0 32 ............................. ATCGTCTTGCCAGTGTGTATGGCATTGAAGCA 3706 29 100.0 32 ............................. TGCTTCAGCAATTTGTTCATAGAGTGACTGGA 3767 29 100.0 32 ............................. AGTACGGCATGGTTGCCATGATCGACGGCGTG 3828 29 100.0 32 ............................. CTTGCCATCGCTGCACCATCCCGATTGTTTAT 3889 29 100.0 32 ............................. GGATTACGACGTCCCGACAGTTGAGCAGTGGC 3950 29 100.0 32 ............................. GCTACGGAAACGCCATAAACGCCCAGGCTGCG 4011 29 100.0 32 ............................. ATGCTTATCGGTACCCGGGCGGCCTATTACAC 4072 29 100.0 32 ............................. GTAACGAAATGAAATTGCATTATTCGTACAAA 4133 29 100.0 32 ............................. GTAACGAAATGAAATTGCATTATTCGTACAAA 4194 29 100.0 32 ............................. CGTCGTACGGAAATATCTGGTCGTTACCTGGA 4255 29 100.0 32 ............................. GTTTTTGTGACAACCATCAAAAGCGCGGATAA 4316 29 100.0 32 ............................. ACCGATTCCCGGAAAACATCGATGGGGAGGGC 4377 29 100.0 32 ............................. CGGTAAACCGAGGCGATCACGCATTGCCTCTT 4438 29 100.0 32 ............................. GGATTAAGCTGATTCTGGCTGACAGAACAACG 4499 29 100.0 32 ............................. GCTTAATACCAGAGTATGGTAATAAATCCGAT 4560 29 100.0 32 ............................. CCGCCTACCACATCTTTCACGTTGGCCGGAGT 4621 29 100.0 32 ............................. CCGTCAGGCTGCATTTGAAAAGTTGGAGCGCG 4682 29 100.0 32 ............................. ACCAGGTGACTGCGGATAGCCAGTCAGGCAGT 4743 29 100.0 32 ............................. CTCAAAACCGTGTCAACAAAAAAAGTGGAAAT 4804 29 100.0 32 ............................. AATGCGGGCCCGTGGGTTCTGGCTCAGGATGT 4865 29 100.0 32 ............................. CCGACACCTACAGTGAGGTGCGTCCTGCGCAG 4926 29 100.0 32 ............................. TCGGTTGCCGTCTGAATATCAGTAGCAGAACG 4987 29 100.0 32 ............................. ACACGATACGACTCACCAGGTGAAACGGGTAT 5048 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 5109 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 5170 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 5231 29 100.0 32 ............................. TAGTTTACGTTCGAATCCACGCGGCCTGAATT 5292 29 100.0 32 ............................. CTTTGCAGCGCAGTTCCACTACTTGCAGCTCC 5353 29 100.0 32 ............................. CTTTGCAGCGCAGTTCCACTACTTGCAGCTCC 5414 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 5475 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 5536 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 5597 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTTTGCGAAT 5659 29 86.2 0 ............TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.5 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTTATTATTTAGTGTGGCAAAGTCCAGTTCGAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //