Array 1 6054-2792 **** Predicted by CRISPRDetect 2.4 *** >NZ_CXPG01000018.1 Jannaschia rubra strain CECT 5088, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 6053 32 100.0 34 ................................ ATCGCCTTGATGTCGCGAGGCAGGCGGCGAACCG 5987 32 100.0 33 ................................ ACGGGCTGGGTCAAGAAAACCGTGCCCGGCAGC 5922 32 100.0 34 ................................ GTTCCTGACTCGTGTCATCGACCTTGGCGGGGTG 5856 32 100.0 35 ................................ ACCGCTCCGGCCAAACCACACACTATACACACAAC 5789 32 100.0 33 ................................ GACCAGACCATTACCGAGGGCGGCGACACGACG 5724 32 100.0 34 ................................ TCGCCCCTCGACATCATGGCGGTGTCGAACCTGC 5658 32 100.0 35 ................................ GCCCACAAGCCGATGCTGTCCAAGACCCACGCCAA 5591 32 100.0 33 ................................ AGCGATACCTTCGCCAAGGGCGTGATGCGCCGT 5526 32 100.0 33 ................................ AAGGGTGCGTTCGGGGACTATTTCCGGATGATG 5461 32 100.0 35 ................................ GACGGGACGGTCAACACGGGATGGTTTCGGGGGCG 5394 32 100.0 34 ................................ GTCCGTCATGCACTGCGGGCAGGAATAGACCCAG 5328 32 100.0 33 ................................ CCTGCCCGCGTGCCCCTATGGCGGGCAGGCGCA 5263 32 100.0 33 ................................ GTCGCGATAGCAAAAGATGATCGTATCGGCGTC 5198 32 100.0 34 ................................ TTCGATATCGAAGATCGGGGAATCAAGGGCGGGG 5132 32 100.0 33 ................................ GTCCGCGAGCTAGAGGATCGCGCCGACGAACGC 5067 32 100.0 33 ................................ ATGGTCTCGGCGTGATCGGGTCTCCGACCTCCG 5002 32 100.0 33 ................................ ACGACGGAAGGCTATATGGAACAGGTCAACCGG 4937 32 100.0 34 ................................ GCGTGGTCGATGACGACGCAGGAATGGCGCGTTC 4871 32 100.0 34 ................................ GGGTTCATGGTCGGGCGCCGGACCGGGGGCAACC 4805 32 100.0 34 ................................ GGGTTCATGGTCGGGCGCCGGACCGGGGGCAACC 4739 32 100.0 34 ................................ AGATCAGCCGCAGCTAGGAGCCTTCCATGTCCGA 4673 32 100.0 34 ................................ CGTGTGTTGCAGAACGACACGCGGCCGCTGTCGC 4607 32 100.0 35 ................................ TCGTGCCTTGGAACAGGCCCGAAGCGAACTTGGAG 4540 32 100.0 35 ................................ CACCCGTTTGGGGGGGGCGTTTTATCAAGCGGACC 4473 32 100.0 34 ................................ GCCAGGGACACGCGCAGCACAGCGAGCATGTCCC 4407 32 100.0 33 ................................ TTCACGACCGTCTTCGGCCTGCTGATCTGGTAC 4342 32 100.0 34 ................................ CGACCATGACACGATAATAAACCGGACGCTGACT 4276 32 100.0 34 ................................ TGCAAGATGCAACCCAACGCCCGAAATCGGGCGG 4210 32 100.0 33 ................................ ACGCTAGATGTGAAAGTAGTTGCAGGGCAGATC 4145 32 100.0 34 ................................ ATGCGGTCGAGAACGGTCTGTGAGATGATGGCGG 4079 32 100.0 35 ................................ CTGCGCGAGGGCAAGGGGTCGGCGCGGATCCGCAT 4012 32 100.0 35 ................................ GGAGGTGAAGCTATCGAGGTGGATGCAACCCCCCG 3945 32 100.0 34 ................................ GGGATGGTCCACCACGGCAAGCCCGCCGCCGACT 3879 32 100.0 34 ................................ GCTTCCCGCGCAGGCGATGGCGCTGATCGACAAG 3813 32 100.0 34 ................................ GCTCAACCGCAGGGCGTCCTCCAAGGACATTTCC 3747 32 100.0 34 ................................ TTGAGCGACCCCGCGCTGGCGTCGATGGGGGTGA 3681 32 100.0 34 ................................ CGGGGCGACCCCGACAACGATCCGCGTTGCTACG 3615 32 100.0 34 ................................ CTCGCGCCCAATATGCGTCCGAGAACCTGCAAGC 3549 32 100.0 35 ................................ GGGAAGGGGCCTCGCCCCGAAGGCTGGGAACACAA 3482 32 100.0 33 ................................ TTCTAGACCTGCTCGCCCGCTACGTCCGCGACA 3417 32 100.0 34 ................................ AATCCCCCCTGACCATTGCGGACTACATCGCCGC 3351 32 100.0 34 ................................ CAGCCCGCCAGCGCGCCCGCGCCGCCGCCCCACC 3285 32 100.0 33 ................................ GCGTCGAACCGGTCACCGTCCGCGGCGCCCACC 3220 32 100.0 35 ................................ TGGCGAAGTACGCCGCATCAAGCGCGTTCTCCGTG 3153 32 100.0 34 ................................ GGATCCGCCACTACGCCGCTCTCGCCCTCCTGGC 3087 32 100.0 34 ................................ AAGGGCGGCACGGTCCGTCGCTTGCCGCGCGACA 3021 32 100.0 34 ................................ AGGGCCGCCACGGTGATGCTGACCGGGCGGATGC 2955 32 100.0 34 ................................ CTTGGCGGTGCGCTCGGACCGCGACAGGATGGTC 2889 32 100.0 34 ................................ ATTGGCGTTTTCCATGCTGGACCGGATGGCATTG 2823 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 50 32 100.0 34 GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Left flank : GGCACCTGCGCGGCGACCTCGATGCCTATCCGGCCTGGGTGTGGTAGGTGCTGGTCCTGGTGACCTACGACGTGGCCAGTGGGCCCGGCGGCGCCAAGCGGTTGCGGCGCGTGGCCCGCATCTGCGAGGATCATGGCCAGCGGGTGCAATACTCCGTCTTCGAATGCGAGGTGGATCCGGCGCGCTGGACCGCGATGCGCGCTCGGCTGGTCGAGGCGATCAACCCCGCCACCGACAGCCTGCGGTTCTACTTCCTGGGGCGGGAATGGCGCCGGCGGGTGGAGCATGTCGGCGCGAAGCCGTCCGAGGACCCCGACGATCTGCTATTGGTATGATGCGAACCTGGAGCGGCCGTCCGATCTCCTTTGGGTTCGCAAAGCCGCCTGACGGGGGATTTCATAGGTTATGGTGGTATCTATGGGATCCGAGGTACCGCACGACGTGGGGTTCGCAGATCGTCGGATATTCTTGGTTCGCAGCGAGTATGATAGCGCACCGCA # Right flank : GCCGCCAAGCCGCGCGGGATGACTGGTTGGAAACGGTTCGGGCGTCACGGAAGGGTCTGTCCTACCGTTCGAGGCGCCAATCCTGGCGGCTCTGGATCCTCGTGGAACCTCGGGCTTAACACTATTGTCCATAGTGTTAAGCGCATGGAACGCCATCGCTGCACCAAGGGGCAGAGCAGGGGGCTTTCCCGCTTCCGCACTTAACAGTTTTCGGGCATCCTGTTCACATGAGCGAAATGCGCCTCCACGACACCGCCGGAAACCGGCTCTATCTCAACGCCGAGGAACGCGCCGCTTTCCTGGCCGTAGCCCGGCGCAAGCCTGCGCGGGATCGCACACTCTGCGAGACGCTGCTCTTCACCGGCTGCCGCCCGTCAGAGCTGCTGGAGATCACTCCGGCCCGGGTGGACCTGTCCGGCGGTACGGTCGCTATTCGCAGCTTGAAGAAGCGCAAAGATGCCTCCGGCGTCTCGAAAATTATCTACAGAAGCGTTCCGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //