Array 1 309137-307916 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034952.1 Geobacillus stearothermophilus strain B5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 309136 36 100.0 30 .................................... TGAGCGAGATTGCATTTAAACAAAGCATCC 309070 36 100.0 30 .................................... CGCTACACGATGACAAATTACTAGTAGTGT 309004 36 100.0 30 .................................... CTGCGGGGCGTTTTGCCCTTCCGGGTAGTT 308938 36 100.0 29 .................................... AATCCTTACATACAATGCGATCCGGGCGG 308873 36 100.0 29 .................................... CTTTCGCATGTTTCTTCTTCCCCCTTCGA 308808 36 100.0 30 .................................... CTCAAACGTGTCATTTGATTCGCTTAACGT 308742 36 100.0 29 .................................... CCATTAAAAAAAATTTCGATACAGCTTAT 308677 36 100.0 30 .................................... TAGATGCGAACGGAAAATTGCCGGCATCCA 308611 36 100.0 30 .................................... GGTGTTGGTGATGTTACCACCTCTGAAGCA 308545 36 100.0 30 .................................... TCACGGATTGAGCGATCAGGAGAGCGAACT 308479 36 100.0 30 .................................... TGCATATGTTGAAGGTGACATGCTTTTCTG 308413 36 100.0 30 .................................... AGATACAAATAAGCGTCCGCTTGCTCCTTG 308347 36 100.0 30 .................................... TCTTCCGGCGATTCATTAGCAAGCGTGTTA 308281 36 100.0 30 .................................... ATCGCGAATGACATAACCATGAGGGACAAA 308215 36 100.0 30 .................................... ATCTGCGCCATCGCGTGGATATGCACGCAG 308149 36 100.0 30 .................................... AGCAGACTAGGATGAACGCCACCGAGATCG 308083 36 100.0 30 .................................... CAATTCGATGTTTCTTCAGCATGCGCCAAT 308017 36 100.0 30 .................................... CTTCTAGTCTGTTTGACCGTTCGCTCCACC 307951 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : TGCGGCTCAATCAGCACCACCCTCTCGACCAACGGATCATCATGCGATACCGGATGGGGCCGCTGGAGAGGGAAGAGGTGGCGGGCTACATCGAGCATCGGATGAAACAGGCCGGGGCGAAGCATCCGATCTTCACCCCATCGGCGTTAGAAGCGATTGCCCTGCAGTCGCGGGGATGGCCTCGGGTGATCAACACGTTGGCCACGACGTGCCTGTTATACGGGTATCAGCTGAAAAAGGACGCCATTGACGAAGAAATGGTGCGCATGGCCGCAGAGGAAATGGGGTATTAGCACGAAAGGGGCCGAATCGGCCTCTTTTGTGCTTTCTCTTTTCCATCGGTCCATCAGGCGCGCTGGAAATCTTCATCTGAAAGAGCGTGCAAACGTTCCGAAAGAATGTGCAAAATCCGGAACAATCCGCAAAAATTTTGCACATTATTTCCGAATCCGCCTGAAATAATTTGAAAAAGGGATTCTGAAATAATGTGCTAATTTACA # Right flank : AAACGCATAAAACCATTGTCGTCGATCCCCCGGGGTTTTGGCACGATTGGAGGTCGACGACAATGTGGGGCTTGACGGCGAAGGGCCGTCTCACCCCTTCATCCTTTCAATCTTCTCCATCGGCAGTCCGGTCAGTTCGTGGATCGTGTCGACATCGTATCCTTTCGCCAGCATTCTCTTCACCACGTCGAGCTTCCCTTCCTCAATCCCTTGTTGGCGCCCTTGTTTAATACCTTGTTTGATCCCTTGTTTGACCCCTTGTTCGATTCCCTTCTCGATTCCCTTTTCCATTCCCCGCTGTTCGTACGAGACGATGAGCTCCATCACTTGCTTCGCCTCCTTCGTCTCCATTTGGCTCACCTCGTTTCGCAGTTTGACTTCCTCCTCTTCGGACAACCGCAAATACGTTTCAAAAAAACCGAACAACAGCCGCTGTTTCGCCTCATCGAGCTCAAGGCGGACGAGCATGCGCAAAAATTCTTTTTTCACTTCGACCTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 315770-316134 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034952.1 Geobacillus stearothermophilus strain B5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 315770 36 100.0 30 .................................... TCAATGCCTATTCAGGCATAACATACGATC 315836 36 100.0 30 .................................... GGCGCCTGTCGCGCAACAGATTGCGATCCT 315902 36 100.0 29 .................................... CTTCGGAAACTGCCCTTTTCAAATTCTCG 315967 36 100.0 30 .................................... CTCAATGCGTCAAATGCGCCCTCTGCGACA 316033 36 100.0 30 .................................... AACCTTTCCATTAGCGGGATAGATAACACC 316099 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Left flank : AGCTGGAAAGACCAAGGGCTTCGGGCGTTTCTGAGGGCGATGGCGGCCCGAATCGACGGGATTTGGTGGAGAAATGGGCAGTTGGTGGAGGAAGAAGAGACCCGAACGGCGGCCTCGGCCTCAACAAAGTCCAAGCGGATCGAACAGGCCAAACGGAAGGCCGGACGGTTATGGGCAGATGTGGTGCGTCAGAATCTACCGTGTCTGCAGCGGTCATCCGGGACACCGATCCATCAAGCGTTGTCGGCGCTCCGGGATGGTGGTTGGGTGTAAAAAAATGGAATATCGTATCATCGCCTCAAGATGAGGGATGAGAGTCCGAAAGCGCTTACGATATGAATTCCTGAAAATGGTTCGCTAACTAGTGATTGACAACGCCCGTAGTGAACCGAAAAAATGTTCTCCACAAAGTCTTGACTGACTCAAATGGGCGTTTTGTGCTGAAATAAAATGATAATTTACAGTATAATGAAATGGGGGATATTAAAATAATGGTCCGT # Right flank : TACGTATCCAAAAAAGCCTGCAATCTCAAGGATCGCAGGCTTTTTTGCTTTCAAAAAATGCAAAGGCGCTTATGCAAAAAGAGGAACCATTTCTGTTTTTTTTAAAAAAGCGTCAGCTGAGTGGATGTCACTTTCTTTTCTTGCGCCGTTGGTTCCCCAAGAAGCAGCTGCATTTTTGCGTACTGCTTTTCCGTTACGACCATCGCCCGAATCGATCCTCGAGGAGGTAAGTTGCGTTTTAATCTTGCCAAGTGTTTGTCCGTTGCTTCATGTCCGTGGCAGACGCGGCTGTAGACCGAAAACTGCAACATATCGTACCCTTCGTTCAGCAGGAATGTGCGAAATCGCCGGTATTCGCGCTTCTCCCGGTTGGTCACGACGGGAAGATCGAAAAAGACGAGCAACCGCATAAACTTACTCATACACGTGCAGTTGCAACGGGAGAAGTTCCGGCAATTTCAACAACGAAGGGTCTTGGCTTCGGCTTGCCGTGACGAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 3 324706-324938 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034952.1 Geobacillus stearothermophilus strain B5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 324706 30 100.0 37 .............................. AAAGGAAATAAGGAAGTGCATGAAGGGCAGTTTTTGC 324773 30 100.0 37 .............................. TCAGGAGCCTCATTTTCATATCGGGGAACTGGATCAA 324840 30 100.0 39 .............................. GGTGTTTCTTTCGTAACCGAATTGCCAAATAACACTTCG 324909 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 4 30 100.0 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TATTTGCGGCGATCTGAAGAGGAGGAAGCAAAACGGCGAAACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGTGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGTTAAAGCAAGGGATGAAGCAAGGACGCCAACAAGGGATTGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACTGACCGGACTGCCGATGGAGAAGATTGAAAGGATGAAGGGGTGAGACGGCCCTTCGCCGTCAAGCCCCACATTGTCGTCGACCTCCAATCGTGCCAAAACCCCGGGGGATCGACGACAATGTTCTTTTGCGCCAAAATCCTACAGCCATCAAGTTTGAATGTTATTGACAGAATATTTAAAACGTGGTATTCTGGAAACAGCCAAAAGGGGAAAAGCTTGATTTGATGCGCATGGTTTGGG # Right flank : CTTCGGCAGATGATCAAAGAAGGCCTGGAATCCGGGATTAGATTCGGCACAGCGAACCGGGAAATCTGCTTGTGTCTACTAGTTGCAATGAATGAACTGGGGGTGAAGAAACCATGATCACGATCTATGACTTGATCGGCTACATTCAAAACATGGACAACATGGACAAATTGGATGAAATCATCAGTCGATGGTACTTTCAAACGTCTGTCTGGACATCACAGGTGAAAGAAGAAGTCAAAAAAGCGGTGGTCGAAATCCTACAACTAGGCGAACCTAAAGTGTACCAGTTTTTTGTGGATATGTACGGTCTTAAAATGTGAAGTTTTTATCGTACCTATAAAGGGATTGAAACGTCATCCCGGTCGTGACAATTGGAGTTCCTTCTGCCGTTTTTATCGTACCTATGACGAATTTCTCACTGTGAGCAGGATGCCGCCTTGGGGACGGCGAATAGAAAAAGAGAGACCATCAAGGTGAGGTGATTGAATGGCGATTGA # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 1846344-1845786 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034952.1 Geobacillus stearothermophilus strain B5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1846343 30 100.0 35 .............................. TTTTGTGAATACGCAATAAAAGAAACCGTATATGG 1846278 30 100.0 39 .............................. AAGATATTTCTGTTCAGTTGCGAGTGGAGGAACATATCA 1846209 30 100.0 36 .............................. CATTCTTCTTTGTAGAAATTCATTCCGTTTTGAATG 1846143 30 100.0 36 .............................. CAGCGAACCATCGCCAACCCGAACGAATTTACCAAG 1846077 30 100.0 37 .............................. ACCTAATACCCATAAACCGATTCCTTTGCATCCATAT 1846010 30 100.0 36 .............................. CATTCTTCTTTGTAGAAATTCATTCCGTTTTGAATG 1845944 30 100.0 34 .............................. CATCTATTTCCTGTAATTTTATTTCATGGGATAA 1845880 30 100.0 35 .............................. GTTGTCATCGTAGAAGGTACTTGCATAGGAACTAA 1845815 30 86.7 0 ........G.......C....A.C...... | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 98.5 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGGGAGCGCAAATCGCCTACGCTCGGTTTACTGCCTTGCCGCCGCTTGTGTATGTGAGTGTGTTCGGGCGCTTGATATTGTCGCCGCTGTTGGCTGGGTCTTTGATCTTTCTATTAGGAATGGATGGCGTGACGGCTCAGGCATTGCTCATTGCCAGTTCGTATCCATGTTCACGCAATACGGCGCTGTATGCGCTCGAGTATGACTGCCACCCCGATTACGCCGCCCAGGCAGTGCTGGTGTCGACCTTGTTGAGCGCCATTACCGTGACAGGCACAGTATATGCGGCCCGTCTGCTGTTTCCGATTGGCGGATGAAAACGGGGGCAAGTTGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTTGCGTCAAACTCCTACAGCCAACGCGGCTAGACCGTATTGACAGAATTTTTGAAACGTGCTATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGCATGGTTTTGG # Right flank : TATTCCCCCCCACAGCTGAACCACCGCTGAGTTCAGCTTGTTTTACCGCTCGACATAGGAAAAGGACAAATGCGAAATGGCACATGCCAAAAAAACGCGGGGGGAAACAAGAAGGAATTCGGCCGCGAAGGGCGAATACAGTACGGTGAATCCGACATTGCAGGGAGGGAAAACGTGGCGAAGAAGCGAATTGACCATGACCGGTTGTTCAAAGAGCTGCTGTCGACATTTTTTGAGGAGTTTTTGCTTCTTTTCTTTCCCGACGTGTACGAGTACATTGACGTTCACCATCTCTCTTTCCTCTCCGAGGAACTGTTCACCGATGTGACGGCCGGAGAGAAGCACCGCGTCGACTTGTTGGTCGAAACAAAGGTGAAAGGGGAAGACGGGCTCGTCATTGTCCATGTCGAGCATCAAAGCTACACCCAGCGGACCTTCCCCGAGCGAATGTTCCTCTACTTCAGCCGCTTGTTTCAAAAATACCGCCGCCGCATTCTCCC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 1854851-1854350 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034952.1 Geobacillus stearothermophilus strain B5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1854850 30 100.0 38 .............................. TCAAGTTCACTGAAAACGCCAACAACTCCTAGTGTTCT 1854782 30 100.0 38 .............................. TGGAGGGAAATGAGGTCCGCGATTGGCTGGGGCTTTCG 1854714 30 100.0 35 .............................. ACTTTCGATTTTTTGTCGGGTAAGACATAATACTT 1854649 30 100.0 40 .............................. ACTACGGGACAATCGCGTTGGATTGGCAACCGCACTCCGA 1854579 30 100.0 38 .............................. AAATATCAGCCAGCACTGCCCACCAATCTCCAGGATTC 1854511 30 100.0 37 .............................. TTTCGTCAAACCACTCATGGATCGCAAGATAATCCTC 1854444 30 100.0 35 .............................. CATAAGTAGTTAAATAAAACCCATAGCCGGCTTTT 1854379 30 80.0 0 ...............GC.T....C.A..G. | ========== ====== ====== ====== ============================== ======================================== ================== 8 30 97.5 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAATCCGGCGCTGTCCGACGACATCATCCGCGTCGCCCGCTCGCCGATCCGCAAACTTGGACCGAACGACCGCCTCGTCGCGCCAGCCGTGCAATATTGCGCCTTATTCGGCAACGCCCCGCACGGCTTGGCTAAAGGAATCGCCGCCCTCCTGCGGTTCGATGACGACCGCGACGTGGAAGCCGCCGCCCTTCAACAAACAATCGCCCAACATGGAATCGAAGGCGCGCTTCGGCAATACGCGGGGCTTGAAAGTGGGCACCCGCTCGTGGCGGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAACTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAAACAACACGGCTAAACGGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTACGCACATGGTTTGGG # Right flank : ACTATACAGTACAGCACAACTTTTTCTGTTCCCCATGCAGGATTTTCACCCCCTGTTTGCGAATGGATAGAATCGAACACGTTCAAAGAGGGGTGATCGAATGGCCATTGACCATGACCGATTGTTCAAAGAGCTGATTCAAACGTTCTTCGAAGAGTTTCTCCTTCTCTTTTTCCCCGACATCCACGAGCATATCGATTTCCGCCATTTGTCCTTTTTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGCGAAAAATACCGCGTCGATCTATTGGTCGAGACGAAGCTGAAAGGGGAAGACGGGCTGATCATTGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCTATGAGGCCCTTCGCGAGGAACTGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAGT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 6 2357584-2356904 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034952.1 Geobacillus stearothermophilus strain B5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 2357583 37 100.0 35 ..................................... ATCAACTAACCCCTCAATATCAGGGATTTGCAATG 2357511 37 100.0 34 ..................................... ACCAACTGATTGCCCAACACCGCCGCGCCGGTTA 2357440 37 100.0 34 ..................................... ACCAACTGATTGCCCAACACCGCCGCGCCGGTTA 2357369 37 100.0 34 ..................................... TTGATGGTGTCAGCTGGATCGACCCCGAGAAAGG 2357298 37 100.0 33 ..................................... TTTAAAACTGACGCCGATACCATCGGTTACGGG 2357228 37 100.0 36 ..................................... AAAGATATTAGAGAAGCATCAAGTGATATATATGCA 2357155 37 100.0 35 ..................................... GAGAAGGCCTCTCTCGCGCCCGTAGAGGCGTCTTT 2357083 37 100.0 35 ..................................... TTTTCATCCTATTTGGCGCAGTGTTCAACCATGTC 2357011 37 100.0 34 ..................................... CCACAACGCGACCACACCGTCGAAATCGTCCTCT 2356940 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 10 37 100.0 35 GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Left flank : CGATGTAGAAACATTAGAACCAAGCGGTCAAAAACGGTTGCGAAAAGTGGCGACCATTTGCCAAAATTTTGGTCAGCGGGTGCAAAAATCAGTGTTCGAATGCAGCGTTAGTCAAGCGCAGCTAGAAGAAATGGAGCATCAATTGTTGCGCGTCATTGACTTGGAAAAAGATAGTTTGCGGATATATACATTGTACGGCAGCCGGTCAAAGGCGGTTCGTGTCTATGGAAAAGATTATTACGTTGATTATAATGATCCCATCATTTTGTAATGACAAAGATGACAAAATGCCGATGATATGTGCGGCAAGAAGAGAATGATGCGCGAACATAAAGCGATGCTGAAAAAGAAGGGGGATCGCGATGGGCGGAAAAGCTGGTTATAAAGCCGAAGAGGGAAAATGGATCTGTGATCATTATGACTTTGCCCCAAACAGAATGCGTAAGTTCGCGTTTTTATATCTTGAAATGCGCTCAACACAAGATATCTAAACGCGGGCG # Right flank : AAATTTGGTCAGGCCAAGCAGGAATTTGCCGCTTGCTGTCGAATTCATGTTCACGAAAATTGTTGCTTCACCTTTTCCACATCTTCTTGAAACTTCTCATGTGTTTTCGCCAGCACTTCTTCGAAGACGCCGTCGAGCCGCTGTTCGAGGACGGCGATTCCTTCCCCGGTGATTCCGCCTTTGACGCACACTTTTTCCTGCAGCGTCGGGAGCGTGTACAAGTTTTGCTTCAACAATTCCGCGAAGCCGATGACCATGTCGGTCGCCAGCATCGTCGCCTGTTCTTTCGTGATGGCGGTTTTGGCCGCTGCGGCGTCGATGAAGCGTTGCAGCAAATAGCTGAAAAACGCCGGACCGCAACTGGAGATGTCGGAAGCGACGCGGGTGATGGCCTCATCGATATACACCGGCGAGGCGATGCGCCGGAGAAGATCATCGATCGTTTGCCGGCAGTCGGCCGAACAGCGTGATCCGATTGTGATGAGTATGCTGCCGGAGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.40,-15.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //