Array 1 479653-476499 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFP01000001.1 Hippea sp. KM1 D891DRAFT_scf7180000000004_quiver.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 479652 29 100.0 35 ............................. GAGACAGAGGAGACAAAAAGCGTCATTGGAAGGAT 479588 29 100.0 35 ............................. AGACCGCATCGTTCAAATTATGGACAATGCTTACA 479524 29 100.0 37 ............................. GAAGGTTAAGAAAAGCCTTACTGCGCTTGCCAAGAAA 479458 29 100.0 35 ............................. TAAGGACGCATTCACCAGTGAGGACTATCGTGTTC 479394 29 100.0 37 ............................. TGTGTTGTATCTCCTCTATGGCCATTAGCAGGTTGAG 479328 29 100.0 36 ............................. GACTTTACTTTTCATCTGACAGAAACTAAAAATTTC 479263 29 100.0 36 ............................. CAAGGAAGCAGCTGAGCGGTCAGGACAGGAATATAC 479198 29 100.0 37 ............................. ATCGGTTTTGTTGGTGGTGCAGCTGCCATCGTTTACG 479132 29 100.0 37 ............................. TAAAGAAGCTCCCACGGCTTGAGTTCGCAAATGAGTA 479066 29 100.0 36 ............................. CACTTTGACAGCACTTGACAGCAAATTGCCGTCATT 479001 29 100.0 37 ............................. TTGCTAAAAGGCAGGATGTCTGGGCTCCAGGCGACCT 478935 29 100.0 37 ............................. GAGGCTCATTTTGCCGTATTCCCAGAGGATTTGCCTA 478869 29 100.0 36 ............................. CAACAAGAGATATGGCTATAGTCTTAATTGCTTGCA 478804 29 100.0 37 ............................. ACAGTCTTAGTGTTTGTTTTGGGCTGTTCTGGCCTGT 478738 29 100.0 37 ............................. TCAAAAGTGGCAACAGATAGAGTTGGGTTTACATGTC 478672 29 100.0 36 ............................. GCGTCTCTGCATGGCTTTGATGTTTAGATTTTCTAC 478607 29 100.0 36 ............................. GTATTCAAGCAAGTTCTCTTGTCCTCATTACTATAA 478542 29 100.0 35 ............................. AAATTAATGTTGCAACTGAAATAATCGGCGAACTA 478478 29 100.0 36 ............................. GAAGGACAAACATAAGTTACAAGATAACCACATTGA 478413 29 100.0 35 ............................. TTTTGCGTCTGTCTTGCGCCAAAATACTTAAGCGG 478349 29 100.0 35 ............................. AACTTACAGGTATTATGTATAATTTAGCACAAAAA 478285 29 100.0 36 ............................. AAGAAAAAGAACCAATACAGAATAGTCCCTGTCCCT 478220 29 100.0 37 ............................. ATCAAAGACATAGTCTATTCAAAGGAAAAAGGGGTAA 478154 29 100.0 36 ............................. GGCGTAGAATTTACTTTAATTTAAAGTTATTTTAGG 478089 29 100.0 36 ............................. TTCTTTATCTTTGTCTTTGTTTTTACCCCGTGCCTT 478024 29 100.0 37 ............................. GACAAAAGTCGTGAAGCGCTCGGACAAAACACTGCGG 477958 29 100.0 38 ............................. TTGAAGAGTTAAACTTCAACAATCCCAACGAGTTTGTG 477891 29 100.0 35 ............................. TGTTTTTGCAGTATGAAACAGCCTGGTCGTATGTC 477827 29 100.0 35 ............................. GATCAAGAGGCTGCAAAGGCGTTCCTTGCTCTGAC 477763 29 100.0 37 ............................. CTGAGTCTTTTCTTAAATCATCTAAATCGTATGTTTC 477697 29 100.0 37 ............................. CTGAGTCTTTTCTTAAATCATCTAAATCGTATGTTTC 477631 29 100.0 37 ............................. GTGCAGCGCAGAGTTTGCCGAATATCAGAAAATCCTC 477565 29 100.0 35 ............................. CAGACCACTTTTTATAAAGCTCCTTGTCAAATGCG 477501 29 100.0 35 ............................. TCTTTTATGGTTGGGGACATTGAGTTGCCCCTGAC 477437 29 100.0 35 ............................. AATAGCCTGCAGATGGCGTTTATATCTCTGGCAAT 477373 29 100.0 36 ............................. GCGATTATCGTCAATCTGGCTTTAAAAGCCGACCAG 477308 29 100.0 36 ............................. ACACGATCAAGGATGCTATCAAAAATGGTGTCCTGC 477243 29 100.0 36 ............................. CAAAGTGGGGAGAGGCTTATGATGCAACATTCGAGA 477178 29 100.0 36 ............................. TATACCTCACATAAAACTTTACACCCAGCCCATCCT 477113 29 100.0 34 ............................. GACAAGTTTATGGACAAGATCATAGCCCTTGCCG 477050 29 100.0 37 ............................. TAAATACGGGCAAATTAAGAAATCGACCGCCCAAGTC 476984 29 100.0 37 ............................. ACCGCTTCGCTACACGGGGCTATCCGCCTCACTCACT 476918 29 100.0 36 ............................. CCTGCCTACTATCCTTGCGGAATTCGGCTCGAGATA 476853 29 100.0 36 ............................. GCGATTGTGGCTTTGCCCGCCTCTGGCGGGGTCGCA 476788 29 100.0 36 ............................. TCATCTCCCCACCAAAACACAAGGACACGCGCTATC 476723 29 100.0 37 ............................. ACCGCTTCGCTACACGGGGCTATCCGCCTCACTCACT 476657 29 100.0 36 ............................. CCTGCCTACTATCCTTGCGGAATTCGGCTCGAGATA 476592 29 100.0 36 ............................. GCGATTGTGGCTTTGCCCGCCTCTGGCGGGGTCGCA 476527 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 49 29 100.0 36 GTTTTAGCACCCAATCGTGGGATTTAAAG # Left flank : TGCATAAACAATTGAGAAGAAGAGTAAGCTATAGGAGGTTAATCCGGCTTGAGCTATACAAGCTTATAAAGCACCTTTTAAAAGAGAAGGTTTACAAGAGCTTCAGGATTTGGTGGTAGATGTACATTGTTGCTGTTTATGACATATCGACTATAGAAAAATCAGGTCAAAGAAGGTTAAATAGAATAATGAAGCTGTTCAGAAAGTACCTTCACCATACGCAAAAATCGGTTTTTGAGGGTGAGTTGAGCGAAGCAAAATTTTTCTCGCTAAAGAGGGAATCTGAAAAGATAATAAACCCCAAAGAGGATTACATTGTATTTTACAGAATTGACAACCCCCGCAATGTGGATAGAATAACAGTGGGTTTGGATTTCGACCCAACTGATAATTTTATCTAATGCACTACTTGAGGTTGGAGAATTTTCGGAAGCAAAACTGTAAGTTTGATTTTAGAAAAAGCCTTACGCAAAAAGGAATTTCGTTGTTCGGGAAGATGG # Right flank : CACCTTAAAAGAACTTATTAAAGTTTTTATGCGCTTTTTTAATAGAAAAAAAGATGAGGCTTTAAAAGAAGTTTTGCGTTTTTATAGAAATTTTGTTGTTTTTGATGAATTCGCTAAGTATCTACTATACAAAATCGAGGAAAAGACGGCCCTTGATGACAGGACGAGGAGTGAGTTGCTTAAAATATTTCGGAAATTTTATGAAAAAGAGAAAAAGGATGCATTAAAATCTTTTGATGCGGAATACAGCTTTCGGCAGTCTGACGAGCAAGCAATTGCGTTTGTAGATAGTTTAAATGATTATTATCTTGGAAGGTTTTTTCAGGCAGATTCCAGAGTAAAAAAAGAGGTATTATCCTGGATGAGTAAGTATTATCTTAAAAACGGCAACCCTATTGGTAAAGGTCAGAAAGGGATAGCTGAGTTTTTGGATAAGTTCGGTGGTTATCTGTCTGAAAAAAGCGAATTAAAAGCAAGGCAAATAATAGATACCACAATGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACCCAATCGTGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 770393-770886 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFP01000001.1 Hippea sp. KM1 D891DRAFT_scf7180000000004_quiver.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 770393 36 83.3 38 TAAA.A...........A.................. TGATTACCATTCTTGGGGTTCTTGAGTTAATTTTGTTT TT [770397] 770469 36 97.2 49 T................................... CTTGTCAGGAAATGGCTTAGAGAGGCAAAAGAGACAATCCCGGGTGTGA 770554 36 100.0 44 .................................... CTGTTGGTAAAGCCATACACAAGGTTTACAAAGGCGTAAAACAT 770634 36 97.2 40 G................................... TTCCTTATATCTTGATTAGGTTAAAGGAGGTAAAAATGAG 770710 36 100.0 34 .................................... AAAATATAAAAGGAGGATAAGAAATGGTTAAACT 770780 36 100.0 35 .................................... GGCTGCACGGATGAGAATGAATGATGAGGACTCAG 770851 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================= ================== 7 36 96.8 40 AGTCGTAATTCCCTTCAGAAGCGGGAGTAGTGCAAC # Left flank : GAGTGGTGTTAGATAGAGCTGTTTGTTGACATAACCAAGACCGTTAAGGATCATTGCCTTTGTTGCTTCACCGTAGCTTGGGTTCTTTGATTTACTTGATGATGGTATTGCTTCATCTATGGTTTCTTTAATCTTCAGTTCATCTATCATACCGGCTATCAGTCCTAAGTGATCCATGTTCTTGATAACTGCCTTTTGCTGTGTCATTTGAATACCCCCTCTTTTTAGGGGTAGGTGAAAGCATTTTCTGTTCCATTTGTTTTACAACCCTTTTCATTATTTTTCGCTCTGTGCGTTTACTGTGCATTTGGGTTTGGTTAAAATGGAGGTTTGGGTGCGGAAGGGGGGATATAATCCAAAATTTAAAGAAATTTTCCCTTCAAAAGCGGGAGCAACTAAAAATTTTGAATTCTAAATTGTAGATTTTAGATTGGTCGTTTGTGCAAGGATAAAACTAATTTAACCGTAAATCCAAAATCCAAAATTTATAATCCAAAATT # Right flank : CAGGACTTCCAAGAAGCCTATTTGAATAAGGATAAGACTTTATAGTCATATTGTCAACTTTTTGTAAAGCCTTATAAAAACAGCCTTTCCCGCTGTATGAGAAAAAGCCATCATTTTATTGTAAAAGACCACTTTTTGACAGGCTTTTTAACAATATAAAAAACCTGCCTATTTGCGCTTATTCCCATCTTTATGCCATTTATGTTAGAAAGTCAAGGAAAAAATAATGAAAACCAAGCTATACAAAAATTTTTGTTAAACAATAAAACATGTCAAAGATATTGCACACTATCAATTTGCTATTTACCCCTATCTTTACCTTGCAAGCTTGCTCAATATCGGCACAAACGCTTCGATGGGTTTTGGTCAGGTTAGACTAAACCTTCAGACTGGCTAAGTTAAAGACCTTGAAGTAAGAAGTCTCTAAAGGTTCGAAATTGTAAACCTCGATATCGTCGAAGGTTTCAACAGCAACACCCAATCCGAACGCCAACAGGACA # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCGTAATTCCCTTCAGAAGCGGGAGTAGTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 3 1151102-1149970 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFP01000001.1 Hippea sp. KM1 D891DRAFT_scf7180000000004_quiver.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 1151101 37 100.0 38 ..................................... TTTTGCAGTTGACCCTCGAATGTCATCATAACTCACCT 1151026 37 100.0 42 ..................................... ATAAAATGTATGTTTCCAGCTTTCGCTCTGACATTCTGATAA 1150947 37 100.0 40 ..................................... ATTAGATACAAAATAAAACCGAATGAAATGATTATAATAA 1150870 37 100.0 42 ..................................... TCCATCCAGTCCTCTACTTTCGGAGCGTCTACTTCAAATGTG 1150791 37 100.0 40 ..................................... ATTCTTTTTTAAGTTCCTATAGAGTGTGAGAATAGAAGTT 1150714 37 100.0 35 ..................................... ATAATCAAGCCGCTGCAGAACCCATATTTGAACCA 1150642 37 100.0 41 ..................................... CTTTCTCTATATAGTTATCTGGTTTGTCTTTCAGTAGTAGT 1150564 37 100.0 45 ..................................... GAAATACTCGTTGGGTTTATCTTTTAGCAATAACTTCGACAGAAC 1150482 37 100.0 45 ..................................... CTGCGTTGCTATACATCGGAGCTGTTCGCTTAATAAAATTGACAA 1150400 37 100.0 45 ..................................... GAGATATTTCGCCTCAACGAGCAGTGTTCCGACGATTAGACCGGA 1150318 37 97.3 46 ........G............................ GAATGCCACATAATCTAGATGATGTCCATTCAACTCGTATTCAACT 1150235 37 97.3 42 ...................G................. GTGTACTGAGGAGCAGACCTTTTTATGAAATTGATTAGTCTC 1150156 37 97.3 38 ...................G................. ATCTTTAAACCATTTCCTTAGCTGTTGCGCAACAAACT 1150081 37 97.3 38 ...................G................. ATTCCATCATCCCAGAAATATACGTTAATCTTAGTCTT 1150006 37 83.8 0 ........G..........G...........AATT.. | ========== ====== ====== ====== ===================================== ============================================== ================== 15 37 98.2 41 GTCGACTGAGGAGTATGTTAAATGGTGATTTCGAGAC # Left flank : AGTGAGTTTATTCAGAAACACATTACACCTCCTAAAATTGTGTTTTTACTAAATTCTAATCCCATAAACTAACCCTGTCAAATACTATCCCCACCTCTGTTGATTCTCCAACTTTTTTACCCCTTATTTTTTACATAATTTCGTTATCGCTTCAAAAAAGTTGGAGAATCCCATATTTTTGTCTTTCTGAAAATCGATTCTCCAACTTTTCGATTTTTGCGATTTTTGGATGTTAATTTGACGCCATTTTCTAAGGGGTGTTTTTGCAAAAGTTGGAGAATCGAGGGTTGTTTTGTATTTTACAAGGTGATTCTCTAACTTTTTCAAAAGTTAATTTGTTGTCATGACGCCAATATATGGAAATGACATGCCCAGAATGCAAGGTTTGAAAATGAATTTAGGCATACATTCTCCAACTTTTTTGCATCACTGCATAGAAACAACAAGAGATATTGATTTGAAAAAATCGGTAATTTGCATTATGCTTAGTTATAACATCA # Right flank : TCCCCGATTTTGATATTTGTGAGATCTATTGACTATTGGGATTGAGTATGCAAAATAGTGATATGGTTTTCCTATTAGGTGGCAGAGATTTGGAGATGTGCGCCATAAAGAGGATACTAAAAAAGCATGGCGTTAAGTTTATCGACAAAAACCTTGAGTGGGGCGCAAAGATTAGTGCATACAAGTCAGAGCTTGAGCAGTTCAAAAACCAAACAATTTATGCCGTAGAGCTTGAAAACGACCTTAACATAAAAAACGGCAATGTTGTTTTTATAGACCACCACAACGATAATTCAGATAAACCCTCAAGTATTGAGCAGGTAGCAGTGATTTTAAATCATAAATTAAGCAGATTTGAATATGCAGTTGCGTTGAATGATAAGGCTTATATTAAGGCCTTAATGAACGAGGGATTTGGCATGGCTGATATAGAAAGAATAAGAAGGCTGGATAGACTGTGCCAGGGTGTGTCAGAGCAAGAAGAAGAAGCGTCAAAGAGT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACTGAGGAGTATGTTAAATGGTGATTTCGAGAC # Alternate repeat : GTCGACTGAGGAGTATGTTGAATGGTGATTTCGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 4 1158608-1156992 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFP01000001.1 Hippea sp. KM1 D891DRAFT_scf7180000000004_quiver.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 1158607 37 100.0 39 ..................................... TTTTTTAATAAAATCAATAAATCTTTGTCTCGAGATCTC 1158531 37 100.0 41 ..................................... GTCTAACGGCCTCATTCAAAACACCTCCTTTAGTTTATTTT 1158453 37 100.0 39 ..................................... GGATTGTTGTTATAGCAGTACCCACGTAGAATCCATATT 1158377 37 100.0 46 ..................................... TTCGTTTCCTCGTCCAGCTCTGTGGATCCAATAATGGCTCCGAACA 1158294 37 100.0 44 ..................................... AATACAACAATTTGTTTAATAACATTACAACATCATCAACTTTT 1158213 37 100.0 43 ..................................... TCGATCCTACGAAGCAAATATTTCAACTCTATCAAGATTGTTG 1158133 37 100.0 41 ..................................... TTGCTATAATCCCGTAAGGGACTTCACCAAGTGTTTTCTTC 1158055 37 100.0 39 ..................................... ACTTGGGTGATTTTAGGGATAATATACATAGCAATCATT 1157979 37 100.0 45 ..................................... ACCACGTCTGTATAGTGTTCCTCTTTGACTTTTTGCAGTTGACCC 1157897 37 100.0 44 ..................................... AGATGTAACAACTCCTACATAGAACCCTGTCTTGAACCATTTCT 1157816 37 100.0 42 ..................................... TTGATATGCTCTCTCCCAATCCATATTGAGGAATCCGTTAGA 1157737 37 100.0 38 ..................................... ATATCAGGAGGCAATTTGTCAGTGGTAACAAGAACTTT 1157662 37 94.6 42 ........A..........G................. AAGTTGACCAAATCCCCCAGATGCTCAAACTCCTTGCTCCAG 1157583 37 94.6 44 ........A..........G................. AAGTCTCAGCATCCGTAAACTGTGGAGCAGTTCTTCGAATGAAA 1157502 37 97.3 44 ........A............................ CTCAATCCTATCCCCGAGAAGGCTTGAGTCCTTCTCAAGGGTTT 1157421 37 91.9 39 ........A..........G........A........ AGTTTTTGAAGTCCAAGTAAGAAATCCTCTGCTCTAGAA 1157345 37 94.6 43 ........A..........G................. GTGTCTGGACGGTCGATATTTGTCAACTCGTCCAGAAAGAGCA 1157265 37 94.6 42 ........A..........G................. TTTTCTCAAACTAAGTAAGAAATCCTCTGGTCCAGAATACAT 1157186 37 100.0 40 ..................................... GAATTCACCATTCTGACACCTCCTCTAAAATTTTATTCGA 1157109 37 100.0 44 ..................................... ATAAAACCTATTTTTATAAAGAGGAGCCTCAAAGAAGACAGCGG 1157028 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ============================================== ================== 21 37 98.3 42 GTCGACTGGGGAGTATGTTAAATGGTGATTTCGAGAC # Left flank : TAGGTTTTACCACATCTGCAAAAGCTGTGTTGAAAAATCATTTTTACTTCATTCTAATGGCGGTGTTTTCTGTGGTTTTGATGGTTTTGTATAACGGTTTCGATTCTCCAACTTTTTTACCCCTTATTTTTTACATAATTTCGTTATCGCTTCAAAAAAGTTGGAGAATCCCATATTTTTGTCTTTCTGAAAATCGATTCTCCAACTTTTTGATTTTTGCGATTTTTGGATGTTGATTTGACGCCATTTTCTAAGGGGTGTTTTTGCAAAAGTTGGAGAATCGAGGGTTATTTTGTATCTTACAAGGTGATTCTCTAACTTTTTCAAAAGTTAATTTGTTGTCAAAACGCCAATATCTGAAAATGACATGCCCAGAATGCAGGGTTTGAAAATGAATTTAGGCATACATTCTCCAACTTTTTTCTATCACTGCATAGAAACAACAAGAACCATTGATTTGAAAAAATCGGCAATTTGCATTATGCTTAGTTATAACACCA # Right flank : GGTTGAAGCAATGTGCTGTTCAGCCACAAGTATTCATAGGAGGTGCAAAATGAAGACTGCTGTGAAGATAGCAATTATTGTGACTGGTGTTGCCGGTCTGATACTTTTTAGAATTAAATATCCTGGTGCAAAATCACCAATTATGATGTAGCGTAGACTAAAGAGTACATTGAATGGTGGTTTATCAGCTATACCCCAATTTTCACATACGGAAAGAAATTAGAATACTTGAGTGTTTTGTTATATTGATTGAGGGAGAAATAATAAAAAAGGAAGGAGTGGAAAACAATGGGCTATCCCGTGTTTTCCACCTATTTTATCGAGGTAACTCTGACTATTTGAATTTTATTTCGAGCTCTATTTGAGTTTCTCCTTTTCTGCCGATAATAGATTCAACATTAGTTATAACCCTACACTTTTAAGACAATCTATTCTACTTGTTACTTCGTTCTTTTCACTTTTTAGTGATAAAATTTCAGTCTCGAGCTGCTCTTCTATAG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACTGGGGAGTATGTTAAATGGTGATTTCGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //