Array 1 29134-27519 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGQT010000024.1 Klebsiella grimontii strain 4928STDY7071507, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 29133 29 100.0 32 ............................. TACATTGGGTGAATGCATAATAGAACGTCGTG 29072 29 96.6 32 ............T................ GACACCCCGGCAAGTCTGGGGACTGAGCGCCT 29011 29 100.0 32 ............................. GCTACGCTCGCACACATCACAACCGATATTGG 28950 29 100.0 32 ............................. TATTGTGCAATACACATAATTTAGCTGATCTT 28889 29 100.0 32 ............................. GCTGATTTATCAGTATCAACTCCTACAGATGC 28828 29 100.0 32 ............................. CGGTTGGTCAGCATACGAGCGATCACGCGAGC 28767 29 100.0 32 ............................. CGTCGGCGGTCAGTTGGGAAGTCAAATAAGCT 28706 29 100.0 32 ............................. TCTATGCTCAGATAATTGCAATCCAATTTTGG 28645 29 100.0 32 ............................. ACCTTATCGAGCAAGGAGGTACGCTCGCCAGT 28584 29 100.0 32 ............................. TTCATTGAGATACATTAAAGAGCATTAAGACC 28523 29 100.0 32 ............................. ATAACGTGGCCAAGAAAGCCGACGCCTCAGCA 28462 29 100.0 32 ............................. CATTTTTATCCCTTCATGGGGGGTATGAGTTA 28401 29 100.0 32 ............................. TATTTATTGTGGTTTGTGGTTAAATTTTAATC 28340 29 100.0 32 ............................. AACTGCGCCTTTAAACGGGCCGGTCCGTACCT 28279 29 100.0 32 ............................. GGGTTTTATTATCTGTAGTAATCTCTGTTGTA 28218 29 100.0 32 ............................. CGTGATCTGCGTGGGTATATCCGCGAAGCGGC 28157 29 100.0 32 ............................. TGATCAGCAAGTACGGCAAGCCAGCGCAATTG 28096 29 100.0 32 ............................. CTGCCGCTCCTGTCCGGGCCTATCGGGTGGAT 28035 29 100.0 32 ............................. GTGTAGCCTTCTGTCTCCAGTCGAGTCCGTAA 27974 29 100.0 32 ............................. CGGGCGCACGCTCGATACAGACAGCCATTTAA 27913 29 100.0 32 ............................. TCTTTCAGTCCTAGCTGTTTCCGATACGCATC 27852 29 100.0 32 ............................. TGTAACCCGCAATAAACCCACCGCATCACCCC 27791 29 100.0 32 ............................. CCATCCTTAAAAATGAACTGATACCAAAACAC 27730 29 100.0 32 ............................. CAAATGGCGATTGAGTCAAAGGGCGCGTCAAA 27669 29 100.0 32 ............................. GCAGATACCTCCTGCCCGATACTGTCAGTCTT 27608 29 100.0 32 ............................. CTGCTGTGCCTTGGTGTCGGAGCTCTGGATTA 27547 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.9 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 60917-60231 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGQT010000010.1 Klebsiella grimontii strain 4928STDY7071507, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 60916 29 100.0 32 ............................. GTGGTCAACGAGTGGCTAGGAGAAGAGGTGAT 60855 29 100.0 32 ............................. CTCTGGATAGTTAAAACACCCTGGGCGCGTCG 60794 29 100.0 32 ............................. CGAACGTAGGTTTCGTCCCAGGCGTAGCTGGG 60733 29 100.0 32 ............................. TACAACATGCTGGCGCAGCGGCATACCATCAG 60672 29 93.1 19 .........................TG.. CATAGCCTTGATCGCTTTC Deletion [60625] 60624 29 100.0 32 ............................. CGTAACGCAAATTCAGGCAGATTATTTAACCC 60563 28 96.6 32 ............-................ ATTGATCGCGCTTTCTCGCGCATCTCAGAAGA 60503 29 100.0 32 ............................. ATTGTTCAGGTCATCAATCAGCTGATCGTGGC 60442 29 100.0 32 ............................. ATTGTTCAGGTCATCAATCAGCTGATCGTGGC 60381 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 60320 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 60259 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.6 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCCCCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //