Array 1 2442-1149 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVEV01000006.1 Fusobacterium necrophorum subsp. funduliforme strain F1248 NODE_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2441 30 100.0 38 .............................. TTTTTTATCCGAGATTGTTTAATTCCGAATGCAGAATA 2373 30 100.0 37 .............................. TCTTTGACATCCCAAGCGTGGCTAAAGGCTACAAATA 2306 30 100.0 37 .............................. AAAAAATAAGCAAGATACCCTGAAATTGAAACAAGCA 2239 30 100.0 38 .............................. ACTGTTGCTCCGATTATGGATAATATGAGGATTAAGTA 2171 30 100.0 37 .............................. ACAAACGCTATTTATATTAAAATTTACAACATCACCG 2104 30 100.0 37 .............................. TATAAACCGGACAGCGTAAACTCTCACTGGAAGAAGA 2037 30 100.0 37 .............................. AGATGGTAGAATTTCAGAGAGTGAGAGAAGAAGACAA 1970 30 100.0 36 .............................. ATCTTGTTTTAGTCACTAAATGCCCGTACTTGTCTA 1904 30 100.0 35 .............................. TAAATTTTCAAAATGTGTTAATTTTAATTTTTTTA 1839 30 100.0 37 .............................. CTCATCCAAGCGACACTTCCAACATTTGCTCGAATAG 1772 30 100.0 36 .............................. GGACAAAACGTAGGAAGGTTGTGATTTTTATGTTAA 1706 30 100.0 36 .............................. TTTACGAATACAGCTGAACTTAATTCGTCTTTATAA 1640 30 93.3 36 ...........G........A......... AAAAAAGAAATCGGTATTTGTATGTTATTTTCTTCA 1574 30 96.7 36 ...............A.............. TGGTAAAAAATCAAGGAGGTAAAAATATGAAAAAAT 1508 30 96.7 35 ...............A.............. CCTGATATTGTAAATATCAAAGCAATTTCTTATGA 1443 30 96.7 37 ...............A.............. TGGAATTTTTCCTTCTTCTAATGACTTAATGACACTA 1376 30 96.7 35 ...............A.............. TGAGGTGATTGATGAAAGCAATCTAGTCAATGCAA 1311 30 96.7 35 ...............A.............. ATGGGCAAGGAGGAATCTTATTTCGAAAAAACTTG 1246 30 96.7 37 ........................A..... TTTCTTACTATCTGGAAACATGCTATTTTTTCAACAA 1179 30 73.3 0 ..C........TT....A.TT...TA.... | T [1157] ========== ====== ====== ====== ============================== ====================================== ================== 20 30 97.3 36 ATTAGAGTATTACTAGAGTAGAATGTAAAT # Left flank : GGTATCGTGGCTTATTAAAGAAATGTTCTTATATTTTTGTAGTTTTAGTAGGAGCTACTTTAGACCGTGTTTTGCTAGAAAACAATATCAAGATCCCTGTTTCTTTTTTCGGAAATCCAGCCTCTTTTAAAGTCTTACTTATTTGTAAAATAATAGGGACGGAGGGAATTTCTATCGTAGAGAACCTCGCAGAAATAGGATTAAAGTTCCCTCTATCTATAAGAAAGTTATTTAAACAGCTTCAACAAGATGAGTCTAGCAAGAATACTCCTAACGAGAAAAAAGAGCCTTAAACGGGCTCTTATTTTGTTGAAAAATTTTCCTTTAAAAAATTATGTATAAAAGAAGTCCTTAGAAAAATATAAGGACTTTTTATGATATAATAAAAAATAATGACAGAAAGATAAATTCTCAAACTGAACATAAAAATAATTCTCAAACTAAGTTCAAAAATTTATCAAACTGTTTTTCACCGTACAACAGTATCCCAAGCTTCATGG # Right flank : TTGAACTATAACTAAAAAAGAGGTAAAAATGTTATGTTGGATTAAAAATCTGCAATATATGGGTTCATTATTGAAGATTGTTTGAGAGTTTCTTTTGAATTAAAAAAAGGGAGCTTTCATTGTAAGAGAATACGTAAGGATATGGTACACATAATCAGGTTACTGGAACTTCGTCCGACGACATCACCGTGATGTTGACAACTTTAGATTCCTTAAAACAAAGTGAAAGACAAATTAATATGGAAGATATGAAAAAAAGATTTAGTAATTGTACAAATGACGAGATTGACAAGAGTTCAGAAATTACACATGTTCACTCTATTTCAAAAGAAGCTTGCAGAATTTATGTGGAAATAGTGAAAAGTCTGATTATAAATAAAAATTTAAAAGACATCTTAGAGAATTTGGAATGTACAAAAAATTTTCAAGATTAAAACATCTCGATACTTTGTAGGAAGAGCAATATATTATGAATGCTTTAGGAGGTAGTTTGTGATGTG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTATTACTAGAGTAGAATGTAAAT # Alternate repeat : ATTAGAGTATTACTAAAGTAGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 40038-38609 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVEV01000006.1 Fusobacterium necrophorum subsp. funduliforme strain F1248 NODE_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 40037 30 100.0 37 .............................. TATCTTCTGCTAATTGCTTTAATTCCTTAGCTTTTTG 39970 30 100.0 37 .............................. CAAAAAGCCTACTATCATCTATTCCAGTCCATTTCTT 39903 30 100.0 36 .............................. AAAAATTAAGGAAGGTACAGAAAAAGATGTGTATAG 39837 30 100.0 36 .............................. GCATTGATAATCTTCTACTGTTCTTGTATCTACTTT 39771 30 100.0 36 .............................. AAAAAATAGTTAGCAGATGTGGTTACATATACAGTT 39705 30 100.0 36 .............................. AATAGATACATGGATGAAGAGTTTTGGAAGTTTAGG 39639 30 100.0 36 .............................. AAATATACATTCAGTATAAATTGCTCTGGAATTGCA 39573 30 100.0 36 .............................. GAAAAAGTAGGAGTATCAATGTCTGCATCTAAAGCA 39507 30 100.0 36 .............................. TATACATCTGGAATTATCTCAAAACAAGCTTGGTCA 39441 30 100.0 39 .............................. TTTGTATACACTCTAGTAAGTCTGGTGGGATTTCATCTG 39372 30 100.0 38 .............................. GATGATAGAACACCAGATTTTCAATTTGATTTTATATA 39304 30 100.0 37 .............................. AAGGTAAAACTATATTGCTCTACATCTCTTCATACTA 39237 30 100.0 37 .............................. ACTTGAAGGTCTTCTAATCTAGCTCTTAACTCTTTGT 39170 30 100.0 36 .............................. ACTATTAGACCTCGAGTTCGACAAATTCTAAATGTT 39104 30 100.0 37 .............................. ACCAAAACAGGTAAATGAATTTATCTCAAGTCAAAGA 39037 30 100.0 36 .............................. TACATTCAGTATCCACGTTCACGGGAGTTTGGCGGT 38971 30 100.0 39 .............................. TACACTTGAGGTAATATATTACTATCAAGCACAATATTA 38902 30 100.0 37 .............................. AATGCAAGCGGACATCGGTTATACGTCCGCTCGACAG 38835 30 100.0 35 .............................. ACATTGGAGTGTTTATGGAAATATGGTTTTTCTAG 38770 30 100.0 36 .............................. AAGTTGAACGAAGATTTTATAAAGTCGGATACGCCA 38704 30 100.0 37 .............................. TTTTTATGACGGTATAAAAAATGTATATTCTGTTTGG 38637 29 83.3 0 ......................-...GGGG | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 99.2 37 ATTAGAGTATTACTAAAGTAGAATGTAAAT # Left flank : TTCCAAATGTGGTGGTGATAAAATATGTATGTAGTAGTTGTATATGATATCTCTTTAGATGAGAAAGGGACTTATCATTGGAAAAAAATTTTTCAAATTTGCAAACGATATTTGCATCATATTCAAAACTCTGTGTTTGAAGGAGAACTATCGGAAGTGGATATTGAGAGATTAAAATATGAAGTATCTAATTATATTAGAGATAATCTAGATTCTTTTATTATTTTTAAATCTCGGAATGAGAGATGGATGGAAAAAGAAATGTTAGGAATACAAGAAGACAAAACAGATAATTTTCTGTAGATATTTTCATTGTCGACCTCTCATAAGGTAAAAATCCCAGGACATTGACAAAAGAATAAAAGAACTTGATTTTCCAAGAAAAAAAGTAAAGATAGAAAAATAAAAAAGGGTTTTCTTTTAATTTTTTTTATAAAATAACTTTATCGACAATTATAGTCAAAAAAAGTTATAGATAGCAATGTATTTTAAAGTCTCGT # Right flank : GGATATATAGTTTGAGAATTAAGAGAGAAGAAGAGAAAAAGATAGAAAAGTATTGATATATATAAGAAATATTTGAATAGTATTCGAATAAGTGTCGAGAATAGTATGAGAATCTATGAGAAAAAATGATACAAAAAATGTGAAAATGTGCAACGATAGTGAGAAAAAATGAGAATATTCGATAAAATTATAAAACTTGTTCGTTAGGGGCTTTTGAAAGCTCTTTTTTTATTTTTTGAAAGAAATAGCACTGTGCATTTTTTGAAGAAATGACATTTTTAAAATTTTTTGCACAGTGAGGAAAAGTTACATAAATTCAGAGAAAGCAAAAAATCACTGCACAAAGAAAGACTGCACAGTGATTTTTTTAGGAAGAATTTTTATAATTTTCTCAACATTTCAGAAAACAAACATAATAAAGTAACGTAAGTTTTTAAAATATCCTTTATATTTCAAATCAAAATCAACTAGTGAGGAAATCCTCATATGTTGAAATGATA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTATTACTAAAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //