Array 1 153239-157952 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYA01000002.1 Ignatzschineria ureiclastica strain KCTC 22644 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 153239 28 100.0 32 ............................ AAACCTTGATTCCGCCATCGTCACGAACAAGC 153299 28 100.0 32 ............................ TCATTTACGATGAATTTGCGCTTGATCTTAAA 153359 28 100.0 32 ............................ ATCTGTTGATCGCTTTACTACATCGCCCTTAA 153419 28 100.0 32 ............................ TCAGGTAAAGCATTGAAAGATATGACTTCTAC 153479 28 100.0 32 ............................ TAAAAATTAATCTGTGGCAGTGCTAAGCATCG 153539 28 100.0 32 ............................ GGCAAATTGCTGACTTGTGTCGAGTACAGGCA 153599 28 100.0 32 ............................ ACTCGATCTCTGAATCGATTGTTACAAGTGAG 153659 28 100.0 32 ............................ CTTCGCTTTCCACGATAAAGAGCCATCTTCAA 153719 28 100.0 32 ............................ TGACATTATTTTAGTTATTGTTGTCGGGCTAA 153779 28 100.0 32 ............................ TCCGGCTTTAGACCTCTAGAAATAATCGATAA 153839 28 100.0 32 ............................ TACAGAGAATGCCTGATGATCAAATTAGAGTA 153899 28 100.0 32 ............................ AGTTTAAATTGCCGTATTTCTTTTTGCCGTCG 153959 28 100.0 32 ............................ GATCTTTTAGAACCTTACACTAATCGAAAAGA 154019 28 100.0 32 ............................ TTTTTGATTAGCTCCTATGGTTGCCCTGCAAA 154079 28 100.0 32 ............................ TCTTTCAAGCCCCAAATGAGCGACTTTTTGAG 154139 28 100.0 32 ............................ GATAATCAAGGGCGGTCGAGTAGAGTCAGGTC 154199 28 100.0 32 ............................ TGAAATGATCTTTACGGGATGGGCTGAGGGTG 154259 28 100.0 32 ............................ GTATGCTAGATCAACGTCTGATTGCTCGCCCC 154319 28 100.0 32 ............................ TACAGGCACACCGCAATAGAGGTCAATATGAT 154379 28 100.0 32 ............................ TTGAAGTGTTCATTCTCAGTCGTCAACATGGA 154439 28 100.0 33 ............................ AGTCAGACAGTTCAGCCAATCTATTATCCGCGA 154500 28 100.0 32 ............................ TGTCGTTTTCTTAATCGGCAAATCATCAATTG 154560 28 100.0 32 ............................ AAAAATCATAAAATCATAGATAAAGCGCTTAA 154620 28 100.0 32 ............................ TGATAATTCAATGCCGGTCGCATCTTTCACAA 154680 28 100.0 32 ............................ TAAAAAAAACTGTGCGTTTTGCGCATTAGATA 154740 28 100.0 32 ............................ TTAATCTTCTCTTCTTGACCTGCTGCGATTCT 154800 28 100.0 32 ............................ ACTTTGGTGCGGGAATGTTCGGGGTTTGCTTT 154860 28 100.0 32 ............................ TTTTGATTGAATTGAGCATCCAACAAAAGGGT 154920 28 100.0 32 ............................ TCAATGTTTAAATTCATTCAATGAAAATACTT 154980 28 100.0 33 ............................ CAGTCTGATTGTTGATCTCATAATCGAGATCTC 155041 28 100.0 32 ............................ TAAATGTTCCGCCTGTTCCCGTAATTTTTTGA 155101 28 100.0 32 ............................ ACAGGATACGGTTGGGCAAGTTCTCAATTAAA 155161 28 100.0 32 ............................ TGAAAAATATATCAATAAAGCGATTAAATTTA 155221 28 100.0 32 ............................ GTAATTCTCTTCATCTTGACCGGTTAGGTCAT 155281 28 100.0 32 ............................ AAGTAACAAACATTGCATAACATATTGATTTA 155341 28 100.0 32 ............................ TGAGATCTATGTTCAATATATTTTTCAAACAT 155401 28 100.0 32 ............................ AATTTATCATCGCTTTGGAATGTCGTTTTGAT 155461 28 100.0 32 ............................ AATCCCGCCACCTAAAAGAGAAAACGCCGGAA 155521 28 100.0 32 ............................ AGCGATTTTCTGCACCAATTCATCAAGCGTCA 155581 28 100.0 32 ............................ TTTTTGGGCTTCTTCTTCAGCTCTTTTGATTA 155641 28 100.0 32 ............................ CATAATATGCTCACCGATCAGGCTGACTTCAG 155701 28 100.0 32 ............................ TTTCAAGCGCTCTAATTCCTCTTTGCCAATCA 155761 28 100.0 32 ............................ AAAAAAGGAAAAGATGACTGGCTTTATGAATT 155821 28 100.0 32 ............................ TAGATACGATGTTCATGCAAGCGCAGGTCATG 155881 28 100.0 32 ............................ AATTCGGACGGGGGTTCGCGGGACGTGATTTG 155941 28 96.4 32 .....G...................... GGCTGGTGAATGATGTTCGCCGGTCATGTGTA 156001 28 100.0 32 ............................ ATTTCTTCAAAGAGCGGCAGCATTTCATTTTC 156061 28 100.0 32 ............................ AGAAAAATGATTGATGAATTAAAAGCCTTAAT 156121 28 100.0 32 ............................ AATCGCTTACACTTCTAACGATTTTAGTAATG 156181 28 100.0 32 ............................ AGAAGTGAAAGAAGATCCGCGAGGTATTGCTA 156241 28 100.0 32 ............................ GCACTGGGTTATTAATCAACTAATCGAACTGT 156301 28 100.0 32 ............................ CTCATCATTCTCTTTCATCAAATAGCGCTCCC 156361 28 100.0 32 ............................ ACACCGCTATATTGCTCACGATCTGATACAGA 156421 28 100.0 32 ............................ ACACCGCTATATTGCTCACGATCTGATACAGA 156481 28 100.0 32 ............................ GTCTACGCTTGATCTTGCAAAAGCGGGTGATG 156541 28 100.0 32 ............................ ATTTTGCTGATCTCCTCTGTTTGCGGGGCAAC 156601 28 100.0 32 ............................ CTGAAAGCACAGATCCCAATGCACAAACGCCG 156661 28 100.0 33 ............................ GTTCTTTAGTATTTCTCTTATATGCACTATGCT 156722 28 100.0 32 ............................ GAAAACTGAGCGAATCAAAGGACTCACGTCGA 156782 28 100.0 32 ............................ TTTACGATCTCTCTCTCACAAATTCTGATGCA 156842 28 100.0 32 ............................ ACAGAATAGCGCTCTGCATCTGCTTTAAGCGC 156902 28 100.0 32 ............................ AAGAAGTTGCTTGTGCGAGCAAAGACTTCAAA 156962 28 100.0 32 ............................ GGAATGTTACGACCGTCCACAGTTGGACCCGA 157022 28 100.0 32 ............................ AATACGACTCCCAAGGATTGTGGTTCCAAATC 157082 28 100.0 32 ............................ TAAGCGCAGTGACTGAGCTTTTACAGTCTGAG 157142 28 100.0 32 ............................ GCATTTAATTGCGCTAAACGGCTACGAGGTCA 157202 28 100.0 32 ............................ AAAACATCACAATAGAAAATGTGAGCTTGCAT 157262 28 100.0 32 ............................ GTCGCCGTTAAAGGCAGAGGGGATGACAGGTA 157322 28 92.9 32 ..........GG................ AAACTTTCAAACGCCATTAGCTGACTTTTCAG 157382 28 92.9 32 ..........GG................ TGCGGAAAGCCCAGGCATTGAGATCACGCTTA 157442 28 92.9 32 ..........GG................ ACCCGTGATCTCTTGATTCTTTAATTTCATTC 157502 28 92.9 32 ..........GG................ TTTACCGCTAAAAAATTTCACGATCATTTATA 157562 28 92.9 32 ..........GG................ ATTCAGGACTTGCAGTCATCATATATTCGACC 157622 28 92.9 32 ..........GG................ AAAAAGCGAGCAACTTAGCTCAATGGGGGAAA 157682 28 92.9 32 ..........GG................ CAATTGCCCACACTGAAGATATCTTATATATA 157742 28 100.0 32 ............................ GCTTCGATCGTGGGTTCTCGTTCTGTGCATTG 157802 28 89.3 32 ..........GT.C.............. AACGGGAACGTATCGAAGCAGATAGAAACATT 157862 28 92.9 32 ..........G..C.............. GCTCGTAAGACCTCTTCTTAGGAAGAGGTTTT 157922 28 75.0 0 ..........GA.C...TTTT....... | TAA [157944] ========== ====== ====== ====== ============================ ================================= ================== 79 28 98.8 32 GTTAACCGCCACATAGGCGGCTTAGAAA # Left flank : GATCGATTATTAGATTCTGTACACATTCAATCAATTAAGGAAATCCCCACTAAAATTGATGGTTATGCGAAATATCTTTATTGCCGACCAAAAGGTGAATCTCGATTGAGAAAAGAGAAGAGGGAATATGCTGAATACTACGCTCAATTACATTCAATATCTGTAGATGAGGCTCTGACTCGGTATGATGATTGGGAGTTTAAAAAAGTCTATTACCCTTATATTCAGATGAAGAGTCTTCATCGAGATAATTCATTTAAGCTTTTTGTCAAAAAAGAAGTTGTGCAAGAAAAAAATTTAGAAAATAGCACTCATCAGCTATTTACAACTTATGGTTTATCTGCTGGGGGCATTGTTCCTGAGTTTTAACCATTATTTTTTGCTCTTTAAAAAATTGGATATAATTCAGTAGGTTATAAGAAAGGGAGAAATCATTAGTTTTTTAGGGTGAAATACTCAAGAAATTAGAATTTCTCCCTATTTTGAGCTTTTAATCTATA # Right flank : AATCCCGCCAATTGGCGGGATCTTTTTATCTCTATGTTGGATATGAGAAATTCTGATTAATAGGAAAGTATATTAAATCTTTTCTGCCATAATTTCAGCAACATCATTTCCCCAAACAGGGACTTTACCATCGGTTTCAAAGAAGAGGGTTTTATATTGCATTTTGAGCATATAAGGAATACGACCCATTTTGAGAACCTGTGTATCGCCACCAAACCAAGAGTTCGAGCGAATGTAGAAGCCTTTGCCGCTTCCAATATCACCAATACAAAATACCCAAGGTTTAAGGGTTTCATTGGCTTTTTCTGCATCCATTTTGCCAAGATCCAATGCAACTTGTCGGCCGATGATTTCACATTGTTGATGGCCGATAGCCCCTAGTTTTGGCATGGTAACTGCAGCACAATCACCGGCAGCGAAGATGTTTTTGTATTTTGGATTACGCATTAAAAGGTCAGTAATAATAAAGCCTTGATTATCACTAATCTCTAAACCTTTTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCACATAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCACATAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 198527-198141 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYA01000003.1 Ignatzschineria ureiclastica strain KCTC 22644 sequence03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 198526 36 100.0 33 .................................... GATGTGCGCTTCTGTTACTTTAGGCTTTTTACT 198457 36 100.0 35 .................................... GGTAACCTTTAGGTCACCCTTAAACTTATTATGTT 198386 36 100.0 34 .................................... ATAATTATGGAACTGAGATACATAGTCCCAATAG 198316 36 100.0 34 .................................... CGATAGCATCAGTTTGTAACTTCTGCTCACGGCG 198246 36 100.0 34 .................................... CCAATGACGTGCGAACACGTCACCCCAGAATTCA 198176 36 94.4 0 ...............................G...T | ========== ====== ====== ====== ==================================== =================================== ================== 6 36 99.1 34 GTCAGAATCATGCCCTGTTTGAAAAGGGATTAAGAC # Left flank : TCAGATTGTTCAATACAATAAATTCAAGCAGGCGAAGTACAAATAATGATTCTAACTCAGGGCGTAACCCTGATTTCATATCAAGAAGATCCCGGCTAAAGTTATCATGTAGATCACTTTTTTTGGGATAGTAGGTAAAGGAAGTACCGGCCTTTCTATAAGACGCAATATTTAAAGCACGAACTCGATTCATTGTCATACTGCATCTCCTATCTAACGATTGATTAATAATCTTGATTAACTGATAGCTAATGTACGTTAATAGTAGGCAGAAAAGATAAAGTACAAATTTGCCAATCAGTAAAATGCGATAGGATAAAAATTTTATAAAATAAGTAAGGCTGTTATAATGACCGAGATTCATTGATAAATGACCGATGTGAAAAATGTCTCAGGATAGGGATCGTATATGTTATCCAATGTCATCTTTTGTAAATTTGTAAAGATTGGAAATGGTTATTGTAACTTATTGAAATATAAGGTTAAATTTTAATGGTGCG # Right flank : AAAAAGAAAGCCATCATAAGTTTAATTATGATGGCTTTTTGTTGTCTGAAATAAGAAAATTAACCGCATCGCCGGGGCGAATGATCTCATTCTTTTAGCAATCGTGTGCCGGCAGTTGTGGCGCTTTCGCGCCGGGGAATCTCTTAAGTTTCGGGATTTGCTTCATTGCCGAGTGATTGAGAATCATTCATCTGCGGGCGCTCGGTTGCTCTGGAGTTGCAAGCATTCTCTCCCGCNNNNCGACTTTTCATTAGAATGAAAAATTCTTAAAAATTTTCCTACATCTCAAAAGTGGGTACTATCTTTCTGGTTATAAATGTTCCATAAGAAAATTAACCGCATCGCCGGGGAGAATGATCTCATTCTTTTAGCAATCGTGTGCCGGCAGTTGTGGCGCTTTCGCGCCGGAGAATCTCTTAGATACTGGAAAGCTCAATTACTCTAACAGTTTCAAGGGAGAATCTTGAGGAGGGGAGAGTTGCTGATAGAGTTTCGACATC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAATCATGCCCTGTTTGAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 202093-201711 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYA01000003.1 Ignatzschineria ureiclastica strain KCTC 22644 sequence03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 202092 36 100.0 32 .................................... ACATCAAGTGATACGAAGGTTTCTTTGTCTTC 202024 36 100.0 34 .................................... TCCACATTCACATCCCCATCCTCGTCAAAAATAT 201954 36 100.0 33 .................................... GATTCCTTTGGAGCGTATACAACTGACGTTCCT 201885 36 100.0 34 .................................... TCGGTCGCGAGCTTCTGCTCACGGCGAGAACGTT 201815 36 100.0 33 .................................... TCGATAGTTTTGCTAGACCCTGCTGGGATTTCC 201746 36 97.2 0 ...............................C.... | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 99.5 33 GTCGGGATCATGCCCTGTTTGAAAAGGGATTAAGAC # Left flank : TAACGGAGCGAAGAATATGAAACAATTTTTAGTCTCTTATGATATATGTGAACCTCGACGTTTACAGCGTATTCATAAGTTATTAAAGGCGTGGGGAATACCGCTTCAAAAGAGTGTTTTTATTGTGGATAGCTCGCGGGATATTGTGCAATTAAAACAACTATTGCTAGAAACAATGGATCAAAGTGAAGATGACATTCGTTTGTATCCTATTTTTACAGAGAGTTTAGTTTGGGAATGGGAAGATAAATCGATATTAGAAGGGATATTACTCTGTTAGGTAAAGGGCATTAAATGCATTGGTAATCCGATGTTGATATTGTTATAATCAGTCACTTATTGATCTCTGATCTTGGCAGCATTGTAATAATGATAATTTTTGATGTTTTCTATTAGAAGGGTGTTTGGGAATGTTATCCAATGTCATCTTTTGTAAATTTGTAAAGATTGGAAATGGTTATTGCAACTCATTGAAATATAAGGTTAAATTTCAATGGTGC # Right flank : CTTTAAGTTAGAGGGATGTGTGTTCCCTCTTGTGTCGGGATCATGTTTGAAAAGGGATTTATGCCTATTAATCTCCCCCAAAGATTGGGGGATGATCTTCCATTGATGTTCTATCTTTTGAATAATTTAATCTGCTCGAAGAGATTCGAGTAAGGTCTTTGTACGCCTTTATTATGAGTTTTTATGTGCAATCCTGTTTAAAAGGGATCGTGGGGAATGCCCCAATTGGATTAAATTTTGAACTGAAAGGTAGTTAATATGAAGATAAGAGAGATCTTAGGTGTTTTAATGATGGTTTTGCTATTGGCAGGTTGCATGTCTGCAGCTCCGAATTATATTAATGGTCGCTACTACATGGCCGGAGATTCAGATTGTAAGCGAGGGAGCGTGAATCAGTACGGTAATTTAAACTGTTATAATTCAAAAGGAGAATATACTGGATCAAGACGACCTATCTCTGAGATGCAAGCAAAAGCCTGGTATGATAGCCAAAATAGCTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGGATCATGCCCTGTTTGAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 155983-155323 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYA01000004.1 Ignatzschineria ureiclastica strain KCTC 22644 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 155982 36 100.0 32 .................................... CGAACACACACAGGTATCGAGCCAACGTGGCA 155914 36 100.0 33 .................................... TTGTTCTCTACGTGATCTTTGTTGCGCCAATTC 155845 36 100.0 34 .................................... GCTGTTGTTTTGAATGTAGCCATTGTGAACCTCC 155775 36 100.0 33 .................................... GTGATAACACCGCCAGTTACTGTATCAGCAGCG 155706 36 100.0 32 .................................... ACTTAGATACTACATTGAGAGTAGAGTTAATA 155638 36 100.0 34 .................................... GACCTCCTTTCATATAATCAAGGGTTTCTATAGT 155568 36 100.0 34 .................................... AACAGATACATCTTCAATGTTACTTTCGTGAGTT 155498 36 100.0 33 .................................... TCATATTCCCATAGGCAACGTTTTACGTGTTTT 155429 36 100.0 35 .................................... AAGGTATCCTCTACCTCTTGGTAGTAGGACTCATC 155358 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 10 36 100.0 33 GTCGGGATCATGCCCTGTTTGAAAAGGGATTAAGAC # Left flank : CATTACAATTGAAGTCATTAATATTGGACATCGAAAAGATATTTATAAATAACGTGGAGTACCTAAACCCGTTCATCTAATTTAAGAATTGATCCCACCGCCGGAGCAAATGACCTCGTTCTTCCGGCAATCCCGCGCCGGCAGTTGGGCGCTTTCGCGCCGGGAAATATCTTAAATGCCGGGATCTGATTCATTGCCGAGAGATTGAGAATCTCTCTCCCGCGGGCGCGCGGTTGTGCTGGTTGCGCGATTATTCCCTCCCGCATGGAATGAGCTTTTGATAAGATCCACAGAAACCTTAGTAATTTCCGTTAATATTGCTATAATACACACTTTAAAGATCCCTAATCTCGACGATCAGATACTAAAATGTTATTTTTGATAAATCCATACAAACAACGGTGATTATATGTTATTCAATGTCATCTATTGTGAATTTGTAAAGATTGAAAACAGGTGTTGTAACCTGTTGATATTAAAGATAAAATTTTAATGGTGCG # Right flank : TCCCAATTCTCCTTGACAGCTTTCGACTTATCACGTCGGGATCATGTTTGAAAAGGGATTAAGATAAAAAGAAAGCCTTCATAATGAAGGCTTTTTTATTGTCTGAAATAAGAAGATTGACCGCATCGCCGGAGCGAATGACCTCGTTCTTCCGGCAATCCCGCGCCGGCAATTGGGCGCTCTCGCGTTGTGAAATATCTTGAATGCCGGGATCTGATTTATTGCCGAGAGATTGAGAATCGCTCTCCCGCGGGCGCGCGATTGTGCTGGACTTGCAAACATTCCCTCCCGCCGTGAATGAGCTTTTGATAAGAATGAAAAAATTTCTAATCTTTTTCCCACATATAAAAAATAGATACTATCTTTATAGTTATAGATATTTCATAAGAAGATTTATCTCATCGCCGGAGCGAATGATCTCGTTCTTCCGGCAATCCCGCGCCAGCAGGCTTGGCATCTTGAGTGCCGAGAGATAAGAGGATTTATCCCACCGCCGGTAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGGATCATGCCCTGTTTGAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 157522-157226 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYA01000004.1 Ignatzschineria ureiclastica strain KCTC 22644 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================ ================== 157521 24 100.0 44 ........................ GCGATAGTTGCTTTAGAGAGTTGTTTTAAGTTGTCGGGATCATG 157453 24 100.0 39 ........................ CAATCAAATCTTTTATTGGGTTCATTTCAAGAGTCGGGA 157390 24 91.7 48 T.A..................... TTAGGGTTGTTTGTGGTCATCCCTAACATTAGATTAGTCGGGATCATG 157318 24 100.0 45 ........................ GGTAGAGATAGTTGTAAGACCTGCATTTACAGTGTCGGGATCATG 157249 24 95.8 0 .......................T | ========== ====== ====== ====== ======================== ================================================ ================== 5 24 97.5 44 CCCTGTTTGAAAAGGGATTAAGAC # Left flank : CTCGCCCGCCTCTAACCGAGTTGTGCTCGGCGCTAATTTATAGAGCCAAACAATCTTCTGAATCTCATCAGTCAGCGCTCGCTTGAGTTCCGGCGTTAATGTCAGATGTTTCAGTAACGCTTCTTTGGTTAAAGGCTTCTGATAGAGCGCATCTGTAGGATATTGAAAATAGGCCATCTGCTACTCCTTTGGCATCACAATGCACATGAATAATTTAAAATGATCTACCACTTTTACCCTACTCTGATTAAACATCTGAACTCCCCTCAAATTGATCCCCAAAGATTCGGGCATAGGCGATATAATCTATTTTTTAATAAATTGTCATAATTTTAACTGAATTTAAAATAATTTTCCCACATCTCAAAAGTGGCTACTATCTTTATGGTTATAGTGAGATTCTAAGAGGGTTTATTTCACCGCCTGGAATGAACTTTTGATAAGATCCACAGAAACCTTAGTAATTTCCGTTAATATTGCTATAATGACTCATAGTCACG # Right flank : AAAGAGAAAGCCTTCATATGAAGGCTTTTTTATTGTCTGAAATAAGAGGATTTATCCCACCGCCGGAGCGAATGACCTCGNNNNNNNNNNNNNTGGACTTGCAAACATTCCCTCCCGCCGTGAATGAGCTTTTGATAAGAATGAAAAATTTCTAATCTTTTTCCCACATCTCAAAAGTGGGTGCTATCTTTATGGTTATAGTGAGGTTCTAAGAGGGTTTTATAATTCCTTAGGCACCGACTTCTTTTTCTCCATTGTCTTTAATATTCAATCGCACTACAATGTAATACAATTAGTATTGGAGGAATCATTATGACAGTAGTCAGTGTTAGATTAAATAAAGAAGAAGAGCGGATTTTTAAAGAATATGCCGCTTTTCATGGTCAAAGTTTGTCATCCTTATTTAAAAGTAGCGTGATTGAAAAAATGGAAGATGAGCTCGATTTAAAACTGCTCAAAGAAGCGATGGCTTACAATGAAAAACATCCCGAAACCTATAC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTGTTTGAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 165346-164206 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYA01000004.1 Ignatzschineria ureiclastica strain KCTC 22644 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 165345 36 100.0 32 .................................... CTCTTCGACTTCTACCCTGCTGTTGCGTGCAG 165277 36 100.0 32 .................................... GTGGCAAGTGCATCAGTGGCAAGTTTCTGCTC 165209 36 100.0 32 .................................... CGCATCAACGCGTGCATCCACTTCTCCAACAG 165141 36 100.0 34 .................................... AGTTTTTGCTCTCTACGTGAACGCTGCTGAGCAA 165071 36 100.0 33 .................................... GCCTTGGGATAATTCATATTCCCAAAGACAACG 165002 36 100.0 32 .................................... AGGTACCCCATATCATCACAGTCTTCGTATAC 164934 36 100.0 32 .................................... ACTTTAGTTACCACAGTGGCAGAGCTAGCCAC 164866 36 100.0 34 .................................... GACTTTAAGCCATTTACCTGATTTGTACACTGCG 164796 36 100.0 32 .................................... AGATTTTCACGCGTCTCTCAGCTTCCGCTGAA 164728 36 100.0 33 .................................... TTATTACTTCTACGGGTTTCCGCAGACTCTTCC 164659 36 100.0 34 .................................... GGAGATCTGGTTACGAACGCAGATCAACCGTAGT 164589 36 100.0 34 .................................... ACGTTTCTTCATACGTTCAAGGAAAGAAGAAGAT 164519 36 100.0 32 .................................... AATATTCTCTAATGTAGGTAGATCTTTATATA 164451 36 100.0 35 .................................... GCTTTATCCTTGCGGGATTTCGCCAAAGATTTGAG 164380 36 100.0 33 .................................... TTCCCAATCCAATGTGTTGCGTTATACAACGAG 164311 36 100.0 34 .................................... AGATAAGTCTGTAGTGGTTTCTACAGCAGTTATG 164241 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 17 36 100.0 33 GTCGGGATCATGCCCTGTTTGAAAAGGGATTAAGAC # Left flank : GTTTGAGAAGTTGAGAAACTGCTCCCCCGCGGGCGCGCGGTTAGCGGTTGTTCTGGACTTGCAAACATTCCCTCCCGCCGTGAGTCTGCTTTATTAAGAATCACTAAGAGAATTTATCTCATCGCCGGAGCGAATAATCCCGTTCTTCCGGCAATCCCGCGCCGGCAAGTTTGGCATCTTGAATACCGAGGTTGTTTGAGAAGTTGAGAAACTGCTCCCCCGCGGGCGCGCGCTTGTTCTGGACTTGCAAACATTCCCTCCCGCCGGGGATGAACTTTTGATAAGATCCACAGAAACCTTAGTAATTTCCGTTATTATTGCTATAATAAACACTTCAAAGATCCCTGATCTCGACAATCAGATACTGAAATGTTATTTTTGATAAATCCATACAAATAATGGTGATTATATGTTATCCAATGTCATCTATTGTGAATTTGTAAAGATTGGAAACAGGTGTTGTAACCTATTGATATTAAAGATAAAATTTTAGTGGTGCG # Right flank : ACTGAGTTGTAAGTAGACTTCTTAACTTTAGAAGTCGGGATCATGTTTGAAAAGGGATTAAGATAAAGAGAAAGCCTTCATTATGAAGGCTTTTTTATTGTCTGAAATAAGAGGATTTATCCCACCGCCGGAGCGAATGACCTCGTTCTTCCCGCAATCCCGCGCCGGCAGGTTTGGCATCTTGCATGCCGGGGTTGTTTGAGAAGTTGAGAAACTGCTCACTCGCGGGCGCGCGGTTGTTCTGGACTTGCAAACATTCCCTCCCGCCGTGAGTCTGCTTTATTAAAAATCACTAAGAAGATTTATCTCATCGCCGGAGCGAATGATCCCGTTCTTCCCGCAATCCCGCGCCGGCAGGTTTGGCATCTTGAGTGCCGAGATAAGAGGATTTATCCCACCGCCGGTAAAATAACCTCGTTCTTCCGGCAATCCCGCCGGCGTTGTTTACTTTGTGCGGGGCAATAAAAATCCCGCGGTGGGCGGGATTTGTGGGTTTATTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGGATCATGCCCTGTTTGAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //