Array 1 276-40 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHP01000022.1 Paenibacillus terrae strain NRRL B-30644 contig00022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 275 32 96.9 37 ............A................... TGGAGCAGAGAAAAGCGAGGCGTACAGCGCGTACAGC 206 32 96.9 34 ............A................... GTCGGGAAACATTAGAGGTCGGCCAGAGTACGAT 140 32 100.0 37 ................................ ACGAACCAAGAATGGAGAGAAAAGTCCATCATTGATC 71 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 4 32 98.5 36 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : TAACACGCCAAACGATCAGCGAGCATGTACATACGCAACGTATTAAAACCGCCATCTACATGCTGACCGAGTCCCGACTGACGATTCGTGAAATTTCAGAGTATGTGGGGTATAGTGATGTTTCCTATTTTCATCGGATATTCAAACGGCTTACAGGCTGCTCCCCATCCGAGTTTCTGGATGAACGGTCTTCGATTGTCTAGCTTGTCTTGTACGGTGGAAAGAGAAGGCGGTAAAAGGATGGAAAAGGTTGCGAAACTTCGTACTTTAAATGTATGTTGGATGCAACTGGATAGACAACAGTTACCACATTTTATAAAGTGCGAATGTGAAGCTCACATAAAAACCCCGGTTCCTTCGCACCTCGAAATTTGTCGAAAAAGGCTTGGATGGGTTGTGATGGGTGAATGTCAATGCTTGATTCAAGCCTTTTCGGCATCGTTTATTGCGAAAATGTATGATATTGATACCATTAGGGTATAAATCACTGCATTTTCGCT # Right flank : TTGTTTTTCCTTGTCTGTAGTGTCCATTTAGTCGTCGTGT # Questionable array : NO Score: 8.78 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCCATATGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 57958-58396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHP01000023.1 Paenibacillus terrae strain NRRL B-30644 contig00023, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 57958 32 100.0 34 ................................ TACCATGGCAAAGCAGGGCGGCAGCGGAGTGATG 58024 32 100.0 36 ................................ CATCATTTCATCAATCCAGGTCGTGGTGTAGCTCCA 58092 32 100.0 38 ................................ AAGCTGCCTTTTGGCTTTCAACGTCATCATTCTTTTAA 58162 32 100.0 37 ................................ AGTTGCAGCTCACCGATGCCAGGATGCTGAATAGCAG 58231 32 100.0 36 ................................ CGGTTAGATCATGATCGGGAGCAGCGGGAATTAATT 58299 32 100.0 34 ................................ CTACAACTCACGTACGGCTGTCAGCGTGACTGTT 58365 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ====================================== ================== 7 32 99.6 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GATGAGCGCCGCAAGACTGTTCTGTTGCCGGTTTAGCTCACGCTCAGAAACACGCGGATAATGACAGCCATAAGAAGGATGGGCGCAGTGGGATCAACAGGATATGTTCCAACCTGTAGGGGATACCCTCGCCATTTCGCATATAAGCAGAGTAGTTCTCATTTGAGTTTAGAAGGAGTGCAATTCATCTCCTGCATACACCGTAAAGGACCAGGTCACTCCAAGCTGCAAGCCGTGCTGAAAACGAGCGAACAGCAACTTGTTACAGTGCTGCGTATTATTTCATATTGTTTGGAAGGATACAGAAGGCAGCGAACTGGTGCGAACCTCAAGCTCACATGAAATCCCTGGGACATTCGCACCTCAGATTTTGTCGAAAATATGTCGAATGTGAACATGTTGTGAACGAATGATGCTCCAAACTTATTAATTCTGATGTCATTTGGTCCAAAATGCGCTAAGATGGGCTTAACTTAAGCTCATTTTACCCATTTTTCGCT # Right flank : TGTCATCGGCTCGCTGTTCTGTTTTCGTTGTTGGTCATGTCTCCTGTCCCATAGTGACATTATCACAGAAAAACAACTACTTACATAAACACCCTCTTGAAATAGCTGCAAGTTTCATCTATAATGCTGTAGCATATAGTAATACTCAAGGCATTGACCAAAGACATGATTTCCTTGAAGGGCCGTTCAGAGAGAAAAGACGAGGCTGAGAGCTTTTCCGGCAACCGCATGTGAAGTTACCCCTTTGTAGCCGTGACGTTGAACATGTAGCTGTGTAATGTGGCAGTGACATCAGTAAGCGCCTACCGATTTATCCCCGTTAACGGATACCAATGGAGGGTCACGCATGTCGTGCATGAACATGTTTAATGAACATGAATGTAGGCACAGGAGCGGGCCGAACTAGGGTGGAACCACGAGCTGAACGCACTCGTCCCTTGAGGGAGAGAGGCGTTTTTTTGCGTTCAATTTTGATATATAGCATGCAACCTTACAATTTG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 14010-13775 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHP01000037.1 Paenibacillus terrae strain NRRL B-30644 contig00037, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 14009 32 96.9 36 ...........T.................... GGCTATCTCTGCATCCTTTTGTTGTATAAGGGATTC 13941 32 100.0 37 ................................ TCGCGCAAGCTCTTTCGAGCCGCGTTCAGGCCTTCCG 13872 32 100.0 35 ................................ AAGATGTAGAATAACTCTATCTGTCCAAGCACAAG 13805 31 84.4 0 ...........T.........A.-......GC | ========== ====== ====== ====== ================================ ===================================== ================== 4 32 95.3 36 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TTTTCATCTTGTGCTAAGGGAAGCATTCCATCATTCACATAGGTAATTAAATCTTTTTTTACCGGATCGGTAGAGCAGGCTGCCAAAATGGAAAAGCAACATAATACCAACATAAATACGCTAAGTTTTTTCATCTGTATTCCCCTTTTTATGTATGTTATGGGTAATTCGATGTGCCTTGTAGTCAAAAAGAACTATCCATATCATTTTATTATATCGTATAAATAAGAGAATGGTAGGGTTTTTATGGTAAAATAGTGTCGAAACTAAGTTAATTGATCTGCTCATTAAAAATAGGTAACTATATGGAAGCCGATTCGGTGCGAACCCCAAGCGCACATGAAAATCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGTGTTGGATTGGCTATTTATCCATAAAAGTCAATAGTTGATCCAAGCTTATTGGGCATCAGTTTTTACGATAATGTGTGGAATTGATATCGTTAGGGTATGAATTACTGCATTTTCGCT # Right flank : ACAGCGCTCAAAATAACTTTTTACGTGTTTTGCGAAAAGTACATTATGTGCGCTCAAGCTGTGTGCTCAAGTTTTTTAGCTTGAAACTCGAAGGCCCCCTTTTAATTAGGGGAGCCTTTTTCGTCGTGATTTTTAGGATAGAAAAGTAGACAAGGATTTTCAGTGCTCTGTCCACTGCCTCAGGCATGCTTCCGAAAGCGGTGACTTAATTATCACGGATTACAAATAAGAATATTTGAAGAAGTATATTCCATTAGAACCAGAATTGTTTTATGATAGAGATAGACAGCTTAGAAGTTTTCCGGATTTATCTGGAAATAGCGGAAATTTAGTAAAACATTCGAGAGGGGATTTCAGTATGAACAGGTTCAGAAAGGCAACTTCGGTGTTGCTAAGCACAGTGCTCCTGCTTTCTTTCGGGATGACTGCAAACGCGAGTCAAAGCACAGAGGGTAAAACGGGACAAGCGATTAAAGCGGAGTCCAATTTTCAGCTAACAA # Questionable array : NO Score: 8.62 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 12612-12101 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHP01000105.1 Paenibacillus terrae strain NRRL B-30644 contig00105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 12611 33 100.0 37 ................................. TTCAACGCTCGACTGTTTCAATTCCGAAAGCAGGTAC 12541 33 100.0 37 ................................. TGACGGTTTCTACTGTCCTTACCGAACAGTAGCCAGA 12471 33 100.0 34 ................................. TTGAGCCTTTGCAAAATGTGTAATATTGCTCTGA 12404 33 100.0 33 ................................. AAGTCCGGTCAGTTGAGGAATTAAACACCATCG 12338 33 100.0 36 ................................. TACATGGACAAGAAGGACAACACATTCCAGGTGGTC 12269 33 100.0 36 ................................. AGATGAGGCAATCTATGAGAAGTTCGCTGTAAAGCC 12200 33 100.0 35 ................................. TTCATATTGGGTTATAAAAAATTAGTAGCAGAATC 12132 32 75.8 0 ..........A....-..A.T.....A...CTC | ========== ====== ====== ====== ================================= ===================================== ================== 8 33 97.0 36 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : AACGTAGTAAAAACGACTATAATACTAGGAGATAGTCAATATATTTCGAGGTGAGAATGTGAAGCTCACATGAAAATCCTGCGAGCTTCGCACCCCAGATTTGTCGAAAACATGTCGATTGAGGTACGCTAAATAATGCTTAAATAGGGTCGATATGAACCATGATCTTGTAATTTTAATTACGTATAAATTAGAAGAGTTGATCGATTCAAAAGAAGTCAGCCTTCGATACCGCAATTTAGGAGATAACTAAAAAAAGAAAGTAGAGTATGTGAGGGCAAAAGAGTCTTAGGATATGGAAAGCCTGCTGATTCTGTAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCTCGAAATTTGTCGAAAAGGATTAGTATTCACTTTCTATAATAGAAGTCAAGGGTGGATTCAAGCTTTTTCAGCATCGTTTTCTGCGAAAATGTATGGAATTGATATCGTTAGGGTATCAATTTCTGTATTTTCGCT # Right flank : TGGTGATGCTTGGTTACAGAAGCTCTGCTGCTGCGAGCTGCTTGAGCACTGGCGGCGTAGCGATAAGAGGGCCTTTCGACCTGTTGCCTTTAATATAAGCTTTGACCTTGCGGGTATAGTAAACAACGCCTTGACCCCCCAATAACTGGATAGCCGCTCATGTCATCAGTTAGTGAAGTTTGTACATGTTTGCCAGTGCTGCTTGGCATGTTTCTCATCGTGAAGATGCAGGATGCCTTCTGAATCCAAAAATGCGAAAGGTGGTAGTGTAGTAGACATGGTTCATGTCCTCCTAATATGGTATTTCGAAAAATCAAAAAGGCCGACACATTGGCCGACCTGATCACTGAAGCGTTGCGCCTCGATTCGTCTTATTTGATTTTCCATATTACAAATTTACCACATCAGAAGTCCAATGGCGGGCCATTAAACGGACAATTTCCGGTCAAAAAGCGGACACGAATTATTTAGATGTGTTTGCTCTAAATTAAATGAGCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 28-264 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHP01000005.1 Paenibacillus terrae strain NRRL B-30644 contig00005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 28 32 100.0 36 ................................ TGTTTTCCTTGTCTGTAGTGTCCATTTGATCGCGTC 96 32 100.0 37 ................................ ATTTTATTGTCAAAGTACTGTTGAGCCAATGGGTGCA 165 32 93.8 36 ...........CA................... CAATTATCTGACCATTTCGCATCATTGTAGTATGTC 233 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 4 32 98.5 37 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : AATGGAGAGAAAAGTCCATCATTGATCG # Right flank : TCATTTACCGATGCCCCTGCGCTTCGCTCACAAGTCGCACTCTGTATGGAGTGCGTTTTTCACCCTCTTACTCTCCGCTTCCATCACTCGTCCTTTCCATTTCCATATGCATTAATATGCCAAAATTCACCTTTATACATTAGTCAAAAATATATTGACATATGGTTAATTTTGGAGAACAATAGAATGCAAGAATATAAAATTATGGAATTTTTATGTGGAGGGTGGTTTATGTATGGAAATCACACCTACGATTCGGGCGGAATTAGACAAATACCTAAAACAAGAGGGTTTGAGCCTAACGCAATTCGGGAATATTGCAGGCATTAACAGAGGAATAGTAAGTGGCATTGTAACTGGTAATAGTCCTATATCTGTTAACCAGCTTGATCTAATCACTGAGACTATGGGTTTACCGGAAGGCTTTTTTTACGAACGGTTCATAGATGACTACATCATCGAACGCTCTCCCAATATGCGTCGAATTGAGCGGTTGCTAT # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 14802-14086 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTHP01000068.1 Paenibacillus terrae strain NRRL B-30644 contig00068, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 14801 33 100.0 35 ................................. CTGTAATTCCTTTACTCGCTGCTGGAGCGCATCCC 14733 33 100.0 33 ................................. CCCCCTACTACCTATAAAGGAGAGATATACATG 14667 33 100.0 37 ................................. TTATAAAGGCTCAACAGATTAGCGGAACTTATGTCGA 14597 33 100.0 36 ................................. CGTTAGACCCTACAGATAGTGGAAAATTACGTTTTG 14528 33 100.0 36 ................................. ATACCATACTTTTGGTGTAAACATTGTCTACCTCCT 14459 33 100.0 34 ................................. AGTGTTGCCTTTTTTGGAACAGGAATATTGGTGA 14392 33 100.0 34 ................................. TTCCGATGTATGGCAGACATCTATGATGATTGTC 14325 33 93.9 36 ...................AT............ TGAGCATTACCCTGAGCAGCGTTCCAGGCTGCACGC 14256 33 100.0 35 ................................. GTTAAGGTCAGTCGAAGCCGTCTTTACGCCAGTCA 14188 33 100.0 37 ................................. TGTTTCCCGTCTTGATTTGGAGGGGAAAGACCTTTTA 14118 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 11 33 99.4 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CTCCATTTTTGTGGAAGTAGGTGTGATCTTGTTAATTCTAATTACGTATGATGTAAGCACAGTAGACAGGGAAGGCAGAAAAAGATTGGCCAAGGTTGCAAAAAAGTGTGTAGATCACGGACAAAGGGTACAAAATTCCGTGTTTGAGTGCATTTTGGATTCGACCCAGTTTCGCCGTTTGAAGTATGAATTAGAAGAATTGATAGACAAAAAAGAAGACAGCCTGCGTTTCTACAATTTAGGAGATAACTATAAAAAGAAGGTAGAGCATATGGGTGCAAAAGAAGCTTACGATATGGAAAGCCCGCTGATTCTGTAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCTCGAAATTTGTCGAAAAGGATTAGAATCCACTTTCTATAATAGAAGTCAAGGGTGGATTCAAACTTTTTTAGCATCGTTTTTTGCGAAAATGTATGGAATTGATATCATTAGAGTATCAATTGCTGTATTTTCGCT # Right flank : TACCACAACATCTTTCTTTGCTAATTCCTTTAAAGGTCGCACTCAGTAGGGAGTGTACCTTTCCACCACACACTCCTTCCATTTTAAACAAACTAGAAAACAACGAAAATCCTCTTATCTACTCAAAATATATTTTACAAATACCTTTATGATTCTTGAAAACATAAAGGTATTTGCTAATCAATGTAGAATATATATCGCTGTACTCCAATTCCAGAGAGGGGCAGATGAGGATGAAAAGGCGGGTTGCAGCAAATGGAATCAAGAGAGGCTTTTTAATAACGTTAGCATTATTACTAATGATTGCAGGGTCTTCATTGGGAATGAGTGACGCTTCCGCTGCACTATCTGAGCAGAAGGATAAGCAGGATGCGCCCGCTTTTTCCGAGGTATCCGTTCATGATCCCTCCATCGTCAAAGACGGCGATACTTATTATGTGTTTGGTTCACATATTTCGGCGGCGAAGAGCAAGGATCTTAAAAACTGGACTTCTTTTGCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //