Array 1 35978-35623 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKLT01000022.1 Halomicroarcula sp. F27 NODE_22_length_51724_cov_20.267884, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 35977 30 100.0 34 .............................. GACGCCGCGTAAATCGCCCCGAGCGCCAGCGCGA 35913 30 100.0 35 .............................. GAACACCGCTCGAACCCGCTGACGGCGTCTCCGGC 35848 30 100.0 36 .............................. GCCCGCGGTTCGGAACGACGCTTCGCCACCGTCGAT 35782 30 100.0 33 .............................. CGCATGAGCGTGCAGATGTAGTCGTCGTCGTTG 35719 30 100.0 37 .............................. TGCTGGAAGACGTAGCCGCTACCCTGCCCCGTCGCCG 35652 30 86.7 0 ...T............CA..A......... | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 97.8 35 GTTACAGACGGACCCTTGGGCGGTTGAAGC # Left flank : AAATTCGAACTCGCCGAGACGCCCTACCGGACGCTTCGTGACTGGTGCGAGCACACGCAGCAGAAACGTGGCTGGGATGACGGCCCCCACGTTGGCGGCTCACTAGTCGGTGATCTCCTGCGAGGTGTCGAGGCATGAGCTGTACCGTCGACGACCGAAAGCAAGTACGGCGGGCCGCACGAGCGATTCGCGATTCGGTGCCGACCATCGCTGTTGACGTTGTTGCACCAAACGCGAGTCGGCACGACGCGTGGACCCTCGACACCGTGTTGCGTGATCGGGAGAGTGTGCCGCCCGAAGTGCTTCGTGAATTAGTGTTGGCTGGGCTGACGCTGCAGCCGGTGCCGTCCCAAGCCGGGTATCAGCACGTTGTGGCGACGATATAGGTTTAGAAGAACCATTTTCGTCGACCCCGGGGGGTTCAGGGGGTATTGCCGGTCGACGAAAACAACTTTGTGCAGACAGGCTATAGCAGGCCTATGGCCCGTAGATGGGGCATG # Right flank : GTTGGTCTTAGGAACCATAGTCCACAGTTCGACGGGTTTTCACCTGCTTACCCTTGAGCCACGTTACTGACGACGATAGCAGCAGCAGTCAGGTCGTTCGGAGGTGATCCGTACGAGGCTCGTAGACCTCGCCCTGCTGCTTCAGCGTCTCGATCTCGTGCTCAGCCGTGTCCTGGCCAATGCCAACCAGGTGTGCCCGTTTGACAACCGCAGCAATCGGTGCGCCGTCGTCGAATTGCTCCGCCAACGCGTCGACGATCCCACGAATATCCTGGCTGCTATCTCGCTGTGTGGTCGCTGCTGTGGGGAATTCATTGCCAATCACGACTTCCTGTGGCCGTCTGAAATCGACCTCGAGTTCCCCACTAGCAATGGATTCGACCGCTTCGGTTACCTGCTCGTCGTAGACACTCACAACGAAGCCGCTCCCTGAGCCGTCATAGACGGCTTCAACATCGACGACATAGCTGTCGGGAAGCTGCTGCGCGACGTGCTCTTGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGGACCCTTGGGCGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 73160-77268 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKLT01000010.1 Halomicroarcula sp. F27 NODE_10_length_103346_cov_19.987357, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 73160 30 100.0 37 .............................. GTTGTGCCGGAGTTCCCACCAACGATTTGCCTTTCGC 73227 30 100.0 35 .............................. ACTATGCGCGGCCGCCGACCAGGAGGGCGGCGATG 73292 30 100.0 35 .............................. AACAATACCGCGCTTAGAGGAGCAAATCCAGGCGA 73357 30 100.0 35 .............................. GATTCCATCCACGCTTGGGCGTGGTAGGACTTGCC 73422 30 100.0 37 .............................. CGCCAGCGGTCGATACCGCTCGCGTCAGTACCGCTCA 73489 30 100.0 35 .............................. CGGGACTACGATAAGCTGAAGCAGGGACTGGAGGA 73554 30 100.0 37 .............................. AGCCGCCGAGACCGTGGAGGTTCCGCTCGTCGAGACG 73621 30 100.0 36 .............................. AAGAAGCTCACCGGCCGGGACACCATGCTGGCCGAC 73687 30 100.0 34 .............................. GAGCTTCGTGACGTTGACGAGGAGATACTCGATC 73751 30 100.0 35 .............................. AGCTCGTAGTCGGTACCTTCGGTAAGCGTCGTGCC 73816 30 100.0 35 .............................. GTGCTGCTGGGCATCGTCGGCGCGCAGTACCTCGC 73881 30 100.0 34 .............................. TATCGACATGCGATCTTCGCGGAGGTCGGACTGG 73945 30 100.0 35 .............................. ATCGACTGCAACCGAGGCCCGTGAGGCCTGCTGCA 74010 30 100.0 37 .............................. GGGTTCACGATGACCACTAAGCCCATCGCGGCGACGA 74077 30 100.0 36 .............................. CGGCGGTTCGAGAGCACGTGGTCGTCGGCGAGCCAC 74143 30 100.0 36 .............................. CGGCCAGAGAACGTCGACGTCGCGGTTCGGCAGGAT 74209 30 100.0 36 .............................. CCCGCCAGGTCGGCGAGTTCACGCTCGATACCGAAT 74275 30 100.0 36 .............................. CGTCTCGGCCCACTCGACTAGATCACCGAGGTCGCG 74341 30 100.0 36 .............................. ACGCGGGCGCGAGCCGCTGGCGAGCAACGCATCGTC 74407 30 100.0 37 .............................. GCCGGGACGTGGGCCAGCCCGACCGGCCGGCCCTCCA 74474 30 100.0 37 .............................. TAACAGCCATCTACAGAGACTATACAGAGATGATACA 74541 30 100.0 37 .............................. GCGAACCCGACGACCAAGACGACGGCGAACTCGCTTA 74608 30 100.0 36 .............................. GGGTAGTTGCTCGCGTCGCTGAACTCAGTCGAGACG 74674 30 100.0 35 .............................. ATTATTGTCGAAATAGCAGTTTTGGACTCGACAAT 74739 30 100.0 35 .............................. GTCTCCTCGTCGCGCTTCTTCCTCACCGTTCGGAA 74804 30 100.0 35 .............................. TGAGCACCGTCCTTCCGAGTGGCGTATCTAACCAG 74869 30 100.0 36 .............................. CAGTACGACGGGACGCTCAACTGGCGAGAGGACACC 74935 30 100.0 36 .............................. CGCACTACGCCGTCTAGAGAAGTGTCCGGGGGATAG 75001 30 100.0 36 .............................. AGCATGACCCGAATCGAGTACGAGGGTCCCGACCTC 75067 30 100.0 36 .............................. TTGACTGGGTCGCGCTCCTCCGGACCGCAGTGACAG 75133 30 100.0 36 .............................. GCTCCTCGGAACGGCTCTGTCTGATCAAATGGTGGA 75199 30 100.0 37 .............................. TTGTCCTCGGCGATCCGCCGGAGGACGTCGAGGAGCT 75266 30 100.0 37 .............................. GAGCGCGGGACGCCGGTCCGCGACGCACGCGAGACGT 75333 30 100.0 37 .............................. CTGAACTAACGGCGGGCAAACTCAGCGGGTTAGGGTT 75400 30 100.0 36 .............................. CGGTGGAACACCGGGGATTCGGAGTCCGTTCCGACG 75466 30 100.0 35 .............................. CGGTCTACAACTTCTATCCAGTATACGACTGGACG 75531 30 100.0 38 .............................. CCGGTCGTCGCCGAAGACGTTCCAGCGGTCTAAGGCGT 75599 30 100.0 36 .............................. TTGTTCCCGTGCGAGATAGTCCCCAGCGGCCGGTCA 75665 30 100.0 36 .............................. CCTCGCAGAACGTCTCCGTTGAAGTTCGGGAAGTGA 75731 30 100.0 36 .............................. TCTAACTGCCGCTGGCAAAAAGGGCGCACTGATAGA 75797 30 100.0 35 .............................. CGGTAGTAACTAACAGCCAGCAGTCTTATCACACA 75862 30 100.0 35 .............................. GGCCTCGCGGCCGGCTACCTCTACCGAAACCGGGC 75927 30 100.0 35 .............................. CGCCCCGACACGATCCGCGACCCGGAGACGCGCCG 75992 30 100.0 36 .............................. GCCTGCGCTCTGCTGGGGCTGTGACTGTCCACGCGG 76058 30 100.0 35 .............................. CGTCATATCTGCCACCGTTGCAGGGGAGTTACCTT 76123 30 100.0 36 .............................. GCGGTCGGGGCCGGCGGCGTGATGATAATGCACTAC 76189 30 100.0 35 .............................. GACCGAGCGGCACGTTCGAGGTTGTCGACGTTCGA 76254 30 100.0 37 .............................. TCAAAGAGCTCGTCGACACGGCGACCGGAAAGATCGA 76321 30 100.0 37 .............................. TCGAATGGCGCGCAGTAACCGCATCCCTTCTCCCCAC 76388 30 100.0 35 .............................. TCCGTCGCCCAATTGGTCGCCCCGATTAGGGAGTT 76453 30 100.0 35 .............................. GGCTATACCGCGGACTACGCCGAATATGTGAACTA 76518 30 100.0 34 .............................. ATCCAGTAGTGGCTGAAGTCGACGTTCTTCGAGG 76582 30 100.0 37 .............................. TCACAGGCCTCCTCGATGGCCTCCATGTCGTACTCTA 76649 30 100.0 35 .............................. ACGCCGGTCTGGGAGAGCTGGAAGCGGCCGTGCTT 76714 30 100.0 37 .............................. CAGACGCTCTCAGCGTTGACCCACAAAACGCTACACG 76781 30 100.0 35 .............................. TGATTCGGGTGCATGGGGTCCAGATTGGACATACA 76846 30 100.0 36 .............................. TTACAGAGGTCCCATATCTCCCGTCGGTTAGTGTCG 76912 30 100.0 35 .............................. CCGTCCGCCGTCCGCTTTCGGGGCGGTCCACACAG 76977 30 100.0 36 .............................. CGGGAAGCGCCGGACGAGAACACGACCTGGCACGTG 77043 30 100.0 35 .............................. TCGATCCTCTCCAGCGTCAAGCCAGCTCGAGATCA 77108 30 96.7 35 .............................T CAACCAACTTGAGGACTAACCGATGAACGCAACCC 77173 30 100.0 36 .............................. ACCCCGATAGAACAGGACTACACTATCCTGTCGATA 77239 30 83.3 0 ...........G.T....A.T.A....... | ========== ====== ====== ====== ============================== ====================================== ================== 63 30 99.7 36 GTTACAGACGGACCCTTGGGCGGTTGAAGC # Left flank : GATCTGGTTCGAGGTGTCGAAGCATGAGCTGTACCGTCGACGACCGCAAACAGATTCGGCGTGCTGCACGAGCGATTCGCGATGCAGTGCCGACGATCGCCGTTGACGTGGTCGCGCCGAACGCGAGTCGGCATGACGCGTGGACGCTCGATGCTGTGTTGCGTGACCGCGAGAGTGTGCCACCCGAAGTGCTGCGGGAGTTGGCGCTAGCTGGGCTGACGCTGCAGCCGGTGCCATCGCAGGCCGGGTATCAGCACGTCGTAGCGACGATGTAGGTCGACGGGACGCTACTCAACTCGTCTGCAGAATAGCTCGGTTTAGGTCTCACGTTGGCGCCCCTCTCTCGTAACTGCCACCCATAGGCCGATAGCTTGAGCCCACTATGGAGTAATTGGCCTGATTTCGTCGACCCCCCGGGGGTTCAGGGGGTATTGCCGGTCGACGAAAACAACTTTGTGCAGACAGCCTATAGCAGGCCTATGGCCCGTAAATGGGGCATG # Right flank : CACCTGTAGCTCGAGGAATTTGTCTTGGGTCGCGGATTTCCAGACGGCTCCTTGTGGAATCGAAGTTCCGCAAACTTCGCCGTCGAGACGCCACCAGACGCCAATTTCAGTAGACCTCTATTTGGACTATCTACTTTTACTCCGATTAACCGTCATTTATTTACCACTCGTTTGACAACCATCCTGTTATGCAGAAATCCAATAGACGAGAGGTGATTTGACCGGTGCGGATTCTCGTTCGGTTGAGCGCTCGTGCTGACGCTGCCTACGATAATACCTATCATCACAAGCTTCGCGGGCGCTTGTGGCAGGCTCTCGAAGGGAGCGACTACGATTCGCACCACGACGACAACCAACCCAAACCGTTCGCGTATAGTAATCCATTCCCACCGGGCGAAATGCAAGAAGGCGACGAGCGAAGCCTTCTCGTCGCCTCCACCGAAGAATCGCTGCTCGCCCACGTCGCTGAAGACCTCACTCACGACCGAGAACTGAACATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGGACCCTTGGGCGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 86842-88314 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKLT01000010.1 Halomicroarcula sp. F27 NODE_10_length_103346_cov_19.987357, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 86842 30 100.0 36 .............................. GCGCGGGTGTCCTGCTCGCGGAGCGCCAAGTCGAAG 86908 30 100.0 36 .............................. TACATCCACTCGTCCGGATTGGAGGGCTACCTGTGA 86974 30 100.0 35 .............................. GAGGATCTCGATGCGTGGCTCGACGAGCAACACGA 87039 30 100.0 37 .............................. CGCCGTTCGGCGGCGAGTCGGCGGATTTCCGGCGGCT 87106 30 100.0 36 .............................. GACCCGAACACAGTCATGGGCCGGCCGCCGACGCGG 87172 30 100.0 35 .............................. AGTCCGCGAGGACACGAAAGAGTCGTTAGCAAAGC 87237 30 100.0 36 .............................. ACGAGGTACTCCACGGTGTCCTTGGTCTTGTCGCCC 87303 30 100.0 34 .............................. CGGCACCCCTCTCTGGGGACCCCCGTCCTCCAGA 87367 30 100.0 34 .............................. TCCCGTGAACGTGACCGTGTTCGTCGAGAACTTC 87431 30 100.0 35 .............................. GCTTCACTCGGACCTGACGGCCGTCTTCAAGCTCC 87496 30 100.0 36 .............................. CGTATATCTCATCTGCCAGTATCCGAGCGTCGGGTT 87562 30 100.0 35 .............................. ATCGGTCTATCGACGAAGGCGAACCCGTCGAACTC 87627 30 100.0 36 .............................. ATGTTGTCGAGTCGGTCGCATCGTCGTCGTAGATTA 87693 30 100.0 36 .............................. TCGCGTTGCTCGCTTGCTTCTGGTGTTTTTAGACTC 87759 30 100.0 37 .............................. ATGGAGGTTCTCACTCATATCTATCGCCAGTGAAAGC 87826 30 100.0 35 .............................. CAGTTGTCGACGCTCTCAGTCTCGCCGAAGACGGT 87891 30 100.0 36 .............................. GAGACGTACGAAGTCGGTGACGAGTGGGTATGGGCG 87957 30 100.0 36 .............................. GCTGGTAGTCCCGACGGTCAGATTCGAGAGGCCGTC 88023 30 100.0 34 .............................. GGTCCGACAGTATAAGCGTTGCCCAAGCAGCGGC 88087 30 100.0 35 .............................. TCGTCCGATCCGCCGGAGTCGGACTTAGCGGACTG 88152 30 100.0 36 .............................. CGGTCGAAGGGCCGCCCTGCGTTGTGTATTCAACGA 88218 30 100.0 37 .............................. GACCGTTGTAGCCATGCAGGAGTGGTTTCTCGGCCGG 88285 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 99.9 36 GTTTCAGACGGACCCTCGGGAGGTTGAAGT # Left flank : ACAGACGGTTGAGCATCCCCGGCTGAACAAACACGTGAGCTATCAATATCTCCTCCGTGTCGAGGTGTACAAACTGAAAAAACACCTCCTCACCGGTGAGGAGTACGTTCCGTTCAAACGGTGGTGGTAACTTGTGGTCTACGCCATCATCGTTTACGACGTCCAGGCCGATCGGACGCCGAAATTTCTCAAGTATCTCCGCCGATATCTCACCCACGTGCAGAACTCCGTTTTCGAGGGCGAACTCACTGAGGGAACACTCGTCGAAGTCAAGGAGACACTGCAGTCGATGCTCCAGGACGGCGAATCCGTCATGGTGTACCGAATGGACTCCGAGAGCTATGTTGAGCGGTCGGTGTACGGTGACGATCCGATGGACGAGCAGCAATTTCTGTAGCTACCGTCGTCGACCCCCGGGGGTTTAGGGGGTATTGCCGGTCGACGAAAATAGTGAAGTGAATTCGGACGCAACAGCCATTATGGCCCGCAAATCGGCCATG # Right flank : CAGCCGAAACGCGCTGACAGCGACACAATCTAATCCCACGAAAAACAGCTCGATCACATATCGACGGTACCACCAACCTCCCATGTCACTCGCTCGCGAGAAATGCCACTTCGTCATGGGCGTAGCTGTAGATCGACAGCGCCGCCTCGTGACAGTGGGCCTCGAGATTGGCCGGTGCTACCTCGTCTCCACGCGGCCCTTCGTAGACGATACTCACGTCGTCACCAGCCACGTCGACTACCACAGCAGGATTCGGGTCGTCGTGAGACGATTTGATGACGTAATCCCCGACGACGAATGGATGCTCCGCAAACTGCAGATTCTCGTGCTTGTAGGTGTAGAGACTGATATTCTGATCATCACAGTACGAGGACAACAGCGCTGGTGAGATATCACGCCAATCGCCTGGCCCTTCGTCGAGGGAACTCGGGAACGCAACCCGAACGCCCTCGCCATCGAGTTCCTGTCCATACAGCTCGACTTTCGTCTCGGGTGGCAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTCGGGAGGTTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //