Array 1 119729-120910 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLXE01000016.1 Klebsiella pneumoniae strain PB65, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 119729 29 100.0 32 ............................. GGGGCTAGCTCCCGGACGAGAAATGTGACGCC 119790 29 100.0 32 ............................. CGATTACGGAGTCGTTCACAAACCGACCACCG 119851 29 100.0 32 ............................. TCGGTTTCGAGCGCGGTGTATTCCTGCCAGGC 119912 28 89.7 32 .....-......TG............... TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG 119972 29 100.0 32 ............................. GCACCCTCACGGATACCTTTTGCACAGTGTTA 120033 29 93.1 32 ............TG............... TTACCAATGGGGAAAAATCTTCATTTGTAACT 120094 29 96.6 32 T............................ ATAACTATCAGGGTAGATTCATGAAAAGGGTA 120155 29 93.1 32 ....C.......................C CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG 120216 29 93.1 32 ............TG............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 120277 29 100.0 32 ............................. CAGCGTCTGAACGGACGAAACATCCCTGTTGA 120338 28 89.7 32 .....-......TC............... ATGGGCTGGCGCGACTCAAATGCCCGTTTGGC 120398 28 93.1 32 .....-......T................ CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA 120458 29 100.0 32 ............................. GCAGCGGCCTGACGATGATTGATATGAACGGC 120519 29 93.1 32 ............TG............... TTACTTTTTGGCAGTTGGTAAAACACTTTTAC 120580 29 89.7 32 ............TGA.............. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 120641 29 96.6 32 .........................A... CACTACCAGATCCGAATGGACACCCGTAATGA 120702 29 96.6 32 .............C............... TGACTTTTAAAAAAAATCAGCTGAAACAGCCG 120763 28 89.7 32 .....-......TG............... TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 120823 28 96.6 32 .....-....................... CACTACCAGATCCGAATGGACACCCGTAATGA 120883 28 89.7 0 ..............C.......-.....A | ========== ====== ====== ====== ============================= ================================ ================== 20 29 95.0 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTGCCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAATTCCAAAAGCTGGTGGATTTTAGTAGTGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGAACCAATTTATACTGTTTATATATACAGTATTTTTAGGTGGTCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCAAGCCCTGCCCAGGATTATACTTCCGGTGAGCTAGACCTGAACGATTATTGCATCAGGCATC # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.43, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //