Array 1 13402-14363 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYY01000038.1 Geobacillus stearothermophilus strain B4114 NODE_53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 13402 30 100.0 39 .............................. TCCGAAAGCAACGCCAACGGGTGCAAGTCGCGCTCTAAT 13471 30 100.0 36 .............................. AAGTGTGCCCTAGATGCAACGCAGGGTTTAAAATAA 13537 30 100.0 37 .............................. TGTACGAGCGCGGAGCGAAGGCGATTGCGGAGCAGTT 13604 30 100.0 35 .............................. TATGAGCAGGTGTAACAATGCGTGCTTCCTGCCTC 13669 30 100.0 39 .............................. ATTGGCTAGGGAGAGTCAGCGATCACTTTGACTATGCGA 13738 30 100.0 35 .............................. AGCCCATCCCCTACCGGCGACAGTGTCGCGACAGG 13803 30 100.0 35 .............................. ATCAGCTTCGCGAACTCCCTTTCTCTTTGCTGCCC 13868 30 100.0 38 .............................. ACTACTACCTCCAAGACCGCTTCCGCAACAAGATGAAC 13936 30 100.0 35 .............................. GTCGGCTGGCAATTGTCAACAGCGCAAACCGGTCT 14001 30 100.0 36 .............................. ATTTCTTCGAGGTCCAAGTCCTCGCTCAAGGTCACA 14067 30 100.0 37 .............................. AGATTTGACCAATGGTGGCATTTAAAATAGGACCGAT 14134 30 100.0 36 .............................. GTCGTATGCTTGTGCGGAGACCGCTGCCAATTCCTT 14200 30 100.0 36 .............................. CGGAAATTTCGATCAAAATTTACTCCTAAATCACGG 14266 30 96.7 38 .........T.................... ATCAACACTTCTTGCTGTTTGTTTGGATAGATGCGAAA 14334 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 15 30 99.8 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTGATGATTGTGGAATTGAACTTGACAGAGATCGAAACGACAGTATCAATCTTTCGAGATATCCTGCATAGCGACTGGTACCGTGAGTTGCATGGGAAGTGAAGCCTTCGGAGCGTCAATCAAACGAGAGCAGTTTCGGCGAAATCGGACAAGGATCAAGCAGGGAATGAAGCATGGGATTGAACAAGGACGCCAAAAAGGATCGAGGAAGGGAAACCCGACATCGCGAAGGAAATGTTGATGAAAGGGTAGGATATCGACACGATCCACGAACTGACCGGGCTGCCGGCGGAAAAGATCGAACAGCCGAAGAAGTCAACCCGCCTTTGCATTGTCGTCGACCTCCAATCATGCAAAAAACCCGGGGGATCGACGACAATGGTTTTTGACGCTCCAAGCCTACAGCCATCACGATTGAAAGTCATTGACAGAATTTTTGAAACGTGCTATGCTGAAAATAGCTCCAAACCGAAAAGCTTGATGGAACAAGCCTTTTTGGG # Right flank : CATCATAAAAATAGTAACTATTCACCCCAGTGCTAGTGTATAAAAAAGCCCAGCACAAATAGGGCATTTCGGTCATAGAAAATGCCCTAGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 18320-16880 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYY01000122.1 Geobacillus stearothermophilus strain B4114 NODE_212, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 18319 29 100.0 35 ............................. GAAGGACCTCGCGTAGTCGATCAATGGGTTGACAC 18255 29 100.0 37 ............................. TTCTTATATTAATGGTTACAGTTTCAGCTCAGCATAT 18189 29 100.0 36 ............................. TATGAAGTGACAGAGTTGGTGATCGACCGTTACAAC 18124 29 100.0 39 ............................. AAAAAGCTGGCATGATCAGAACGTTCAAACCGTCGAGGA 18056 29 100.0 36 ............................. TGTTCTTGTCACGATCGATTTTGAGAACCGGAAAGC 17991 29 100.0 37 ............................. ATTATCTATCGGTCTTGAAAGTGAAATCGGCACTTTT 17925 29 100.0 37 ............................. CTGTCCCGCTGGATTCACGAACCTCATAGCCGTACAT 17859 29 100.0 35 ............................. CGGTCATGTCACCGAGTGAAGCGGCGGAAAGATGG 17795 29 100.0 35 ............................. TGAAAAACATTGTAGTAAAAGACGGCATGACTTAC 17731 29 100.0 38 ............................. GCAATTGTCGTACATTAACTTGCGGACTTTGGCGGCGT 17664 29 100.0 35 ............................. CCGTCATCTAATTTTCGTAAAGCATCGTTGTGTCT 17600 29 100.0 34 ............................. ACGACGAACTCGAAGCGCTAAAACTCACGTCCGT 17537 29 100.0 35 ............................. GCGCGTGTTCGAGGAACACACCGGAACCGACGGAC 17473 29 100.0 34 ............................. GCGAACACAGAATCACTCATCATTAGTGCGAGTG 17410 29 100.0 34 ............................. GAAGGAACTGTGAAAGACAAGGAAATGAAGGCGG 17347 29 100.0 36 ............................. GCGCTTTTTCGTGCTTCGTGTGGGCGAAACTTCCCC 17282 29 100.0 35 ............................. GTGTATTCAAGGACAGCCTTGCCTGTTAGCCCTGT 17218 29 100.0 35 ............................. ATCGTATAGCTGTTTCATGCCGCTTTTTCTTCGCT 17154 29 100.0 36 ............................. TGAGCAGCCGGTCGCCAGTATTGACAGGCACGTTTA 17089 29 100.0 36 ............................. TAGTGTATCGGTTGATTGTTTCACATTTTATTCCCC 17024 29 100.0 37 ............................. TTCGTTGTCAAGAAAGCAGCCGGCCGGCCGATTTTGT 16958 29 100.0 21 ............................. AACCATTTCATCGCCGAAGTC Deletion [16909] 16908 29 89.7 0 .......T................C...A | ========== ====== ====== ====== ============================= ======================================= ================== 23 29 99.6 35 GTTTTATCTGAACGGAGTGGGATTTAAAG # Left flank : GATGAACGATATAAACCGCTGAAAGCGTGGTGGTGAACCATGTTTGTTATCATTACGTATGACGTAGCGGAGAAGCGGGTCAACAAAGTTTGCAAAAAATTAAAGGAATATCTCACTTGGACGCAAAATAGCGTATTTGAAGGGGAGATTTCGAAAAGTCTGCTGATGAAGTGCATGTATGAATTGGAGATGATCATTGATAAAGAAGAAGACTCCATTTATTTATACGAAGTAGGAAATCCGAAGAATATAAAAAAGCGGGTATTTGGTCAGGAAAAGAATTTTGATGAGTTGTTCCTCTAAGTTTTAAGAATTTGCAGTGAACCTCCTTTTAGCGGATAAATGGGGAAAAGCTTGATTTATCAAGGGAAGTGTGTCATTATTTGTGTAGCATAGAAAACACAATTACTACTTTACTGCAAAATGAGGTATAATTGTTGTGTAGGCATTAGCCGGAATTCCCTGCTACATCAATGAATATTGCTTTGTAACTGATAGGG # Right flank : TCGGCGATAATGTGATGCCCGAGTTCGACAGTGACTAGGCAAACAAAATGCCTTTCGCCCCTTGATGCAAAAGTGACGAGAGACATTTGGGCACACTTTGGGCGTGTAGCTTAGGCGCGAGGATGGATGCCTAGGATCTTCGGAGGAGGCTCCAGCCCTAGAGCCGCAAAGAGTTGCGCTTGTTTGGCCGTCAGTTCAGTCCGTTGATGCAGGTCGCCGTTTTTGGAAGAAAAATGTCCAAGCATGAGACGCTCACATTCGTCTCTTACTTTTGGCCATGATTCATGAGTCAGGAGAAAGGAATGGCGAAATGCTTTGGGCCAGACGTTCCAGGACGGCGCGATCCACTTCATCTGCGCGCCCAAACGAATCAATCACCTTCGCTTTCGCATATTTGGCCTTCGGATCCTATCCGTTGTGAGCAAGCTGGAGATACGCCACGGTCGTTCCGTCTTTGTTTTTGTGTGTTACTCGTCGTATGTACATGCCTATATTATAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGGAGTGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 3291-178 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYY01000018.1 Geobacillus stearothermophilus strain B4114 NODE_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3290 30 100.0 36 .............................. TAACTTACAAGCAGCAACCGGATTGGAAGGACAAGA 3224 30 100.0 37 .............................. CTTTGAACCTGAACAACGCTCGTTCGGGTTCGGGTAC 3157 30 100.0 38 .............................. ATACAGGAGCAACAGTAAATGGCACTTTAAGGGCTACA 3089 30 100.0 36 .............................. ATTCATTTTTGGTAACAAAAACGCTATAGGACTAAA 3023 30 100.0 36 .............................. TTCTCTCAATGCGCGGGCGCTCTGGGGCGCTTTCTT 2957 30 100.0 37 .............................. CCATACCAAACAAAATTCCACACAGCATACCCGATTT 2890 30 100.0 38 .............................. AAAATAAACAAGGAGGAGATCAAAAATGAAACAAATCA 2822 30 100.0 38 .............................. TACAAAATATAACAAGGATTTAAAAATTGTAGATGAAT 2754 30 100.0 40 .............................. TTATGACAGCTAGCACACAGGGATTGTAGATTGTTCATGT 2684 30 100.0 39 .............................. AAGGAAGCCGGTGAAGAGGAATGGGGGGTGACCAACTTT 2615 30 100.0 38 .............................. CCTACAGTCGGCGCAGGAGGACAGGACAACTTGGCTGG 2547 30 100.0 36 .............................. ATACAACTCGGTTCATAACATCCCTTCTCCCTTCTA 2481 30 100.0 35 .............................. TAACAGGAAAAGGATTCAAAAGTGACATAAAAGTG 2416 30 100.0 39 .............................. TTTCGTCCGGGCCATCCACTTGTAACAATGAGGAATCGC 2347 30 100.0 37 .............................. AATGTCCACGTGTATGACCCGATTTCTTGTGGGGCCA 2280 30 100.0 38 .............................. CAAGGCTTTTTAGGTAGACTGGAAGGAGGTGAAAAAAA 2212 30 100.0 36 .............................. CGATAAATATAAGGAGTGTGTCTCGAAAGGTCATGA 2146 30 100.0 38 .............................. AAAGTTGGGCTGGATCGTGCGACAGCTGATAAAATCAA 2078 30 100.0 36 .............................. ATAAAGATGTACAGAAAATCTGTAGTTAGAGATGTG 2012 30 100.0 39 .............................. TTCCTCCCCTGAAGCTTCCAGGATAGCTTCAATTGTTTT 1943 30 100.0 36 .............................. ATAGATTTGACGAACAAGAAATTCGGTAGGTTGTCA 1877 30 100.0 37 .............................. AGCGAAACTCCTTTATTTTTTCGCCTACATATTTCTG 1810 30 100.0 38 .............................. CCTGGAAACTGACATGATTGCATACGGAAAGCAAAAAG 1742 30 100.0 37 .............................. TCAGAACGCAAAAAAAGCCGGGATCAAAGTGGGGTTT 1675 30 100.0 36 .............................. CCTTCATGAAAACATACCGATGAAGGAGGTGAGAAC 1609 30 100.0 39 .............................. AACGCTCGTCTTGGATGGAATAGTTCGTTTCCGTCATCG 1540 30 100.0 34 .............................. TGGGTGCGCAAGGTGTTATCCGTCTGTACCGCGA 1476 30 100.0 37 .............................. TGACCAACAGCCTCACGCTCCCACTGTTTCATTTGTT 1409 30 100.0 35 .............................. TTCCAAGAGAGAAATGAAAACTTACTTTCGTTTCA 1344 30 100.0 39 .............................. AACAAGCGATTGACTATGTAATACGAAAAATTCCAGGAT 1275 30 100.0 36 .............................. ACTACCTGGAAAAGGTGCTTTCTCTCGATGTTGATG 1209 30 100.0 39 .............................. ATATAAGTATGGTCATGATAGACTCTTGCATACTCGCTG 1140 30 100.0 35 .............................. CAATTTGATTTTTATAACCGTACAAACTTATATAT 1075 30 100.0 35 .............................. TGCGAAGGTCTAGCGCTTCTTGTTTCGTTAGCTTG 1010 30 100.0 39 .............................. ACGGCAAAGGCTACAATGACCGGCGCGACGGTTTTGTCG 941 30 100.0 38 .............................. ACGTCATTTGAACTTGCACTGGGAAGACTACTTTCTTT 873 30 100.0 36 .............................. GAATACGAACTCTTCTTCACCTTTCGTGACGTTTAC 807 30 100.0 37 .............................. TGGGTTCGCGCAAGGTAGTCGTTTTCGAGCCCACACC 740 30 100.0 34 .............................. CAAGTATGAACCAAAGAAATACAAAGCAGCAATC 676 30 100.0 35 .............................. TGTCGGTTTAGAATTTCGTTGATTTTAGCGTTTTG 611 30 100.0 34 .............................. TCCTCGCCTCTCGTAACATATTGGAGACAGTCGC 547 30 100.0 38 .............................. TCCATAATTATTCCTCCTTTCGTTTTATCGGAAACTAG 479 30 100.0 39 .............................. CTGGAAGCGCAACGCGACACCCATGTCGCGACACCCTCC 410 30 100.0 36 .............................. TTTCGGCTGGGGTCGCTCCTGCGATAGCCCCGACGC 344 30 100.0 37 .............................. ATCGCCTAGCTGATGAATTAGTTTCGGCGGTCAAAGA 277 30 100.0 40 .............................. CAACCAACTCACGGCGATCAACGAAGAATACACACAAAAA 207 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 47 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAAACGTTCGACGGAAGAAAGAAAACGCAATTTTTTGACCCCGATGATGAGGTGTTCCCCCACCTGATTGAATTGAATTTCCGTCATAAATATGAAGCGTACTACGGCGTTCCGCCGACGGAAAGACTGTTGATCGAGCCGGTTCACGTTCATCATCGTCATCGTGTGGTGACAATGTTCAAGAATATGTATATTACAGGGTGGCTTGGCTATTACCGCCTCTGTTCTTCACCAGAACAGTTGACATTTTTATATCATGTCGGTCTAGGTGGCCGAAATTCACAAGGATTCGGCATGTTTCGCCTTAAAAGCGAATAAACGGGTCAAGAGATTGTCGTCGACCTCCAATCGTGCTAAAACCCCGGGGGATCGACGACAATGGTTTTTAGCGCCTCAAGCCTACAGCCATCAAGGTTGAAAGCCGTTGACAGAATTTTTGAAACGTGGTATGCTGAAAACAGCTCCAAACCGAAAAGCTTGATGGAACAAGCATTTTTGGG # Right flank : CCATGACGGAACTCCAGCGTTCATAGTGAACGAAAAAACGTTCTGTAGATGAGCATTTTTCATTACAATAATTTCCATGGTTAGAGAGACAAACAGGGTGCCCCTTACGCGATACGGAGCTGTTTTTTGATCACATCAATGGGAATCTCTTGCTTTGCAGCGTCATAAATGAACTCGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 14365-12002 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYY01000018.1 Geobacillus stearothermophilus strain B4114 NODE_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 14364 30 100.0 35 .............................. GAAAGAGAGTGTAGGTGGTGTCCCGGTGGGCGAGG 14299 30 100.0 41 .............................. CGGGCAACAATGCAAGTTGGCTTCATGACGCTTGCTGACGA 14228 30 100.0 35 .............................. ATAGAAATGCTCGGGTTCACACAGCACGAACTTGA 14163 30 100.0 38 .............................. CAACGCTAACTGTCGCAAAAAATACCGTCATCGATGGC 14095 30 100.0 35 .............................. TCACGATTGATTTCAACCGTCGCCGCGCTGAATAT 14030 30 100.0 36 .............................. CAAATCCAAAACGCCGTGATAAACAATGTCCGTCGC 13964 30 100.0 36 .............................. AGTCATAAGCACACGTGCCTTGAATGAGGTAATTTG 13898 30 100.0 38 .............................. ACCATTTTCGATTTCGTTGAGAACGAGCAACAAGAGGC 13830 30 100.0 35 .............................. ACGAAGTGAATAATAGAATCTTTTTGTGATTCGAT 13765 30 100.0 38 .............................. GTTCAAAAGCCCCCTCACCAAGAGGGCAAGGGGGCTGA 13697 30 100.0 38 .............................. ATCTGTGGGAACGTCTCGGTTTCCCAAACGAACTTTAT 13629 30 100.0 36 .............................. ACGTCGTACGCGATGGAGGCGTTGTGCTGTCCCTCC 13563 30 100.0 36 .............................. ACATGCGAAAGACTTGGAAACCTTCAAGACCGGACG 13497 30 100.0 36 .............................. TTCCAACATTATACTAGCAAGGGTGTTGCATGAAAA 13431 30 100.0 36 .............................. TCACGATCGATTTCGACCGTCGCCGTGCCGACTATA 13365 30 100.0 38 .............................. CCCAGGTAGAGATGCGCGGTTTGTATTCCGGGTCTTTA 13297 30 100.0 40 .............................. CCCGGAAGCGTACCTGTACGGCTCATTTCTGCCGCATTGA 13227 30 100.0 37 .............................. TGGACAGTAACTTTTCGCCGGGCGTTTTCGCAATAGA 13160 30 100.0 34 .............................. CGAGATGACGCAACCATTCCAACCAGAGCGACAG 13096 30 100.0 36 .............................. ACAAGCGGATCGACTGCGGCTTCGTTGCCAATTTTA 13030 30 100.0 36 .............................. CTGAAAACAGGGTGTATAGAGGTTTGGCACGAATCA 12964 30 100.0 35 .............................. CCCAAAACTTGCTGAATCATCGAGAGTACAAAGCG 12899 30 100.0 36 .............................. CTCAACAAGCGAACCAAATTTCACTGACGGTCCGCA 12833 30 100.0 36 .............................. TCATCGTCGTAATCTTTTGCGTAGCGAGGCGCTCCG 12767 30 100.0 35 .............................. CGGCTTCAAAAGCTAAACGAGCCAGACCCATCGTA 12702 30 100.0 36 .............................. TTTCATCATCACATGCGGTTGAAATTCGATTGATAC 12636 30 100.0 37 .............................. ACCGCTATGTCGAATTAATCGAAACCATCAGCCGCGA 12569 30 100.0 36 .............................. CAGTTAGCACAAGAAACGGATACATCAGGAATGGAG 12503 30 100.0 41 .............................. GAAGCCACCCGTGGCGATGACATTGTGGTTGTCACGGTCGA 12432 30 100.0 37 .............................. CTGCTGATTTTGCGGTATTAACCGCGCTGGAAATGGC 12365 30 100.0 39 .............................. AACTGGGGGAAATACAACCTCACTAAAGGCGGCAAGCCG 12296 30 100.0 37 .............................. ACAATCCGCAAACAGCGAACGCCGAGGGGTTCTACAA 12229 30 100.0 37 .............................. GATGTTAGGAACTAGCTTTTCGTTGCCCATGATTTCT 12162 30 100.0 36 .............................. AATGTTTTCTATTAAGGTTGATATAAAGTCTATCAC 12096 30 100.0 36 .............................. CCTGTGACAATCCATTCAAAGGCTTCCATTTTCTCA 12030 29 90.0 0 ....C............A.......-.... | ========== ====== ====== ====== ============================== ========================================= ================== 36 30 99.7 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTATTTGCGGCGATCTGAAGAGGAGGAAGCAAAACGGCGACACGAGGGGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGATGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGTTAAAGCAAGGGATGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACCGACCGGACTGCCGATGGAGAAGATTGAAAGGATGAAGGGGTGAGATGGTCCTTCGCCGTCAAGCCCCACATTGTCGTCGACCTCCAATCGTGCTAAAACCCCGGGGGATCGACGACAATGGTTTTTAGCGCCTCAAGCCTACAGCCATCAAGGTTGAAAGCCGTTGACAGAATTTTTGAAACGTGGTATGCTGAAAACAGCTCCAAACCGAAAAGCTTGATGGAACAAGCATTTTTGGG # Right flank : CTGCGCTAACGTCATAAAACGTTCGGCGCTTTTTTGTTTTCGCCGGACTTATGGGGAGTTGCATGTCTTGTAGTAGTATCGTAATTATGAATTTTATAAAAAACAATCTCGTTTTTTATACCATTTTTTTGTCTATATGGTATAATTAGATTAGTCCAAACGATGCGGAGGGGTGATAGATTGATCGAAGCAATCGCCCGAATCGGAAAGATGGTGCTCGAGAAGCAAGGAGAAGTGTCGGTCATTGATCAGCTGGTTGAGAATCCAGGTTATCCTTCTTGTGTGCTCATTTCATTGCGTGTGGATGGTGAGGGAAACGCTGTCTGGGAAGGATGCGAGGTTGAGGAATGCGGAAGTGATTATAAGAAATATTTGTTTCGTTCCGGATCAACGCGCGGAATCAATTATTCTCCGACAGCGAGAATTACGACGATCGAAAATACATATGATCAAAAAGTTCTCGGATGGTTTCGCAAAGTGAATCGGGTGATGGATGACCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //