Array 1 731373-729243 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUOT01000001.1 Thalassotalea euphylliae strain H3 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 731372 28 92.9 32 ....A......T................ TCAAAGAGATTTAGCGTTGATTAAGCAGATAG 731312 28 92.9 32 ....A......T................ ATTAATACGTAACAACGTACAGAGTTACGAGG 731252 28 92.9 32 ....A......T................ TTCGGGGCCTGCCACACTAAACGCTTCTGGGC 731192 28 92.9 32 ....A......T................ AGATACTGAGCTAAAAGGCATTACTGAAATCA 731132 28 92.9 32 ....A......T................ AAGCAGCTGCAGAAACCAATATAATTGGCACT 731072 28 92.9 33 ....A......T................ CCAGATAAATAAAGCCACCTACATCATCGATGT 731011 28 92.9 33 ....A......T................ TTGAAAGGTAAGTCAACACGCTGACTCCATCTT 730950 28 92.9 32 ....A......T................ TCATCGAAAGAGAGTCAAAGCATTTAGTAGCC 730890 28 92.9 32 ....A......T................ TGTCGATTGTTGAAGCATCCGGTAAGTTCGTC 730830 28 100.0 32 ............................ TTGAGAAGAGTTCAATTTGATGTGGTGCACCA 730770 28 100.0 32 ............................ GACCCGCAAAACAGCAGGCGGACTAGCTATGG 730710 28 100.0 32 ............................ TTTCTGGCTTGTTCGGCTTTAATGTAATCAGT 730650 28 100.0 32 ............................ CCGAGCCTAAGCCGGCAATAATATTAAACTTA 730590 28 100.0 32 ............................ ATTCCCGATTGGTATTTAGACCAGTTAATTGC 730530 28 100.0 32 ............................ GCGAAGGTATCGTAGAGGTCGGCTGGGACTGG 730470 28 100.0 32 ............................ TTTCAAAAGAGAAACATTGGTTTTTAATGCGG 730410 28 100.0 32 ............................ CGTAAGTTCAGCGCCTAAGCCATCCCCTTTAA 730350 28 100.0 32 ............................ ATTTAAAAGAGAGACATTGGTTTTCAATGCAG 730290 28 100.0 32 ............................ AGTCGGGTTAGTGTTAGAAGTGATAGCCACCA 730230 28 100.0 32 ............................ TTGAGCCCAGTTAGGTAACTGGCACATAATTT 730170 28 100.0 32 ............................ AAATTGAAGAAAACGTCCATATCTTCATTAAA 730110 28 100.0 32 ............................ AGCAGGTGCTACTTCTTTAACATTGACAATGG 730050 28 100.0 32 ............................ ATCATAGTAACGCCCACCGTATGAACCATTAA 729990 28 100.0 32 ............................ TTTTTCATTAGATAAAACCTTTCTAAAACAAT 729930 28 100.0 32 ............................ TAGTACGCGAAAGCCTGGCAAGATGGATAAAA 729870 28 100.0 32 ............................ CTAACGTTAGCCCATCAGGATTTGCCGCAATG 729810 28 100.0 32 ............................ ACTGGGCGATGATACGCTAGGGGATGGTACTG 729750 28 100.0 32 ............................ TGCTGCAATGTCAGGAAAGAACAGCGCGCACA 729690 28 100.0 32 ............................ TAGTGGTACTTTGGGTGAACCATATATTGCAC 729630 28 100.0 32 ............................ ATCTGCTGAGATATGAGTGAGCTGAACATCAA 729570 28 100.0 32 ............................ GCATAATGGTTTGCCATGGCTACCAATAACGC 729510 28 100.0 32 ............................ GTAGGGCGAACACCAGCCAAAACGTGATAACT 729450 28 100.0 32 ............................ AGCAGAGGGTTATAGTCACCTGATGCAGCGTT 729390 28 96.4 32 ...............C............ CCATAAAAGAAAACCAGCCTAAATCACCAATA 729330 28 92.9 32 ...A...........C............ GCTGTAATGACGCTAACGACCAACGTGTCACA 729270 28 67.9 0 ...........T.TTTATT..C..A... | ========== ====== ====== ====== ============================ ================================= ================== 36 28 97.0 32 GTTCGCTGCCGCACAGGCAGCTTAGAAA # Left flank : TCATTTTGATCGAGTGCATAATAGATGGTGTTCGTGTTATTTGGGGCGATGGTGCCAAAATTCAAGTGACTATTAGGTAGCGTAACACTTGCTTTTTCAATCACATATTGAGAGTTATTGGTAATGGTAACGCTTGGTTGTATGAAAAAATAAAGGTGATAAACGATAGCGGCGAAAGCCGCAAAACTCATTAATATAAGTGTGAGTTTCTTTGTGAACAAGGAAAAGCCAACGTGTTTAGGCATATGCTACTGCTAAGTTTTTTTAGTCATCCGCGTATAACTTTACAAGGATATAGCGATAAATCACAGATTCTTGATTTAGTCAAAAAAATAGCAGATAACTATTAACCAACAGATAAACGGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGTAACAAATTCAATATGTTAAAATTTAGCCAAAAATTTGGGTAAAAATCATTAGTTCTGCTGAGCTTATTGTTGCATCTATGTTTTTTCGCTTTAAACTATT # Right flank : TCAAAGCGCTATCACCTAATCTAGATAATAGCGCCTTGTCACGTTAAGTACTGGTGGGGTTACTTTCTGTGCAGGGTCGGTTAACTTAGCAAGCCAACGTCGATGGCGTCTTTCCGTAATTCGTTGCGAAAATCTGGATGCGCAATGGCGATTAACGCTTCTACACGCTCTGGTACGTTTAAACCGCGCAGGTCAGCTGCGCCGTGCTCTGTGGCGATAATCATTACATCATTGCGAAGCGTTGTCACTGCGGTACCAAGTGGTAGGGCAGTGCGAATAGTGGATTCAACGCCGTTTTTACCTTGGTGGGTTGAGGCGAGTACCAAGATGCTGATGCCGCCTTTTGACAGTGTCGCGCCGCGGATAAAGTCCACTTGGCCACCCGTGCCTGAAATTTGCGTAAAACCAACCCCTTCTGAGGCTACTTGACCGGTAAGATCAGTTAGAACACAGGTATTGATGGAGACAAAGTTGTCATTTTTGGCGATTTCTACTGGGTT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //