Array 1 17876-19025 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNMM010000022.1 Jiella sp. MQZ9-1 Scaffold21_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 17876 32 100.0 36 ................................ CTCGCTGGCGCCATGATCGGCGCATCCTCGGCCCGT 17944 32 100.0 35 ................................ TTCTTTCGCGGCGATCTCTGCCGCCGTCACCTGCC 18011 32 100.0 33 ................................ GAAAACGTCATCCACTGCCACGCATTGCCGATG 18076 32 100.0 33 ................................ GGGCAGCGCTGCAAATCTAGAGCGGAATGCGAT 18141 32 100.0 33 ................................ CAGATGGCACGCCGCGCCTGAGTCTGCTCGGGC 18206 32 100.0 33 ................................ GCTAACAATCCGTGCTCGACGATGCGGGAATGC 18271 32 100.0 34 ................................ GTATAGGTGAGCAGCTCGCCGTCCAGGTGCGGCG 18337 32 100.0 34 ................................ TGCTAAGGTGAGGACGAAGAACGGATGGAGGACG 18403 32 100.0 33 ................................ TCTGATTTTACGGGCAATGCGGCGCCGGATATC 18468 32 100.0 33 ................................ ACACGGCCATCTTCGGCCTCCGCGAACCTGTAT 18533 32 100.0 34 ................................ AAGCAACATCTTACAATAGATCCCCACGCCCTCG 18599 32 100.0 35 ................................ CGCACCATGTTGGCGCAAAGCCGACCGGACCTGAC 18666 32 100.0 33 ................................ CATCCAGGACGACGAAAACTCGCTTTCGTCTTC 18731 32 100.0 34 ................................ CAAGACGATCGGGCGATGTCGAGGTAGATGCAGA 18797 32 100.0 33 ................................ TTGCCGCCATCGACCGATAACGGTGGTGCAGGA 18862 32 100.0 34 ................................ TCGGACAACCAGGCGATCACGACGACGGCTGTCT 18928 32 96.9 34 .........G...................... CATTATGCGGCTGCGTCGACCTATCGGACCACCG 18994 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 99.8 34 GTCGCTCCCTTCGCGGGAGCGTGGATCGAAAC # Left flank : GCCTTGACAACTACCCGCCGGCCCGCGCCATTTCCGATTACGTCGTGACGATCGACCGCGAGGAATGGCCGGAGGGCGTTGAGATCATCGAGGCGGTCTGATCACGCGATGGCCGACGAGGCGGGGCGGCGAGGGCGCCGCTTCTGCGCGAGGGCAGGACGGTTTGCTGATCGCCGCCATCGCATGCACATGATGTCGGCGCCGGCGGACCGGCTGGCGCCGTTCGCGGCTGCAATGCCAGTGGCGGCAGTGCCCGAGCTGTGGCACAAGACGACGCATCGCACCGTTGCCGTGCCGGGGCGCTCCTCAGCGCCCGCACCGGCGGGCGAACCCCAAGCGTGCCGCAAAATCCCGGCCGGTTCGCGCTCAGCGCAAATCCTTGATCGCACTCCAACTTTCAAAAGTCCTTCCTGCCGATGGCAGCCGTGCCGTTGAAATCCCAGCCGGTTCGCGCAATCGGCGGCATTTCGTTCGTCCCGACAATAGGTTACACAGAGGCA # Right flank : CTGCACGGATTGGCCTGCTGCCGGTTTTTCGGACACGCAGTTAAGCTAACATAGCTTTCTCCTCGAACTCGACGGGGCTCATATAGCCCAATGTCGAGTGCCGTCGCTGGGGATTGTAGAAGCGCTCGATGTAATCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGAGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.00,-5.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 130-491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNMM010000007.1 Jiella sp. MQZ9-1 Scaffold7_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 130 32 100.0 34 ................................ TTTTGTGCCTGCGATTGTGTTATCAAAGCTTTTT 196 32 100.0 34 ................................ TCAAGAAAGAAGGGTCTCGCACTATCGCAAATGC 262 32 100.0 33 ................................ CTCGCAAGCTGGATCGCGTAAAAATCAGGAGGC 327 32 100.0 35 ................................ AATCGATCCTTGATTTGCACATCCGCGCGCTGAAC 394 32 100.0 34 ................................ AGCCTAACCGTTTCCAAGCTTTCTCCCGTCCTTC 460 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 6 32 100.0 34 GTCGCCTCCCATGCGGAGGCGTGGATCGAAAC # Left flank : GCCCCGATCCTTCACCAGCCTCACTGTCTCAAGCTTGAACTCGCGGCTGAACTTCCTTCTCTGCATTCCAACTCTCCAGTTCCGTTAAACACCTTATCTCGGTGTCCACGAAACCGGCAGCAGGCCAGTG # Right flank : CAGGCCCGAAAATGTCTGGGTCTTCGTGGGGCCGAGGACCGAACAACCCAATCCTCCGCGATGACGACGACAGCGTTGCTCACGGCTGCGAAGCCAGATCAAGGGTGTCAGTCAGACTTTGAAAATCGGGTCCATCGGCACAAGGGGGGCAGATCGATTCGGATCGATGCCCGATAATCTCCATCTTCATCAAAATTGCCTTTTACGCCACGAAGGTTGTCACGCCTTGCGCTCCCCGCCTTCGCATTTCGTCCTGAACGCCAAAGCGCGTGCAGCCATACGAGCCATGGCGCAAAATGGTAAACTCTTGCTAAGACGGCGACATGACCAAGCCCTTGCCCATCGCCATCGGCCACAGCGCCTGTCCCCACGACTGCCCGTCGACCTGCGCGCTCGACGTGGAGCTGCTGGACGGAGGGCGGGTCGGTCGCCTGCGCGGGGCCGCCGGCAACGACTATACGGCCGGGGTGATCTGCGCCAAGGTCGCCCGTTATGCCGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCCATGCGGAGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //