Array 1 248812-251461 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJGW01000004.1 Klebsiella pneumoniae strain EuSCAPE_RO039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 248812 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 248873 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 248934 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 248995 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 249057 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 249118 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 249179 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 249240 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 249301 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 249362 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 249423 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 249484 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 249545 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 249606 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 249667 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 249728 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 249789 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 249850 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 249911 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 249972 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 250033 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 250094 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 250155 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 250216 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 250277 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 250338 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 250399 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250460 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250521 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 250582 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 250643 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 250704 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 250765 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 250826 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 250887 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 250948 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251009 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251070 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251131 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251192 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251253 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251314 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251375 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 251433 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGATAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //