Array 1 136408-135830 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000002.1 Gilliamella sp. W8136 NODE_2_length_232995_cov_323.908055, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 136407 29 96.6 32 ............C................ ACGTCATATTCGTATTGTGCTCTATCCGCAAT 136346 29 96.6 32 ............C................ CGGCACGAAATAGAATAAATATAGTTTTTGAT 136285 29 100.0 32 ............................. GCTGTTGGCGGCCGTTGGTCAGGGAACATGGT 136224 29 100.0 32 ............................. TTCTTTACTATTGATGAATATAGTAATTATAT 136163 29 100.0 32 ............................. TTAAAGAGTTCGCGAAATCTGTTTTTAACACA 136102 29 100.0 32 ............................. TTGTTGCTATGAAAATGTATGTACCTAAAGCG 136041 29 100.0 32 ............................. TGTAATCTTCATAATAGCCTGAGTGCTCGTAT 135980 29 100.0 32 ............................. GCCACCTCTATTCGGGAGAACGACGACGGAAC 135919 29 100.0 32 ............................. CGCAAAGCATGCTTGAGCAAATGGCTGAGATA 135858 29 89.7 0 ..........................ATA | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.3 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : TGCGCTAACATCAACTTTATAGCATTAATTATGCCAATAATAAAAATACTCGTTAAATCAAAACAATTTGCTCAAAAAACAAACCAAAAAAGTTGGTAAAAATTTTAATGTACTTACTTTTAATTATAAAACAAAAAGTTATAATTAGAGTATTCCCTGTATATACAGGGATAAACCGCACCACGTAATATGTTCACCGTTTTGACAAACATGTTCCCTGTATGCACAGGGATAAATCGGCGGGCGTTAATATTACATAGCATTTTTTGCTATTCAAAAATCGCAATTCTATATTTTATTGTTAACCATTTTTTAACTGCATGAAAAATATAAATTTATCGGTAGAATCCCGTAGAACCTAATTTTAATTTCCATTAGTTTTAATTAATCAAATAAAAACATAGTGTTATATATTCGGATTTTAATGAAAAATATCCCAAAAAATCGGTAGAAATTTGACAGACAATATTTTAATTATAAAACAATATGTTATAATTGGT # Right flank : AAAATATTACAAACCGCCCTAGTGGCGGTTTTTTATTGCCAAAATCCTTTAAATAACATACCATTGCAAAAAAATATAAAGATCAAGGAGATGGTGTGAAAAAATTATTATTATTAACATGTTTAGGTTTTATTTTCTCTGGTTGTAGTGTTCATCATCAATTTAGTGACAGGTTGTCTTATCAATCATTAAAACAAATAAAATCAGAGATACATTTAACTCAAAAACAAAGCTTAGATATTACATGGATTCCTGGTGATTTTACGTCACGAATTGATATACAAGGGGCATCAGGGTTTGTTGGTGCTGGAACTCGTACTAGAATTCCGATCGGCATTGGTCTTTCATCAAGAATTGAAGAAGCAATTAGCACGTATGCAGATTTAAATTCTGACGGTAGAAAGTTAACAATAATAGTCAATGATGCTAAAACAAAATTCACTTATGGAGCAACGAATATTGATAGTGCTAGCGTATATTTAATTGTAACATTTGAATTA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : ATGTTCCCTGTACACACAGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 86153-85451 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000006.1 Gilliamella sp. W8136 NODE_6_length_176432_cov_329.323754, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 86152 29 100.0 32 ............................. CAGATGGGATTAGACGAGTCTGAACGAGACGA 86091 29 100.0 33 ............................. TTAGAAAAATGGCTACTGACGGCAAATTATCAA 86029 29 100.0 32 ............................. TCGTACGACACGATATTATCGATATCTGAAAA 85968 29 100.0 32 ............................. CATAACCAATCGCTAATTTTGATTTCCTGTGC 85907 29 100.0 32 ............................. TCATGGATTTTGTGGACCATGAGAATAAATAT 85846 29 100.0 32 ............................. CTCAGCGAGCTGTAGGTTTAAAAGCCAATCTT 85785 29 100.0 32 ............................. TTACGAAAAATACGAACGAGGGATTGAAGAGG 85724 29 100.0 32 ............................. ACATAATTTTTTTTCCTGTTCTCGACGTTTAA 85663 29 100.0 32 ............................. GAAACATTTAATTGGGTCGTCGCACCCAACAT 85602 29 100.0 33 ............................. CTATAATAATGGTAGCACAGCTAATGCGTACGT 85540 29 96.6 32 ..............T.............. TATTAGTGAGAACTAAAGATGGACGTAACATG 85479 29 75.9 0 AC...T.......A..........T.TA. | ========== ====== ====== ====== ============================= ================================= ================== 12 29 97.7 32 GTGTTCCCTGTATGCACAGGGATAAACCG # Left flank : GCTTATTGAAGAAGTTTTGTCCGCTGGTGGTATAGAACCGCCTCTACAACCTGATTATGTCCTGCCACCCGCTATCCCAGAACCTCAATCTTTAGCCGATAGTGGCTTTAGGAGCCGCTAATATGAGTATGTGTGTTGTGGTAACTGAAAATGTTCCACCTCGATTACGTGGTCGTTTAGCAATTTGGTTACTTGAAATTAGAGCCGGAGTTTATATCGGTGACATATCAAAACCAATAAGAGAAATGATATGGCAACAAATTGTTAAACTTGCAGAAGAAGGCAATGTAGTCCTTGCTTGGGCGACTAATACAGAATCAGGATTTGACTTCCAAACTTATGGCGCTAATAGAAGGGTTCCGGTAGATTTAGATGGACTAAGATTAGTCTCTTTTTTACCTATTGAAAATCAATAGGTTAACGTTCTTTAAAAAATTAAAAAAATTGGTAGATTTTTGGGGTACCAATAAATCTAAATAAAACAATTATATATATTTAGA # Right flank : TTAGATTAATTAGGTAAAGTAATAATAACGTTTTAACTTTATTTCTTTACCAATATCGGCATATATTCACTTTTATATTTTTATGAATATAAAAATCGAATGAGATTTATTAAAAATCTTAAATAGTTATGAAGTTCATTTTAAAACATGAATATTGAAAGTAACTGTTAACTAAACTAATAATCAAAAATAGCGTACAATAGAGCGTTATTAAACATATGATCATCATAAATAGTTTAGGAATTTAGCATGACAGGCAAATTTATTGTCATTGAAGGTCTTGAAGGTGCGGGTAAAACGACAGCAGTTAATACCGTTGCTCGTATTTTGAATCAATATTACATTTGCGATTTACAATTTACTCGTGAACCAGGTGGTACACCCATTGCTGAAGCATTACGCAATCTTATTAAAAATGGTTTGGATGATGAACCTTTGACGGATAAAGCTGAATTGTTGATGTTATATGCCGCTCGTATTCAATTGATTGATAATGTGAT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 105207-105660 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000003.1 Gilliamella sp. W8136 NODE_3_length_215774_cov_278.580183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 105207 26 100.0 36 .......................... CCGCAAAAAATGGATAATTCATTTGGTGGAAAAATT 105269 26 100.0 35 .......................... CCGTGCAGTCAGTTAATCCGCGAGTAAAATTTTTG 105330 26 100.0 35 .......................... CCGCACTACCTACAAATTTTGATACCAATGATAAA 105391 26 100.0 35 .......................... CCGGTTCAGATTTGAGCGGTGCACTCTTGGTATTT 105452 26 100.0 35 .......................... CCGGAGATCGCCAACATGAAAATCGCGATCGTTAA 105513 26 100.0 35 .......................... CCGGGCTATTTATCAACTGGCGCAATATTGTGATC 105574 26 100.0 35 .......................... CCGGTCCGATTCATACGCGAATCGTTAATAAATCT 105635 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ==================================== ================== 8 26 100.0 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : TGATTTTAATAAAAAATAACCTAAAAAATCGGTAGAAATTTGACGGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGGGAGTTCCCTGTATGCACAGGGATAAACCGTTCCATTAGTACTCTAGCACCCCTCTAATTGAGAGTTCCCTGTATGCACAGGGATAAACCGGACTGTGATTTCGTGGTGTTTTACGTCATCTAGTGTTCCCTGTACACACAGGGATAAATCGGCGGAGCGTCAATATTACATAGCATTTTTTGCTATTCAAAAAAATCACAATTCTACATTTTATTGTTTTCTATTTTTTTAATTGTATGAAAAATATAAACTTATCGGTAGAATCCCGTAGAATCTAATTTTAACTTACATTAATTTTAATTAATCAAATAAAAACATAGTGTTATAGATTGTGATTTTAATGAAAAATAACCTAAAAAATCGGTAGAAATTTAACAGTCAATATTTTAATTATAAAACAGTATGTTATAATTAGA # Right flank : AATATAAAACTACTACAAACCGCTTCCAACTTTATGGGGTCACTTCATTCTGGCGGATTTTTAAAAAATCAAGTTTTCAAGCTTAAACAAATTCAATTAATAGTAAAAAACAATTATCAAAATTTGTAAAAAAGATGCACTGTATAAAAATACACTGTTTGTATAAACATAAAGAAAATGCATTCTTATTTATATATAATCACGATTATTGATTATATATTGTGTGTTATTTATGGCTATGGATAGTGGTGGTGCTTATAGTATAAGAGGTTTTAATTACCAGAAAGCAGTAATTGCTCAAATTGCTATTAATAATTTTAACGTGGATAATTTTTATATCATTGTTGAAAATCAAGAGGACATTGTAGTTTTTTTCTCAGAAAAAATTTTTCACCTGCAAGTAAAAGGGCAAACATTAAGTATTAAAAGTTTAGTTAAAGTTCCAAAGAATAAACATTCGATTTTATATAAACTTTTAAATAAGGAAGAAAAAGTAGATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 109619-109953 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000003.1 Gilliamella sp. W8136 NODE_3_length_215774_cov_278.580183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 109619 29 100.0 32 ............................. GCTTGAAACATTTTTTAGGTTACCTAATAATT 109680 29 100.0 32 ............................. AGTTACCTCATCGTTATCACACTCAGACCATT 109741 29 100.0 33 ............................. CATCGATGCTTAATCCTCGTGATTTAAACAATC 109803 29 96.6 32 A............................ GGGATACCAACAGGACTGACGTGTCAATGTCC 109864 29 93.1 32 .C..........T................ TGACGCGAACAATTCAACTATCAAAATTACCG 109925 29 79.3 0 .C..........TG............ATA | ========== ====== ====== ====== ============================= ================================= ================== 6 29 94.8 32 GTGTTCCCTGTACACACAGGGATAAACCG # Left flank : AGGGGAGAAAGATGAGCGATTTAATGTTCTCTGTACACACAGGGATAAACCGATTTGTATGCACAGATACCAACCAATAATAACATGTTCCCTGTAAACACAGGGATAAACCGCCCAAACGGTTTGGGAAAATTTTCCAAAAGCAGAGTTCCCTGTATGCACAGGGGTAAACCGTGTCATAAAACTGGACTTCTGACTTGTATTTGGAGTTCCCTGTATTCACAGGGATAAATCGGCGGGGCGTCTATATTACATAGCATTTTTTGCTATTCAAAAAAATCACAATTCTACATTTTATTGTTTTCTATTTTTTTAATTGTATGAAAAATATAAATTTATCGGTAGAATCCCGTAGAATCTAATTTTAACTTACATTAATTTTAATTAATCAAATAAAAACATAGTGTTATAGAATGTGATTTTAATGAAAAATATCCAAAAAAATCGGTAGAAATTTGCCAGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGG # Right flank : ACAAAACTACTACAAACCGCTCGCGTGGCGGTTTTTCATTGCCAAACTTTATCAAATAACATACCATTGCAAAAAAACATAAAGAATAAGGAAATGGTATGGAAAAGATTATTTATTGTTTGTTGTTATTCCCATTTTTTGTATTTGCTGATGATTTCTATAATTGTAAATATGCAATGGGTATTGAAACAGAAGAAAATCTAAACTATTTGGCGAATGGAACTGTTCGGGTAACCAATGATAGATTTGTTGCTCAAGATTTAACACACAAGGAGCATAAATCGCCTAAATTTACAGAGTTTACAGAATTTGCAGATAATTTATCTATTGCAGAGGACTCAGAGAAAGTATATGTTCTTGCAAATGATAGAACAAAGTATGTGATTACGACTAAAATAAGTAATCTTGTTTTTAAATGGGGTAATTGTACTCTTGATTTATCTATTGACTTCGAGAATGAAAAATTTGGTAACAAACCAGTAAATTTTTTTCCTAAGATA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTACACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 111735-112069 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000003.1 Gilliamella sp. W8136 NODE_3_length_215774_cov_278.580183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 111735 29 100.0 33 ............................. TGTGTAGGAAAATCATTTTTAAAGTGGGTCGGC 111797 29 100.0 32 ............................. GTTAGGCTCGCCCTGCGTTCGACTATGCGCAA 111858 29 100.0 32 ............................. CTTTTTCTGAAATTGGCGCGTATCTGCGGGGG 111919 29 96.6 32 ............T................ ACAGCGCAGGAATAACACGCGGTCTAGCAAGC 111980 29 93.1 32 ............T...............T GATAACGGATTGACAATTTCGGCTGGGTGGGT 112041 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================= ================== 6 29 97.7 32 GTGTTCCCTGTACACACAGGGATAAACCG # Left flank : TTCAAAAACTAAAGATTTTGAGTTCTCTCTAGCTGGCTTTGCAAAAGCCTTTAAAAAATTGCAAAAAAATTGTTCTACTAACTAATCAATGTTCCCTGTTCGCGCAGGGATAAACTGAATTTGACGTAATACGTAGTGGTTTATCTCCTATGTTTCCTATACACAGGGATAAACCGCGCAAGTTTCAATGGGCATTCCGCCCACTACGATGTTCCCTGTGCACACAGGGATAAATCAGCGGGGGCGTCAATATTACATAGCATTTTTTACTATTCAAAAATCGCAATTCTATATTTCATTGTCTACCATTTTTTAATTATATGAAAAATATTAACTTATCGGTAGAATCCCGTAGAATCTAATTTTAATTTTCATCAATTTTAATTAATCAAATAAAAACATAGTGTTATAGAATGTGATTTTAATGAAAAATAACCTAAAAAATCGGTAGAAATTTGACGGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGA # Right flank : GTAATGAAAATTTAACGACATTCAAATAATGGAAAATGAAGCGTTAAGAATTAGGCATAAATCAAAGTGATCAATTAATTATATTGTGTATAATTTAATTACTTTATTTATTTCAGTTGTAACTATTTGGAACTTCAGTGTTAAAAGATGAAAAGAGATTGGGAATTAATTAGAAAAATAATGCTAGCTATAGAAGACTCTCCATGTGATATGAAAATATCGTCATTTTCGATTAAAGGCTATGATCCTGAGATTGTTGGTTATCATATAAAACTACTTAATGATGCACGTTTAGTTGAAGCCATTAATTCAAGTAGTGATCGAATGATGTATGAATATTATACTCAAGACTTAACGTTAGCAGGACATGAATTTTTAGATAATATTAGAAGTGATACAAATTGGAACAAAATAAAGAATCTTATTAAAGGTAAAGGTGGTGAGTTAACCTTTGAAACCATAAAAGCGGCAGCTTCTTATATGATTGTAAATTTGTTTTC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTACACACAGGGATAAACCG # Alternate repeat : GTGTTCCCTGTATACACAGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 119656-120111 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000003.1 Gilliamella sp. W8136 NODE_3_length_215774_cov_278.580183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 119656 29 100.0 32 ............................. GTAACTTTTCATTAAAAGAACGCGAAGAATTG 119717 29 100.0 32 ............................. TCGACAGTTGTTTTTAATTTTGAATTTTTCCC 119778 29 100.0 32 ............................. TCCTAAAATTGTATTGGTAAACACTTTTATCA 119839 29 100.0 32 ............................. GCGTTAACCACATCGCCAGCATCCAGACCCAA 119900 29 100.0 32 ............................. GCTGCATATTGTGATTTAGGCTGTATTGATTT 119961 29 100.0 32 ............................. AATTGTGAAATCACACCGATTCAAAAGGCTAT 120022 29 100.0 32 ............................. GTCGATGGATTTAGAGAGCGTCAAGTTGACAT 120083 29 93.1 0 .T..........................A | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.1 32 GCGTTCCCTGTATACACAGGGATAAACCG # Left flank : ACATTTAAATTAAACTTAAGGTGAAGTTAATTTCACCATAAGAGTAAATTATGATAACCATGGCGATACAATTACCAAAAAAGTAGATATTTGTATTGGTTACCGAGAAAGTCAGGCATTTCCTCTATATAGGGGTAAAATATGTCAAAAAGTTTCAGGTTAACCATACGTTTCAGTATAAATATCAATAAACAATTTAGCTTAACTTTATGTTCCCTGTACACACAAGGATAAATCGGCGGGCATCAATATTACATAGCATTTTTTGCTATTCAAAAATCGCAATTATATATTTCATTGTTTACCATTTTTTTAATTATATGAAAAATATAAATTTATCGGTAGAATCCCGTAGAATGTAATTTTAATTTCTATTAATTTTAATTAATTAAATAAAAACATAGTGTTATAAAATGTGATTTTAATGAAAAATATCCCAAAAAATCGGTAGAAATTTGACAGTCAATATTTTAATTATAAAACAGTATGTTATAATTAGA # Right flank : AATATATTCTATAGATAAAACTCGTTATTATTAATAAGAACAATATTGTTAATTTAGGGATAATTTTTCAGGTAAGCGTTTGAGAATGATAACTTAAAAAAATTATAAAAAATCTTCTAAAAAAGGGATTTAATTATCATAAACCAAATGATATGGTTGATTTCTTGAAATTTCGGACTTTTCCCAAATCTTATTGGTCTCACGATAATTTTTTGTGTATCAAACAATTTATTTTGTTAGAAATGGTACTCAAATATGATTTATTGCCAATTTCGAAATTAACCAAGAAAAAAATTATAATGATAAAACATTTAGAAGTTACATCAAACTATTTGCTAAATCTAAAACGTCGAAATTGAGATAATGATTTTTAGTTGAATTAGTTAATGAAGTAAACAATTTAATTAGTTCTGTTAACCAAATAATTACTGCAATAATAATTCATGATGATAATAAATTACTTTTAGCAGAGAAAATAAGAGATTTGCTTAATAAAATTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 93921-94193 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000013.1 Gilliamella sp. W8136 NODE_13_length_123483_cov_282.462123, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 93921 29 93.1 32 ............TG............... TCTCACCGAGAGGCTAAAGAGAAGCTTGAAAC 93982 29 96.6 32 A............................ ATAGAGTCGAAACGTCAATTTTTTCACCCTCT 94043 29 100.0 32 ............................. AAAATTCTAGTAATAAAAAAGTTAATATTATT 94104 29 100.0 32 ............................. ATAAATTCTAGAATCAATATTAATGTTTTGCT 94165 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.3 32 GTGTTCCCTGTACACACAGGGATAAACCG # Left flank : TCAGTATAAAAATCAATAAATAATTTATTTTAACTCTATGGTGATAAACAAAATACCATGTTGAGCTAACATAAATGTTTACTTTTCATATTGAGTAATAGATCATAAATAACAGTGCTTATAAAATTATTTTCATTCAAAAAAATATATTGGATTACTCAAAATCATAGAAATGTACCTACAAAAAACGAGTACTTGAGATTAATTTGTGAAAATTTTAAAACCAAGCTAAATCAGCAAATAACTTAAAAAGTAGAGTTATTTTGATAACAGTAAAGTATTAAAAACATCTCAATAAAAATTACTGTTTTTTAACTACATGAAAAATATAAATTTATCGGTAGAATTCTGTAGAATCGATTTTTAATTTTCATCAATTTTAATTAATTAAATAAAAACATAGTGTTATAAAATAATGATTTTGATAAAAAATAGCCTAAAAAATCGGTAGAAATTTGGTGGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : GGCGATGCGTCAATATTACATAGCATTTTTTACTATTCAAATAATCGCAATTCTATATTTCATTGTTTACCATTTATTTAATTGCATGAAAAATATGAATTTATTGGTATAATTCCGTAGAATCGAATTTTAATTTCCATCAATTTTAATTAATTAAATAAAAACATAGTGTTATAAATATAGATTTTGGTAAAAAATAGCCTAAAAAATCGGTAGAAATTTGGTTACCAATATTTTAATTATAAAACAGTATGTTATAATTGGGGTGTTCCCTGTATACACAGGGATAAACCGTAGACAGTGGCGCTATGACGTATGAAGAGGGCGTGTTCCCTGTATACACAGGGATAAACCGACAAACATTAGCTGAGGGAGCGTTATATAGCTGTGTTCCCTGTATACACAGGGATAAACCGTGTCATTAGTACTATAGCCTAAATCTCGCATTGTGTTCCCTGTATACACAGGGATAAACCATAATTGTTCAAATAAATGTTTAA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTACACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.00%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 94458-95155 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000013.1 Gilliamella sp. W8136 NODE_13_length_123483_cov_282.462123, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 94458 26 100.0 35 .......................... CCGTAGACAGTGGCGCTATGACGTATGAAGAGGGC 94519 26 100.0 35 .......................... CCGACAAACATTAGCTGAGGGAGCGTTATATAGCT 94580 26 100.0 35 .......................... CCGTGTCATTAGTACTATAGCCTAAATCTCGCATT 94641 26 100.0 35 .......................... CCATAATTGTTCAAATAAATGTTTAAAACTATCAC 94702 26 100.0 35 .......................... CCGGCAAAAAAAATAATGACAGGTTGGGTAATTCC 94763 26 100.0 36 .......................... CCGAGGTGATTAAAATGGAAAAAGAATTAGACACAT 94825 26 100.0 35 .......................... CCGCGTTACTCTGACTATCACCGATAATAGCGCGG 94886 26 100.0 35 .......................... CCGATTAATTATGTCAGAGAAATTAAAAATAATGC 94947 26 100.0 35 .......................... CCGCTAAAAGAAAAAAATACAACTTGGAGTGATAT 95008 26 100.0 35 .......................... CCGACGGTTTTTTAGGTTCAGGAGGCGGTTCGGGA 95069 26 100.0 35 .......................... CCGATTGCTCGCGCAAGGATTTAAGCTGATTCATC 95130 26 76.9 0 A..AA........T.....A...T.. | ========== ====== ====== ====== ========================== ==================================== ================== 12 26 98.1 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : AGAGGCTAAAGAGAAGCTTGAAACATGTTCCCTGTACACACAGGGATAAACCGATAGAGTCGAAACGTCAATTTTTTCACCCTCTGTGTTCCCTGTACACACAGGGATAAACCGAAAATTCTAGTAATAAAAAAGTTAATATTATTGTGTTCCCTGTACACACAGGGATAAACCGATAAATTCTAGAATCAATATTAATGTTTTGCTGTGTTCCCTGTACACACAGGGATAAATCGGCGATGCGTCAATATTACATAGCATTTTTTACTATTCAAATAATCGCAATTCTATATTTCATTGTTTACCATTTATTTAATTGCATGAAAAATATGAATTTATTGGTATAATTCCGTAGAATCGAATTTTAATTTCCATCAATTTTAATTAATTAAATAAAAACATAGTGTTATAAATATAGATTTTGGTAAAAAATAGCCTAAAAAATCGGTAGAAATTTGGTTACCAATATTTTAATTATAAAACAGTATGTTATAATTGGG # Right flank : ATCAATTGTAGACATGAACTTTAACCTTACTGAGTTACAGTTGTTTCGTATTTGTAAACAAACATTAGCCATTGCCATAGACCCGTTTAATGATTTGCGAGAAAAAACAGAATCGCCAGTATTAAAACGGTTATGCTTTATCACCATTAAAGAATTACAGGCGCACAAATGTGATTCGTCAAAACTCTTACTTTCTCAGATATCCGTTCATAACCAAATATCTATTTACATTCATTAATATAAAAAATAGGATTTATATAGTTATATTGTATAAAATATTTCCATATTAAAAATGAATATAAAGCACTTGAGAATATAGCATGATTCAACAAATAGCTGTTTTGGGTGATGTAACCAATTATGACGGAAGGATTATTACAGCCTCAGGGAACGGTTATTGTGGTATTGATGGTATCGCCTTATTGGGTGATTTAGCATCTTGCCCTAAATGTAGAAGTACAGGCAGAATCATAGAGGGAGCAAACGATTTTGTTATCGAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 97788-98122 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000013.1 Gilliamella sp. W8136 NODE_13_length_123483_cov_282.462123, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 97788 29 100.0 32 ............................. TTGTCTGCTCCCTCTATAATTCTGCCTGTGCT 97849 29 100.0 32 ............................. CGTATGAATAGATTTACAAATGTTTGCAATTA 97910 29 100.0 32 ............................. CTGTTAATGGTGGCCCCTACTGGACTTGAACC 97971 29 100.0 32 ............................. AAATTAAAATATATTTTTAATCCGCATATTGC 98032 29 100.0 33 ............................. CTAGTAACTGAATCATCTGAAGCTGAAAAAATC 98094 29 82.8 0 G...........CA............T.A | ========== ====== ====== ====== ============================= ================================= ================== 6 29 97.1 32 ATGTTCCCTGTATGCACAGGGATAAACCG # Left flank : TTAGTATAAAAAATCAATAAACAATTTATTTTAAATTCATGTTTATAAACAAAATACCATGTTGAGCTAACATAAATGTTTACTTTTCATATTGAGTAATAGATCATAAATAACAGCGCTTATAAAATTATTTCAATTCAAAAAAAAATATTCGATTACTCCAAATTACAGAAATGCACTTACAAAAAACGAGTACTTGAGATTAATTTGTGAAAATTTTATAACCAAGCTAAATCAGCAAACAACTTAAAAAGTAGAGTTATTTTGATAACAGTAAAGTATTAAAAACATCTCAATAAAAATTACTGTTTTTTAACTACATGAAAAATATAAATTTATCGGTAGAATTCCGTAGAATCTAATTTCAATTTCCATCAATTTTAATTAATTAAATAAAAACATAGTGTTATAAATATAGATTTTGGTAAAAAATAGCCTAAAAAATCGGTAGAAATTTGGTGACCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : ATATTAGATTAGAAGTTGTTAATTTTCTAAGAATAGGATGGATTTTAAGTATTATTTATACGACACAGATTTGACTGATTAATGAGTTTTTTAAGGATTGCATGGTAAAAGTATAAAGTAAATGAATTTTCACTTATTAATATGAAGAAGCAATTAACCTCATAAATACCTAGTTATTTCACTGATAATGCTAAATAACGATTACAGAGTTTGTTTTTGTTTATAACTGAATATTACGATCTCTTTCCATAAAATAGTTTATGAAAAGTCTTCTTTTCAAAAGGAATTAATAATTTATTCACTTAACTGCTTTGGTGGTTTTTTATTGCCCAAATTATCTAAATAAAATACTATTACCCAAAATAAAATTTAAAGTATGAAAAAAATTTAATTATTTTATCATCTGTTATTATTTAAAAATCAATGGAAGTAAGGAATGAAAAATTTAATTGCTATTTCAATATTAACTTTGATCGGTTTCAACGCATTTGCTAATGATA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 100271-100788 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000013.1 Gilliamella sp. W8136 NODE_13_length_123483_cov_282.462123, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 100271 29 100.0 32 ............................. GGCAGGATGACGGGACATGGTTTTAGGTCATT 100332 29 100.0 32 ............................. TTCACTGCTTAAGTTGGGTTGCAATAGAATGC 100393 29 100.0 32 ............................. AGAATGGATAATAAGAGGATTGTCCATTTTTG 100454 29 100.0 32 ............................. TAACATTATAACTTATGTTTGGCATTTCTTTA 100515 29 100.0 32 ............................. TACGCGGCCGAAAATGCATAAAAATTTACAAT 100576 29 100.0 32 ............................. AGATATGACAGATAAAACAGAAAAAGACATTA 100637 29 100.0 33 ............................. CGGAATATTCTCCTTTTTTATTTTTATCTAATT 100699 29 100.0 32 ............................. CAATAACTAATTTATCTTTTATTGTTGGATAG 100760 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================= ================== 9 29 99.6 32 GTGTTCCCTGTATGCACAGGGATAAACCG # Left flank : TTATAAAACAGTATGTTATAATTGGTGTTCCCTGTATGCACAGGGATAAACCGGCGATTCAATTAATACCCGTTGGCGATCTAAACGTGTTCCCTGTATGCACAGGGATAAACCGGCATCAATACAAATACATCACCAGATGTTTGTGTGTTCCCTGTATTCACAGGGATAAACCGCGCCATGTTATTCCCCCATCGTCACATGTCTGATGTTCCCTACACACAGGGATAAATCGGGGGATGCGTCAATATTACATAGCATTTTTTACTATACAAATAATCGCAATTCTATATTTCATTGTTTACCATTTATTTAATTACATGAAAAATATAAATCTATTGGTAGAATTCCGTAGAATCGAATTTTAATTCCCATCAATTTTAATTAATTAAATAAAAACATAGTGTTATAAATACAGATTTTGGTAAAAAATAGCCTAAAAAATCGGTAAAAATTTGGTGGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGG # Right flank : GGGGATGCGTCAATATTACATAGAATTTTTTGCTATTCAAATAATTGCAATTCTATATTTCATTGTTTACCATTTATTTAATTTAATGAAAAATATAAATTTATCGGTAGAATTCCGTAGAATCAAATTTTAATTTCCATCAATTTTAATTAATTAAATAAAAACATAGTGTTATAAATTCTAATTTTGATAAAAAATAGCCTAAAAAATTGGTAGAAATTTGGTGGTTAATATTTTAATTATAAAACAGTATGTTATAATTGGGGTGTTCCCTGTATGCACAGGGATAAACCGAGCGTCTAAAACGCGAGAAATTCGAATTAACCGTGTTCCCTGTATGCACAGGGATAAACCGGAAAAACGTTACGATGTATTTATATCTGACGGGTGTTCCCTGTATGCACAGGGATAAACCGCTTAGATGTTTCCATATGCTCAATGATCACACCGTGTTCCCTGTATGCACAGGGATAAACCGAATAGTTAATTCGTGGTTTTTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 101053-101692 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQU010000013.1 Gilliamella sp. W8136 NODE_13_length_123483_cov_282.462123, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 101053 29 100.0 32 ............................. AGCGTCTAAAACGCGAGAAATTCGAATTAACC 101114 29 100.0 32 ............................. GAAAAACGTTACGATGTATTTATATCTGACGG 101175 29 100.0 33 ............................. CTTAGATGTTTCCATATGCTCAATGATCACACC 101237 29 100.0 32 ............................. AATAGTTAATTCGTGGTTTTTAACGTCAGCTA 101298 29 100.0 32 ............................. ATTTCATTAATGAAATGAGCGCAACTAATGCT 101359 29 100.0 32 ............................. TAATTACCAGTATTCATTATTTGAATCATTGT 101420 29 100.0 32 ............................. AGAAATCAGTAATTGATGACATGCCTCAAAAT 101481 29 100.0 32 ............................. TCAGGAAACAAGGTTTAAGACAAACTGTTATA 101542 29 100.0 32 ............................. GCAAGATTTAACTGATAACACTGCAATTACTG 101603 29 100.0 32 ............................. TTCCAGTTTATCTAAATGAATCTGTGGAATAT 101664 29 79.3 0 .......................TCTTTA | ========== ====== ====== ====== ============================= ================================= ================== 11 29 98.1 32 GTGTTCCCTGTATGCACAGGGATAAACCG # Left flank : GAAAATGCATAAAAATTTACAATGTGTTCCCTGTATGCACAGGGATAAACCGAGATATGACAGATAAAACAGAAAAAGACATTAGTGTTCCCTGTATGCACAGGGATAAACCGCGGAATATTCTCCTTTTTTATTTTTATCTAATTGTGTTCCCTGTATGCACAGGGATAAACCGCAATAACTAATTTATCTTTTATTGTTGGATAGGTGTTCCCTGTATGCACAGGGATAAATCGGGGATGCGTCAATATTACATAGAATTTTTTGCTATTCAAATAATTGCAATTCTATATTTCATTGTTTACCATTTATTTAATTTAATGAAAAATATAAATTTATCGGTAGAATTCCGTAGAATCAAATTTTAATTTCCATCAATTTTAATTAATTAAATAAAAACATAGTGTTATAAATTCTAATTTTGATAAAAAATAGCCTAAAAAATTGGTAGAAATTTGGTGGTTAATATTTTAATTATAAAACAGTATGTTATAATTGGG # Right flank : ATTAAGAAAGTTCTGGCCAGTCAATCTTCATATCTCATGCCTACTCAGGGGGATTTTTTATTCTGCAAACTTATTTTTGTGATCATATCGATTATGGTGGATAGTATCACTTATTAAGTAGTTGTAAATTTCATCTACAATTTCTATCCCATTTTTTAAGTAATCCGCTTCACGTTTTTTGCCACGTTCACCAGAAAAAAAGACTTCACTATTTCCTTTGGCGGGTTTAACGTGTTTTAGTTGATCCAGCATGGCTGACATGTTCTTTTTGAACGTTTCAAGACCGATAAAATAATCGGGGTTGATAACAATATGCAAATGTCCAAGATCGCGTCCTTTGGACAAGTCGGCATACATGGATGAGACGTTTTTGCCAAATGGTACACCTAATAAAATGCCTGACAACACATCCACCATCATCATTAGCCCATAACCTTTGGCATCCGCTATTGGTAATAGAGCGTTGACTTTGTGTGGATCGGTTGTTGGTTCACCTTGTT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATGCACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //