Array 1 127533-128953 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHPXW010000010.1 Phocaeicola vulgatus strain MSK.8.30 NODE_10_length_129397_cov_167.861, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 127533 33 97.0 33 ................................T CATACCAATATGAACCGTTAGCAATGTTTGCAT 127599 33 97.0 33 ................................G TCAACAATCATCTCAAGACGTGAATACCCAACA 127665 33 97.0 35 ................................C CACTGAGGACGAAACTGCGAAAGCATACAAGAAAA 127733 33 97.0 33 ................................C GTAAAAGTGATAGAGCATATTACAGACGATGCT 127799 33 100.0 36 ................................. AAAAGTTAGAAAGGCTATTGGATGAGCTGAAAGAAC 127868 33 97.0 34 ................................T GTTATTCCTATAAGTGATGAAGAATTGGAGGACT 127935 33 100.0 32 ................................. GTGCTCCTGCCCTTTGGGCGAAGTACGGATTT 128000 33 100.0 32 ................................. CGTTAAAGGAGGCTGTAAAAAAGGGAATTAAA 128065 33 97.0 33 ................................T TTGGCTCATAAGATTTACTCTGGCAAGGGAGAA 128131 33 97.0 33 ................................T CTCAATGTCCATTTCCGCAAAATTTTTATCGTA 128197 33 100.0 32 ................................. AACAATACTCCGTCTTCTAATGCTTCAACGAG 128262 33 97.0 32 ................................C TACACGAAATGAATCCCGTGGAAATAACTGAT 128327 33 100.0 33 ................................. ATGTAACGAAGATCCTTTTTATTGTTCGGTTCT 128393 33 100.0 32 ................................. AAAGAGAATGTAAGTAGGATGAGTAATGTATA 128458 33 97.0 33 ................................C CTCTTGCCGTGGCAACACCTCTATCACCAGCCG 128524 33 97.0 34 ................................T TTTAGATTGAAACATTTCTTAGAGGCCTTATGCC 128591 33 97.0 32 ................................C TTGTATGTGGAACTCCTTATTCTTCTTCGCCT 128656 33 100.0 33 ................................. CTTATCTCTAGCTTATCTTTAGAGATCACAATG 128722 33 97.0 33 ................................G ATGCCATGTATCTGTATGACTGCTACTGCGAGG 128788 33 97.0 33 ................................C GAGGAAACCGCACAACTCGAGCACCTCAAGCAA 128854 33 100.0 32 ................................. TCGAATAGCGTCCAAACGGGGTGGCCGATTTC 128919 33 93.9 0 ....................A.........G.. | TA [128938] ========== ====== ====== ====== ================================= ==================================== ================== 22 33 98.0 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAACTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGTTTATTTGTTATATTATTGATTATTAATGTGTTGTTATCTGTTTGTATCGATTGTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCT # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //