Array 1 4384-3868 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QFTX01000005.1 Klebsiella pneumoniae strain P080C P scaffold_000005, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
      4383	    28	 100.0	    33	............................	CGACGTTCGCCTGATGCGAACGGTTGACGGCTA	
      4322	    28	 100.0	    33	............................	CGTCGACATGCTTACCGATGAGCTCGAGGTTTT	
      4261	    28	 100.0	    33	............................	CTGGCTGTCACAGGCACGTTTGGCGTTACGCAG	
      4200	    28	 100.0	    33	............................	CGAAACCCAGATACCGGTAAGCCAGATTCTGGC	
      4139	    28	 100.0	    33	............................	TTCCATCATCTGCGGCGGGATAGCGCTGCGGGT	
      4078	    28	  96.4	    33	............C...............	CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG	
      4017	    28	  96.4	    33	............C...............	CCTGCAGCTGGCCGTCGAGCTGACGAATGCCGG	
      3956	    28	  96.4	    33	..............T.............	TTCATCACGTGTGAGCGGATTTGGCTCTATCCT	
      3895	    28	  92.9	     0	...................A.......T	|                                	
==========	======	======	======	============================	=================================	==================
         9	    28	  98.0	    33	GTCTTCCCCACATGCGTGGGGGTGTTTC	                                 	       

# Left flank :   TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTTGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT
# Right flank :  CGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGTATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGATATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATGT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTCCCCACATGCGTGGGGGTGTTTC
# Alternate repeat :   GTCTTCCCCACACGCGTGGGGGTGTTTC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [9,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.80,-11.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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