Array 1 333-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCKZ010000317.1 Vibrio parahaemolyticus strain Vb0541 K-12_740c, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 332 28 100.0 32 ............................ AATTTGATACTGTGACATTGGCAGCATCAAAT 272 28 100.0 33 ............................ GTAAAAATGGCGCAACTATCCTAACAATATTCA 211 28 100.0 32 ............................ TTATCAGTATGTTGCGGTTGGTCTTCCTACTG 151 28 100.0 32 ............................ TTCATGTTTCTCATCTTCCTCCTGATTTAAAC 91 28 100.0 32 ............................ TTATTTTATATACTGCGGTTGGTCGTTGTCTT 31 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GATACTGTGACA # Right flank : AGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //