Array 1 61051-59000 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMVC010000001.1 Flavonifractor plautii strain BSD2780061687_150420_F5 NODE_1_length_352986_cov_7.67853, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 61050 33 100.0 33 ................................. GGGTTCCCTCCCCTTTTCCAGCTCATGGAGGGC 60984 33 100.0 35 ................................. AGAGATAAGAGGTGAATTAAATATGACCATCATCC 60916 33 100.0 33 ................................. GTCCCGCAGCGCCTCGGGGGTCTTGGCATCGCG 60850 33 100.0 37 ................................. CAAATGATATGAAGCATATACATACACATGCAATTGG 60780 33 100.0 34 ................................. TTAAATTTATCGGGCATATCCTGAAAAGCACCCG 60713 33 100.0 35 ................................. TGTCCGAGTTTGACAGTGAGGATGATGCAAAGGAA 60645 33 100.0 34 ................................. TAGTGTAAGATATTGCACACCCCACTGACAAGCG 60578 33 100.0 34 ................................. AAAAATTATGAAAGTTGTAGCGAATGGGCAGAAG 60511 33 100.0 34 ................................. TGCTCTGTGTTCCTTCATAACCCACAGGAAGCAT 60444 33 100.0 34 ................................. TATAAGCCATCTAGCGGCCCTCCTTTACTTAAAA 60377 33 100.0 33 ................................. ACACAGGTATACGTGATGATACATATTATACAA 60311 33 100.0 33 ................................. GTTAAGAGTGGAAAAACTGCTGATTATGCAGGG 60245 33 100.0 33 ................................. AAAAATTATGAAAGTTGTAGCGAATGGGCAGAA 60179 33 100.0 35 ................................. CTGGCCGGGGCATCATAGGTGTTGACGATGTCCAT 60111 33 100.0 34 ................................. TATGACACAATCACCGGGAGGCCCGTCGGCAACC 60044 33 100.0 35 ................................. CATGCGAGACTTTTCATCTTCGCCCAAGGCAAGCA 59976 33 100.0 33 ................................. TTTTGTTGCGCCTTTTGGGCGAATCCTTCGCAA 59910 33 100.0 33 ................................. CATCCGGCGTCCGCCTTGACCGTGCCATCAATC 59844 33 100.0 34 ................................. ATTGTAGAGGTAAAATCAACCCATCCGCCGCCGG 59777 33 100.0 34 ................................. TGTAAGGCCCCTATATCATCTAACCAGCCTATAA 59710 33 100.0 36 ................................. GGAATTAACTCTATCGCCAACTTTTACAGCAAAACT 59641 33 100.0 33 ................................. AGCAGGATATCCACTATCAGACTGCGGGTTATA 59575 33 100.0 35 ................................. CTCCGGCAACCTCTCCTTGACGCTGATCCACTCGC 59507 33 100.0 36 ................................. CATAGGCATCCTCGTTAAATGCTCTACAATTTGTAA 59438 33 100.0 35 ................................. ATCAACACTTTAGTAAGTGCATCCTCAATCTTTGC 59370 33 100.0 34 ................................. AGCAAAGGCAAGGCGGTGAAAAATCACCGCCTCC 59303 33 100.0 35 ................................. TGGTTTGTTAATCTTAAATATGCACCTACAGAATC 59235 33 100.0 33 ................................. ACCCTTGGAGTTATAAACACGCTGGTAAACACC 59169 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 59098 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 59031 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 31 33 99.6 34 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCACCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGCGCAATCATGGACCCCGAACGGGACAGTCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCCCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //