Array 1 167207-164557 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHTF01000010.1 Klebsiella pneumoniae strain KP_346 NODE_10_length_213562_cov_33.3571, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 167206 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 167145 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 167084 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 167023 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 166961 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 166900 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 166839 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 166778 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 166717 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 166656 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 166595 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 166534 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 166473 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 166412 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 166351 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 166290 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 166229 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 166168 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 166107 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 166046 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 165985 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 165924 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 165863 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 165802 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 165741 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 165680 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 165619 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 165558 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 165497 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 165436 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 165375 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 165314 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 165253 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 165192 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 165131 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 165070 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 165009 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 164948 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 164887 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 164826 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 164765 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 164704 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 164643 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 164585 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTGGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //