Array 1 84736-84282 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACVJZ010000043.1 Francisella philomiragia strain FSC039 FSC039_42_len131496, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                                            	Insertion/Deletion
==========	======	======	======	====================================	===========================================================	==================
     84735	    36	  80.6	    59	T...T....T......A...GG...........T..	CAAAATGCTAAAAAAATCATAGATTTTAGGTCTTTTTTTGCTGATTTAGGTAAAAACGG	T,A,G [84715,84724,84727]
     84637	    36	 100.0	    29	....................................	CTCATTTAGAAATTCAATTTTTAAATTCT                              	
     84572	    36	 100.0	    27	....................................	AACCCTAAAGATTCTAACGGTGTTATT                                	
     84509	    36	 100.0	    27	....................................	GAAATGGTGGAGTAATGCCAAGCAACG                                	
     84446	    36	 100.0	    28	....................................	GGACTATTCTTTTAATGTTTGATACATA                               	
     84382	    36	 100.0	    30	....................................	ACTTGATACTATATGTACGAACATTTAGAA                             	
     84316	    35	  75.0	     0	......A...A.....A....-..GT.AA.....G.	|                                                          	
==========	======	======	======	====================================	===========================================================	==================
         7	    36	  93.7	    34	GTCTAAGAACTTTAAATAATTTCTACTGTTGTAGAT	                                                           	       

# Left flank :   GTTGCAAAAATGAGCAGTTTTATATAAAAAAAGATAAAACAAAAGACTACTCAAAAATACTTTTTGCCGAGATTATCAGCTATAAGCTAGAGATATTTGAATATGTAAGAGAATTTTATCGTGCCTTTATGCGAGACAAAGAAATTGCAGAGTATCCAATATTTTGTTATGAAACTAGGAGGGTGTATGTTGATAGTCAGTTATGATTTTAGTAATAATAAAGTACGTGCAAAGTTTGCCAAATTTCTAGAAAGTTATGGTGTACGTTTACAATATTCGGTATTTGAGCTCAAATATAGCAAGAGAATGTTAGACTTGATTTTAGCTGAGATAGAAAATCACTATGTACCACTATTTACAAATGCTGATAGTGTTTTAATCTTTAATGCTCCAGATAAGGATGTGATAAAATATGGTTATGCGATTCATAGAGAACAAGAGGTTATTTTTATAGACTAAAAATTGCAAACCTTAGTCTTTATGTTAAAATAACCACTAAG
# Right flank :  TAGAATTATGTTTTTTAATAGTATTTAATAGCTTTCTATACAAATTGTAGCTTCGGGCATGTCTGGGAATGTAATTAGATAGCTACTGTTAATATTTATTTATATTTTGTATATAGCTTTCATTTTTAAAACTCTTATCCAAAATCGTCAATACATCATCATGAAATCTCTCTCTTTTTTGCTGTGTAGATCTACCACAGAACAACTCAGCGAATCTACTAGTTGGCCATTCAGCATCGACATGTACAGCTCCATCAATTTTGATAAGATTGTTTTCTTTTAGATTTGTTATGAAGTTTTTGTAGTTGTTATTGGTATTACATGCGCTTGCTGAGGCAGCTATTATATAGGTTGGGCAATTTATATTCTTGGCAGCTTGAGAGCCAAGATTGCCTACATCTACAGGGTCTAATCCTATCCAAAGCTTGACCCTAGTATTCTCTGATGTCGCTATCAAAGTAGCTAATCCTCCAGCAGAGAAACCAACCAAAGCAAGATCA

# Questionable array : NO	 Score: 6.00
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTAAGAACTTTAAATAATTTCTACTGTTGTAGAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//