Array 1 45863-46316 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACTRS010000002.1 Francisella philomiragia strain F1145 philomiragia_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                                            	Insertion/Deletion
==========	======	======	======	====================================	===========================================================	==================
     45863	    36	  80.6	    59	T.......TA......A...GG...........T..	CAAAATGCTAAAAAAATCATAGATTTTAGGTCTTTTTTTGCTGATTTAGGTAAAAACGG	T,G,T [45865,45868,45882]
     45961	    36	 100.0	    29	....................................	CTCATTTAGAAATTCAATTTTTAAATTCT                              	
     46026	    36	 100.0	    27	....................................	AACCCTAAAGATTCTAACGGTGTTATT                                	
     46089	    36	 100.0	    27	....................................	GAAATGGTGGAGTAATGCCAAGCAACG                                	
     46152	    36	 100.0	    28	....................................	GGACTATTCTTTTAATGTTTGATACATA                               	
     46216	    36	 100.0	    30	....................................	ACTTGATACTATATGTACGAACATTTAGAA                             	
     46282	    35	  75.0	     0	......A...A.....-..A....GT.AA.....G.	|                                                          	
==========	======	======	======	====================================	===========================================================	==================
         7	    36	  93.7	    34	GTCTAAGAACTTTAAATAATTTCTACTGTTGTAGAT	                                                           	       

# Left flank :   GTTGCAAAAATGAGCAGTTTTATATAAAAAAAGATAAAACAAAAGACTACTCAAAAATACTTTTTGCCGAGATTATCAGCTATAAGCTAGAGATATTTGAATATGTAAGAGAATTTTATCGTGCCTTTATGCGAGACAAAGAAATTGCAGAGTATCCAATATTTTGTTATGAAACTAGGAGGGTGTATGTTGATAGTCAGTTATGATTTTAGTAATAATAAAGTACGTGCAAAGTTTGCCAAATTTCTAGAAAGTTATGGTGTACGTTTACAATATTCGGTATTTGAGCTCAAATATAGCAAGAGAATGTTAGACTTGATTTTAGCTGAGATAGAAAATCACTATGTACCACTATTTACAAATGCTGATAGTGTTTTAATCTTTAATGCTCCAGATAAGGATGTGATAAAATATGGTTATGCGATTCATAGAGAACAAGAGGTTATTTTTATAGACTAAAAATTGCAAACCTTAGTCTTTATGTTAAAATAACCACTAAG
# Right flank :  TTAGAATTATGTTTTTTAATAGTATTTAATAGCTTTCTATACAAATTGTAGCTTCGGGCATGTCTGGGAATGTAATTAGATAGCTACTGTTAATATTTATTTATATTTTGTATATAGCTTTCATTTTTAAAACTCTTATCCAAAATCGTCAATACATCATCATGAAATCTCTCTCTTTTTTGCTGTGTAGATCTACCACAGAACAACTCAGCGAATCTACTAGTTGGCCATTCAGCATCGACATGTACAGCTCCATCAATTTTGATAAGATTGTTTTCTTTTAGATTTGTTATGAAGTTTTTGTAGTTGTTATTGGTATTACATGCGCTTGCTGAGGCAGCTATTATATAGGTTGGGCAATTTATATTCTTGGCAGCTTGAGAGCCAAGATTGCCTACATCTACAGGGTCTAATCCTATCCAAAGCTTGACCCTAGTATTCTCTGATGTCGCTATCAAAGTAGCTAATCCTCCAGCAGAGAAACCAACCAAAGCAAGATC

# Questionable array : NO	 Score: 6.00
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTAAGAACTTTAAATAATTTCTACTGTTGTAGAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//