Array 1 31064-31892 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHE01000103.1 Geobacillus subterraneus strain K contig3382, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 31064 30 100.0 36 .............................. CAATGACGAGCCGCCAACCACCCATCATTAGTCGCG 31130 30 100.0 35 .............................. TAGAATTCCTCCAAGCAAATGTAATCGTGCGCTTT 31195 30 100.0 38 .............................. ATGGATGAGGAAAGTTTGCAGCTGTCCCTTTTTGAAGA 31263 30 100.0 35 .............................. ACGGACATATTGACAGGGGTTCAAACGATTGCGGA 31328 30 100.0 38 .............................. TTTTACCAAGATACAACACATGAAAAAGGCATCCATTT 31396 30 100.0 37 .............................. ATCTCATATCTTCTTAAAGCTTTGCGAAACTCTTGAA 31463 30 100.0 35 .............................. TAGTTATGTTGAATCCCGATCATAGTGTCGATGAA 31528 30 100.0 38 .............................. TAGCGAAGAAAACACCGAAGCACAAAAAGCCGGACACG 31596 30 100.0 40 .............................. TTCGCGCCTGGCGACATCGTTTTGATTTACGACCCGTACG 31666 30 100.0 36 .............................. ATTCCCCCTTAATGAAATTGGCTTGCCAAAAACACC 31732 30 100.0 36 .............................. CAAGAAACCAAAGCACTCGCCCCGAAACGAACGGGC 31798 30 100.0 35 .............................. TACTCACTCGTACCGTTCCAATCGGACTGTTTCGG 31863 30 83.3 0 .C.........C..C..C..T......... | ========== ====== ====== ====== ============================== ======================================== ================== 13 30 98.7 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AATCCGGCGCTGTCCGACGACATCATCCGCGTCGCCCGCTCGCCGATCCGCAAACTTGGACCGAACGACCGCCTCGTCGCGCCAGCCGTGCAATATTGCGCCTTATTCGGCAACGCCCCGCAAGGCTTGGCTAAAGGAATCGCCGCCCTCCTGCGGTTCGATGATGCCCGCGATGCGGAAGCCGCTGCCCTTCAACAAACAATCGCCCAGCACGGGATCGAAGGCGCGCTTCGGCAATATGCAGGCCTTGAGAGTGGGCACCCGCTTGTGGCGGCGGTGAAGGACGAGTACGGAAGAATGAAGAAAAACAAAAACTGACCGTCTTGCAAATGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAGCAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCTCAGAGAGAAAAAGCTTGATTTGATGCGTATGGTTTGGGG # Right flank : CACTGTGTAGTACGGCACAACTTTTTCTGTCCCCCATGCAGGATTTTCACCCCCTGTTTGCGAATGGATAGAATCGAACACGTTCAAAGAGGGGTGATCGAATGGCCATTGACCATGACCGATTGTTCAAAGAGCTGATTCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTCCCCGACATCCACGAGCATATCGATTTCCGCCATTTGTCCTTTTTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGCGAAAAATACCGCGTCGATCTATTGGTCGAGACGAAGCTGAAAGGGGAAGACGGGCTGATCATTGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCTATGAGGCCCTTCGCGAGGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 40087-40925 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHE01000103.1 Geobacillus subterraneus strain K contig3382, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 40087 30 100.0 35 .............................. TCTCCTTTTAGTGAAACATTGTGGCCGCTATATTG 40152 30 100.0 41 .............................. AAATTTTCCAATACTTTTAATGTACGGTTCAATTTTATCCA 40223 30 100.0 38 .............................. TGGAAGAACACAAAGAGAGAACACAAGAGCAACCGATC 40291 30 100.0 36 .............................. AAAAACGAAGTGAAACGGTTGACCGAACTGACAAAA 40357 30 100.0 35 .............................. GAAGACGCATATCGCTACTTGGCTAGAGTGCTTCC 40422 30 100.0 36 .............................. ACCCGTGACCGCGTCGATCACAACGCCTCGCGGCGC 40488 30 100.0 39 .............................. TTGACAACGACGATCATGTGATCGAATTTTACACACGGA 40557 30 100.0 39 .............................. CACTGGACGTAAATTCGGTTCGAGAGTGATTACAGTAGA 40626 30 100.0 39 .............................. AGTTCGTTTTTTCAAGACACGATGATATGCTGTGTCCTC 40695 30 100.0 36 .............................. TAGCCGGCGCCGGGATAGCCTTTCTTCCTCGCCTCC 40761 30 100.0 36 .............................. TCCCGATGGTCGTTATGGAATACGAGAACTTGCGTG 40827 30 100.0 39 .............................. AAAATCGTGTACCGATGGAACCCGTCAACGATGATGAAC 40896 30 90.0 0 ..............C......A.C...... | ========== ====== ====== ====== ============================== ========================================= ================== 13 30 99.2 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGGGAGCGCAAATCGCCTACGCTCGGTTTACTGCCTTGCCGCCGCTTGTGTATGTGAGTGTGTTCGGGCGCTTGATATTGTCGCCGCTGTTGGCTGGGTCTTTGATCTTTCTATTAGGAATGGATGGCGTGACGGCTCAGGCATTGCTCATTGCCAGTTCGTATCCATGTTCACGCAATACGGCGCTGTATGCGCTCGAGTATGACTGCCACCCCGATTACGCCGCCCAGGCAGTGCTGGTGTCGACCTTGTTGAGCGCCATTACCGTGACAGGCACAGTATATGCGGCCCGTCTGCTGTTTCCGATTGGCGGATGAAAACGGGGGCAAGTTGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTTGCGTCAAACTCCTACAGCCAACGCGGCTAGACCGTATTGACAGAATTTTTGAAACGTGCTATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGCATGGTTTTGG # Right flank : CTGTCTCCTGCCACAGCTGAACCACCGCTGAGTTCAGCTTGTTTTACCGCTCGACATAGGAAAAGGACAAATGCGAAATGGCACATGCCAAAAAAACGCGGGGGGAAACAAGAAGGAATTCGGCCGCGAAGGGCGAATACAGTACGGTGAATCCGACATTGCAGGGAGGGAAAACGTGGCGAAGAAGCGAATTGACCATGACCGGTTGTTCAAAGAGCTGCTGTCGACATTTTTTGAGGAGTTTTTGCTTCTTTTCTTTCCCGACGTGTACGAGTACATTGACGTTCACCATCTCTCTTTCCTCTCCGAGGAACTGTTCACCGATGTGACGGCCGGAGAGAAGCACCGCGTCGACTTGTTGGTCGAAACAAAGGTGAAAGGGGAAGACGGGCTCGTCATTGTCCATGTCGAGCATCAAAGCTACACCCAGCGGACCTTCCCCGAGCGAATGTTCCTCTACTTCAGCCGCTTGTTTCAAAAATACCGCCGCCGCATTCTCC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 27783-26960 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHE01000116.1 Geobacillus subterraneus strain K contig3613, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 27782 30 100.0 38 .............................. TATGCTTGCGTTGTATTACCGACTTTTGGAGCATACAC 27714 30 100.0 36 .............................. AAACAGGCGTGCAGCAGTTCATGAACGAATGTTTGC 27648 30 100.0 36 .............................. GACTTTATTTGCTTTACATTTTCATCGTACTATGAA 27582 30 100.0 35 .............................. ACACCTAAATTCGGGATACCAATTGGATGAGAAGC 27517 30 100.0 37 .............................. TCCTTCTGCCGCTTCAAATACCCTTTCACCTTCTCAA 27450 30 100.0 36 .............................. AACGTCCCGATCATCGTCCTGGCGCAGCTCAACCGG 27384 30 100.0 35 .............................. GAACATCTTTTCAGAGCATAAGAAAACGCCTGTCG 27319 30 100.0 35 .............................. TCGAACTCTACTGCCTCCCGCCACTCGCTAGGAAA 27254 30 100.0 35 .............................. ATGATACGGACATGCACATCATAGTTCGGCGCATT 27189 30 100.0 34 .............................. TACCACAGCGATAATCTCAAGGGAACTATGATCG 27125 30 96.7 38 ........T..................... TGATGATCAGAAACTCGAGTCGTTGCAGTCGGTTTTTG 27057 30 90.0 38 ................C..C.....A.... ATAACTCAAACCCCAAGCTGCCTTCTTTGGCTTTGGCT 26989 30 83.3 0 .................A.C.A..GA.... | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 97.7 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AATCTTCGAAACGTGTTATTCTGATGATGACGTTGAAGGGAAAAGGTTGATATGACAACACTTTTTGG # Right flank : CGACACCTACGTTTGCTCATCCAACCGGTTTCTTTGTAAACATTTGTGATGAAAAGAACGGAACTCCCTTTTTTGTGCATCACGGTTTTATAAATTTTTGGTTTTTCTATTTTAAGGTTAGAGAGCTAACCACCGCGACAGGAGGCTTCACATCGATGCGCCAAAAACTTCGCGATCTCGGGTTTTCGATCGGCACGCTTCCGACAGGGAAGCGGAATCAAATTACGGATGTGTCCGGCGTTCGGGTCGGGCATGTGACGATTCGTGAAGAGCGGGATGAACGGACGGTGGTCCGCACTGGGGTGACGGCGGTGTTGCCGCATGGGGGGAATTGGTTTTTAGAGAAGGTGCCGGCGGCGTGCTTTGTCCTGAACGGGTTCGGGAAAACCGCGGGACTTGTGCAAGTCGAGGAGCTGGGGACGATCGAGTCGCCGATTATGCTGACCAATACGTTCAGTGTCGGCGCTGTCTGGCAAGGGACGCTTGAGTATATGCTTGCG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1396-505 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHE01000015.1 Geobacillus subterraneus strain K contig1385, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1395 30 100.0 38 .............................. GCCACGTTTCTGCATTGAGCAATTCAATGAGTTTGTCG 1327 30 100.0 37 .............................. CGTACATTTGATACCGAATATGTAGACGTTGACATTG 1260 30 100.0 36 .............................. ACCTCATCATGTTCAGTTATATAAACATATCCGTTC 1194 30 100.0 36 .............................. ACCTACATGTTTGACGCTCAAATACAAAGATACTAC 1128 30 100.0 36 .............................. CTTCACCGAATACAAACGCTTCATCGTCGCGCAATT 1062 30 100.0 36 .............................. CCGTATGGATTGACAGCTATGGCGGCAGTGTATTCG 996 30 100.0 35 .............................. CTTCACCGAATACAAACGCTTCATCGTCGCGCAAT 931 30 100.0 35 .............................. CCTTTATCCTCCGTCCGAGACGGTCGGGCGGAGTG 866 30 100.0 35 .............................. AACATCTATATCAACAGTGGCGGCGGATCCGTCTT 801 30 100.0 37 .............................. ATTGCCTCTTTCACTAAAGCAGGTGATAGGGTTTGGC 734 30 100.0 38 .............................. AAGAACCTTGCTTCGTTCGCCAGCTCCCCAAGCTCCAC 666 30 100.0 36 .............................. GCCTCGTCCGCAAAACAACGCTCACCGCAACACCTC 600 30 100.0 36 .............................. GCAGCCCAGCTTGCGGCACTCCTAGTTGAGTGCGCA 534 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 100.0 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AATCTTCGAAACGTGTTATTCTGATGATGACGTTGAAGGGAAAAGGTTGATATGACAACACTTTTTGG # Right flank : TTCGGCAGATGATCAAAGAAGGCCTGGAATCCGGGATTAGATTCGGCACAGCGAACCGGGAAATCTGCTTGTGTCTACTATATACATGCAACATAAAGAGTTAACTTCTCATCCTGCACACCCTAAGCGTTGCAGCACTTCCTCCGGACGTTCGTGGATGTAGTGGACAAACCGAGCAATGGCCTGGACGATATCGTTTCGATTTTTGTGAAACACATTGGCGATCACGGTGTCTTTCAGCCATTTCCACAAGCGTTCGATCGGGTTCAGTTGCGGAGAATACGGAGGAAGGTAAATAAAGTGAAAACACTGTCCTTCTTCCCGCAAAAACTCCTTGACCATTTTGGCATGGTGAATGCGGGCGTTATCCAACACCAAAACCATGAGACGGTCTAAATAGCGCTGTTTGAGCATTCTCAAGAAATCCAAGAACGTCGCGGCATTGGCAGCGGTCGTTTGATGAAGCACCGTTTCGCCATCGTGGATGTTGACCGCGCCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 10964-9330 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWHE01000068.1 Geobacillus subterraneus strain K contig2512, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 10963 30 100.0 39 .............................. CCGTATCCATTCGTTCTTTCACACACCGAGGAAACAGGC 10894 30 100.0 36 .............................. TCCGGTGCCCAATGCGGTTTAGCAGGGTAGCTGTCC 10828 30 100.0 37 .............................. AGTGTTGTCATAACCCCGCTACCGCAACAAGAACAAG 10761 30 100.0 39 .............................. TTAGCGACAATTTGAATGTGTCGAGCAATTTCTTGATCA 10692 30 100.0 35 .............................. TTAGATGTCGTGGAACATTTCCTGTTCGCGTTCAC 10627 30 100.0 41 .............................. TACAATGGAAAAACACGTCAAAAGTATCATGATAGTATCAT 10556 30 100.0 35 .............................. ACGCTAGATGAACAAAAAAATGATTTTGACCTTAT 10491 30 100.0 39 .............................. CGGTTCAATAACGAAGGAGGACGATATTTATGAGCATGA 10422 30 100.0 34 .............................. CCTTTTGACTAATCCGAATACTACGCAGATCGGC 10358 30 100.0 39 .............................. CCTCACGCGGGTCCATTCCGTCTCTCAATGTGAACACGA 10289 30 100.0 36 .............................. CGAGTTTACAAGGACAGACCGAGCCACTACCCGATA 10223 30 100.0 36 .............................. TTTTTGTTCTACATTTTTTAAAACGGGAGGTCATCA 10157 30 100.0 35 .............................. ATTCCAGGTCTCATCCGTCACCTTTCAGAACAGAG 10092 30 100.0 35 .............................. ATTCCAGGTCTCATCCGTCACCTTTCAGAACAGAG 10027 30 100.0 35 .............................. TTTAGCCACCAAAACACGCTCTACTTTTTTATCGC 9962 30 100.0 35 .............................. ACCTTGACACGTTCAGCAGTGTTCTCCCGTTCCCA 9897 30 96.7 39 .............................T GCTTCTGAGCTGTCCTACGAGCGTCACTATATGTTTTCC 9828 30 96.7 37 .............................T AAATAACCCGTCCGCCGGGTTGCAAACGGGTGGATAG 9761 30 96.7 37 .............................T TTCGCGTTTCCTTTCGCTCCGGCAAACTTCTTCACAA 9694 30 96.7 35 .............................T GAAACAAAATTAAGTGCTATCGATGAGCAATATCA 9629 30 96.7 37 .............................T GCGTGGTTTTCTAGCGAGGGCAATCGGCTAACCCGCC 9562 30 96.7 38 .............................T TCATTTCGCAGCCGCTTGGCGTCGTCCTGTCGCGATAC 9494 30 96.7 39 .............................T CTGCGCGTACATAAGAAGCATTTCTGCGGTGGTTTTTGG 9425 30 100.0 36 .............................. AGATCATCCAACACATCCGCCTCCGAGTCCAAAATG 9359 30 86.7 0 ....................A..CC.G... | ========== ====== ====== ====== ============================== ========================================= ================== 25 30 98.5 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CACCCCATCGGTTCACTTGCCTGCGGAGCGGCTCGCCAAACTCGCCTCCGTAGCGTCAGCGCCGCTGCAGCCAGTGAAAGAAGCGATGGCGAAAACGGAAAAAGCGGGATACCAAGAGGCGATCATCGGCCGACTGCTTCGAGACATAAAAAGTTAGCACTCGCCCTTGTTCATGCAAGTGTTGGGATTCCAATGTTTGTATTCGTCTTGCCTGCGATGGATGGGCAGGCGGCGCCCCGGTTTTATTCACCGCATGACGAGCGCTTGCCCTCGCTTAGGCAAACAGCAATCGGCAAACAAGGCACGCCAAACGCTAGGAAGCAGTCTTCGTTTGTCGTCGACCTCCAATGACGCAAAAACCCCAGGGGGTCGACGACATTGGTTTTGATCGCCTGATCCCTACAGCCATCAAGGGTAGACTTGATTGACAGAATCTTCGAAACGTGTTATGCTGAAGTTGCCGTTGCAGGAGAAAGCTTGTTATGGCAGCGCTTTTTGGG # Right flank : GTCAGCGCACTATTTTTGCGGAAAGATCCTTATCCCTCCACTTTCTATCTGTTTTTCTTTCCCTATCTTCCTCGAAAAATTTTGACCCACAATCGCTAGTTCAGCCCATTTTTTATGCGAAGTTTTCCAGAAGGCTGGTGAAAAACAGCAGTTTCCCTTGATCAATGGGTGAACGTGTGCAAAGAAGGAACGATGCTACAGTTTTTTCTATTATTTGAGAAACGTTATTGAGAAGCGGCCTACTCCCTTAAATCACCAGCCTTCCAAAATGTCTTTCCGCAGTAGAGGATTCACCGATTTGTTATGAATTAAGAAAATAATAAAATCACTTGCTTGAATTTTGGAAAATAGTTTAAAATTGGTATAGAAATAGATATATTTTCCTGGTTTGTTCATGCTAGATGGAGATTTGAAGAATAGGAGAGAGATTGGCTTGTATCAGCACATTGTATTGACATGCGGCGTTTCGTTATTGACGGGGGCTAGGAATGTCTTTTCGG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //