Array 1 857746-859791 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019962.1 Eubacterium limosum strain ATCC 8486 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 857746 30 100.0 36 .............................. TTTATCATTGGAGAGATTTACGCCCGCCTGTTCAAG 857812 30 100.0 35 .............................. ACCGGATAACTGTCCATGGCTCCGGCTTCATCGGC 857877 30 100.0 36 .............................. TCCTTAATCTTGCACGCGCGTACTTTTTCAATGTCC 857943 30 100.0 36 .............................. TCCCTTCTGGCCTTGGTGCACAGAACCGCAACAACA 858009 30 100.0 36 .............................. TCGGTGGATAAAATCAAAATGGTTACACGGGCTATC 858075 30 100.0 36 .............................. CGCTCTAAAATCCAGTTTTCTTGTTCTCTTATTTTT 858141 30 100.0 37 .............................. TTATTCCGAAAACCGCCCAGCTCATGGTGCATAAGCC 858208 30 100.0 36 .............................. CATTTTCGAGCGCAGTATTTGTCAAATCCAATTCCC 858274 30 100.0 36 .............................. TTTTCGATCCCGAAACGCGGGGCTTTTCCATTATTT 858340 30 100.0 34 .............................. GAATATGGCGAAACCGATTCAAAAACCCTTGCGT 858404 30 100.0 36 .............................. AAGATATGGCAGATATCCCAAGGGCGATTAGAGCAA 858470 30 100.0 35 .............................. CCGAAAAGATCGCCCCCTACAGCTATCAGATCCGT 858535 30 100.0 34 .............................. CGCTTAAAATGCTGGATGTTATAAATCCGTCTGC 858599 30 100.0 36 .............................. TGAATATTAAATACATTCCTGTGATTATCTGTGGGA 858665 30 100.0 35 .............................. GGCTTCAAGGGTTTCCAGATTATTTATTTGAAAAG 858730 30 100.0 34 .............................. AGAATTCCGTTGACCACGTCAATAAGTGCGTTTG 858794 30 100.0 34 .............................. TAACGCCCTTCGATCCGGTCAATATGGCCTTCTT 858858 30 100.0 36 .............................. CGAATTGATAGGGCCAGTACTCGCCGCCGTTTACTA 858924 30 100.0 35 .............................. GAAAGAGCACGGTACTGTGTCTGTACGCTCTGCGG 858989 30 100.0 36 .............................. ATATAAAGCATTCGTTTTTCAAAGTCCACACGATCC 859055 30 100.0 36 .............................. TGGCGAGTAAAGATAAGTACACCAAAGATTTCTTCC 859121 30 100.0 36 .............................. ATGTAAGCGCGGTTGAAGCCGTTGCGTCTCCAGATT 859187 30 100.0 36 .............................. GGCCATCTTTCATTCTGGCCATAAAAGAAAAAGCAA 859253 30 100.0 35 .............................. ACAGTTCTTGTCAGCCATTGGCGAGGATTTAGGGC 859318 30 100.0 35 .............................. TCAATTTTGAATAAGCGTTCAATGACCCTGCTTAA 859383 30 100.0 35 .............................. GCGGCTTTCTGAGCTGCGACTGCTGCGGCCCTGGC 859448 30 100.0 35 .............................. AGTTTAAATCCCTCCCTTACGCAGATGGCCTGCAT 859513 30 100.0 36 .............................. AAACCGTCAATGCGCCTTTTCTGTATACCGACTATA 859579 30 100.0 35 .............................. ACAGTTCTTGTCAGCCATTGGCGAGGATTTAGGGC 859644 30 100.0 36 .............................. CCAGCGGATACAATATCTCCGTCGTAACCTTCGTTT 859710 30 86.7 22 .........................G.CTG CGGTGTAAGGCACTATAGGAAA Deletion [859762] 859762 30 70.0 0 ........A...T.AA..C.A......TCA | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 98.6 35 GTTGAAGATTAACATGAGATGTATTTAAAT # Left flank : TTTATCCCCTTTAATATGGGAGAAAAGCTATGAGTGCAAATAAAAAATTTAATTATAATTATGCCTTCGTGTTTTATGATGTCAATGAAAAGCGTGTGGCTAAAATTTTTAAAATTTGTAAAAAATATCTTGTGCATTATCAGAAATCTGTATTCAGAGGAGACATAACCCCTTCAAAATTGATTGCCCTGAAAAACGAACTGAAAAAAATTATTGTTGAAGATGAAGACTTCGTCTGTATTGTAAAACTGCTGAATGGAAATGTCTTTGGAGAAGAAGTCATGGGCATCTCCGAATCCTCAGAAGACCTTTTTCTGTAGCCCTGTTTTACCAGGCGCCGAAAAGTTTAGAAGGCTAGAATCCTTTTAAACAAAAGGTTTGAGCGCCATTTGAAAGAAGAATTGACGAAAATCTCTGCGGCTGGTAAATTTGTAGAGAAATGGCTTGAAATCAAGGGTCTTAGAGAATATAAATAGAGGAAGAATAGCTTGATTGTTATG # Right flank : AACATAAAAATAAAAACCGCCAGCATATGCTGGCGGTATAAAAAGCTTTTATTCTTCCTCGCCATTCTCGAACAAAGTCTCCTCATGTTCGCCGTAGAGGCTGTCCAGCTCCTCATTAAGCAGCTGGTTTGCGAGGATAACTTCTTTAATTTTCTGGACCAGGCCAGAGGCTGTCAGCAGGCAGGCTGGGATGATGATAAACCAGAACATGTGAAACATACTGACTTCGCCGCCGGTAAAGAAGGTGTATATCAGTCCACCAAAGCATCCGAGCATGATGACAACAGTCACGATAAGGGTAGCGTTGAAGGACATATCCATGGTCAGGGCCACAAAAATGCACAGAACAAAAAGAATCAGGTAGTCCATAGCAATAAAACGTCCCGAGGACAGGGCAGTAAATACCCCCATGCCTAGCATGGCAATAACAAATAAAATCAGGCGCAAGGAAACGGCGGAATATTTAAAGGCGCCGAGGGAAACGGCATCAACGTTTTCGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1199731-1198713 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019962.1 Eubacterium limosum strain ATCC 8486 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1199730 30 96.7 35 G............................. GAAATGAAAAAGAGACAATAAAATGTTTAAAGCAA GCGG,C [1199718,1199725] 1199660 30 100.0 37 .............................. CTACAAAACTTGATGCAGATTTAGAGTATAAAAAAGC 1199593 30 100.0 36 .............................. CACTTGTGCGTAAAACCGTCAATATTGTCACCAACA 1199527 30 100.0 37 .............................. GCTCGTCCAATGCCTGTTTAACGGCTTCTGGTGACTT 1199460 30 100.0 34 .............................. TGCGTCAGCTCGACCGCCAGATCAGGGATAACGT 1199396 30 100.0 34 .............................. CTATGGATGAATTTTTAAACTATCTATTTGCTAT 1199332 30 100.0 36 .............................. TTGTCTAAGTCCGATACTTGTTACGTTTGCTGTTGC 1199266 30 100.0 36 .............................. AAGTTGTCCATTTTCAAAGGCATTCAAAACATCCAG 1199200 30 100.0 36 .............................. TCAACTTACCAAGCCCCTTGACTTTCCCATGGCTTT 1199134 30 100.0 36 .............................. TCGTCTTTTTATTTATCTTTTATATTATAATGATAG 1199068 30 100.0 34 .............................. AAGCCCGACAGGGTATAGCCTTCATCTTCTTTGC 1199004 30 100.0 34 .............................. CACGTTCGCCTTGCGGCCCGGTTTCCCCTTTCAG 1198940 30 100.0 36 .............................. AGCGTTCGATTGTAATGCTATGGGAGCCGTGGGTTA 1198874 30 100.0 36 .............................. CCAATTAATTTTGTCCATCAATCCTTACCTCCATTC 1198808 30 100.0 36 .............................. GATGACTAAAAAACAGCAGTTTATTAACAGGATTAA 1198742 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 16 30 99.8 36 ATTTAAATACATCTCATGTTAATCTTCAAC # Left flank : TCTGCCTGATTTCATCGAGATAAGCAGCCATATCCCTTGTGGGATCTGTGGCGTTCAGGCCAAATACCACTGGAAAATCACCCACCAACGGAATAAGCTCCCGAATACCAAACTCATAAACCATATCATTGCTGTTGGCATAGGGCAAAAGTCCGCCAAGAGAACCGCGTCCCATCCCGCGGAAAATGCCTGAGTTCAGCGCCAGAAGAAAATCAGCGCCGCCCTGAATCGCGTATTTTGCCGTCAGCCCCGTTCCAGACGCGACGGCAATCAAATGATTCTCTGCCTCAATTTCCCTTCTCAATTTCTCCAGAAAAACTTCCCTCGAAAGCATGCACTTCCCTCCTCATCTTTTTATCCATTATCCGATAATATACTTAAAACCAGCCCAAGCTACACCTCTGCTTCGTAAATTCCCTTTAGAACACTAACACTACAATAGCCAGTAAAACAATACTTAACATTCACAAAATACAGTTTGAAAAGCTCTGTATATTGTT # Right flank : CATAGCAATCGAGCCAATCTTAAATTAACGAATACCTTCCAATCCCTTTGGCTTAGCCATTTTTTGTCATTTTTACCAAGCCGTTAAGGTTTATGATATTTTCATCCCATTTTCTTTCCAAAGCCTTTACTTACGGTTCCTTTTACCCATCTGCACCAAAAGATGCCTGGGAAATTCTTAAATCTTTCTCATAATAAAATTATACGCGCAAAGCCCCCTGAGGGCAACTCCCTATGGACTTTTCTTGAAATGGTTTTTTTATAGTACACAAAAAATTGCAGATAACGCTTGCAAAAAGAAAAAAATGCCGTTATAATAAAAATCAAGTTAATATTTATGAATGATATGGTGCCCCGTAAGGGGAGAATAGGGAATCAGGTGAAAGTCCTGAGCGAACCCATCACTGTAAGCGGTAGTGACCGGCAAGTGCCACTGAAAGGGAAGGCGTCGGTTCATGTTAATCCGTAAGTCAGGAGACCTGCCTATGATTCTTAACGCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAATCTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //