Array 1 2655157-2651526 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070304.1 Glaciimonas sp. PAMC28666 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2655156 28 100.0 32 ............................ ACACTTTGCGAACACGATTGACAACAATTGGA 2655096 28 100.0 32 ............................ TGCAGATCGTCAAAGAAACCGATCCGGCAAGT 2655036 28 100.0 32 ............................ GCCAAGGGAACTCACGGAATCGGTTTTACGTT 2654976 28 100.0 32 ............................ AATCGATGGTTTACTTGATGGCGTTGCGACTT 2654916 28 100.0 32 ............................ TACTGTGTTGCCGTTGATGTCACGGACAATTC 2654856 28 100.0 32 ............................ ACTCAGCTCGTGGATGCCGACCATTAGCGTTG 2654796 28 100.0 32 ............................ TAAACAAGCGCGATGCTGAGCAGCCAGAATTA 2654736 28 100.0 32 ............................ TCAACACCGGGGCGGCCATCCATCTGCTTGCA 2654676 28 100.0 33 ............................ CGTGAAATTGCGGATTTAGTCGGGTCTCGGCAC 2654615 28 96.4 32 ............C............... TAAAGCACTGTGGCTGGAAGCACTCCGGTCAG 2654555 28 100.0 32 ............................ CAGAGAGTTAGATCTTATTTGGGTGGGATGGC 2654495 28 100.0 32 ............................ TTCGATCAATTCGCATAGCCCGCGCTGCGTCA 2654435 28 100.0 32 ............................ ATAAGCTCAAGGAGCTTTTCGGCTTGGATTTT 2654375 28 100.0 32 ............................ ATCGGCTGAAATAGATTAGACAGTTTCGGTTC 2654315 28 100.0 32 ............................ AGTAAGGGCCATCTCCCGTTGCATCGGATAAC 2654255 28 100.0 32 ............................ TCGGTAATATGGAGTAGGGCGCAGGTTGGTTA 2654195 28 100.0 32 ............................ ACTATCTTAGGATGACAGAAATGAGCCAAATC 2654135 28 100.0 32 ............................ TTAATGCTCGGCACAGACTGCGAATCGCCATC 2654075 28 100.0 32 ............................ ACGCCGATCACATGGAGATCATGAATCGCAAA 2654015 28 100.0 32 ............................ ATCATCAGATGCGCCGCCATCGCCGCTTGAGT 2653955 28 100.0 32 ............................ GAGGAGTCACCGCAGAACAGGCACAGACATTG 2653895 28 100.0 32 ............................ ACATCAAGGGCGACATCATCACCGATGCGAAA 2653835 28 100.0 32 ............................ TTGTCCTGTGAGTCGGGGTTGTAAATCTCATC 2653775 28 100.0 32 ............................ TGTAATAATACCGATTGAATCCGAAGTAGGCA 2653715 28 100.0 33 ............................ CATGTAGAGCGCTTGCGCACCACAAAAATGATT 2653654 28 100.0 32 ............................ GTTAAAATGTTTGGTTATATCGCAGCAGGGGT 2653594 28 100.0 33 ............................ CTATAAGACCAAACCCGCGAAAAACTCGCTAAC 2653533 28 100.0 32 ............................ TGTAAATAAATTGTCTTGGGACGCGTGCACAT 2653473 28 100.0 32 ............................ TTAACCCAGCGAAGAAGCAAGCATACTTGGTG 2653413 28 100.0 32 ............................ GACTAGCGGGGCTTGGGTCCAACAGTTACTGG 2653353 28 100.0 32 ............................ TGCAAAAAGATCCCGATGGCAGATATATGCTC 2653293 28 100.0 32 ............................ ACCCGAACTGGCTTAACGCCCATGGGATACCA 2653233 28 100.0 32 ............................ TTCTAGGCTATCTACGGCTCTACGCTTGCAGG 2653173 28 100.0 32 ............................ GCATTAATCGACACGTCCGGCTGATGCGTCGC 2653113 28 100.0 32 ............................ ATTGCAGCGCAGGTGGTGGCATGACCGCCGCA 2653053 28 100.0 32 ............................ AATTCCAATTGATGTTTAGCAAACTCGCCAGC 2652993 28 100.0 32 ............................ ATCAAGGAAATGCAAGCACTGACTGCTGATGA 2652933 28 100.0 32 ............................ TCGCAAGTGTTGCCAAGGTACTTGTATAAATC 2652873 28 100.0 32 ............................ GCGATTAAATATGATTCTGAAGATGTTGAAGA 2652813 28 100.0 32 ............................ TTCCATTTAGCCATCACAGCGGCTAGCTCGTC 2652753 28 100.0 32 ............................ TGTGCAAGTTTAGGTGTCAGGTAAGCCCGCAA 2652693 28 100.0 32 ............................ ATCTTTGAAACATGGGCCGCAGCACAGCAGTC 2652633 28 100.0 32 ............................ ACTCTATGACCATGCTCGAAATACGCGCCAAG 2652573 28 100.0 32 ............................ ATGACCGACGCCCCTCTATACATCGGACTATT 2652513 28 100.0 32 ............................ AAGCCACCGGATTGCGTTTGCAACTGTGAAAA 2652453 28 100.0 32 ............................ GTGTACAAAAACGCTTTTTCGACTGGTTGTCC 2652393 28 100.0 32 ............................ CCGTAGATAAGCCCTACGCGGGGGGTTAACTC 2652333 28 100.0 32 ............................ TCTTTCGGTGTCAGCGTTGCTTGCAAATCCCT 2652273 28 100.0 32 ............................ AAAACCGCGCACGGTCTTTGGTTTATTTGCTT 2652213 28 96.4 32 .C.......................... AGAGGCGGTAAAGGGTTATATTGATTATGAAT 2652153 28 100.0 32 ............................ TCATACGTTCCTGGCGTCATATCAGCGCGGTA 2652093 28 100.0 32 ............................ AGTGTGCGACAAAGCCGCTTTGTTTATGAAAA 2652033 28 100.0 32 ............................ TTTAGTACGATTATTGCTTACGAATGTAAACA 2651973 28 100.0 32 ............................ ATGAGTAAAGTTTACAAAACGAGTAAGAATTT 2651913 28 100.0 32 ............................ AAATCCAACCGTCGCGTTCTATCCATCGTAGC 2651853 28 100.0 32 ............................ ATTAGCGTGCCAGCGACGACGGCCATAAAGCA 2651793 28 96.4 32 ....................T....... ACACCCGAACCGGTCGCTGAAATCGCACTGCC 2651733 28 100.0 32 ............................ TTGATCGGCTGAGCCGCCACTTACAGGACAAA 2651673 28 100.0 32 ............................ GTATCCTGCACCTGGCAACGACGCCCATATTT 2651613 28 100.0 32 ............................ GTGGTGAAAAGTCGGTGTCGGGCATGAATAGA 2651553 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 61 28 99.8 32 GTCAGCCGCCATGCGCGCGGCTTAGAAG # Left flank : GGTCACGGATGCTTTACGCCAGACTGCGCTCTGCCTTCGAAGCTAATGGATTTAAACGCGAAAGTGGAAAGCGAGGAAAGGGATCGCCCGAAGAGAGAATTAATTCTTTCCTTGATCATGGAAATTATATTGCCTATGGATACGCTGCCGTGGCGATTTATGCCTTAGGCATTTCATTTGCGTTACCGGTATTGCACGGAAAAACTAGACGCGGGGCACTAGTTTTTGACGTTGCTGACCTTTTCAAAGATGCGATTGTTATGCCCTTGGCCTTCGAGATGGGTTCTGGTAACGCGACAGACCAAGAGTTTCGTAATGAATTAATAGATCAATGCCTGCAAGCCGAAGTCATCGATACCCTGATCGAAAACATCAAATCTTGTATCATCGAAAATATTCATAAAAATCAAATAGTTACGGAAAAATAGAAATAGTCATGTATTTTTCTTAGCTTTCGTCCAACTCCTTGTTTTAATTAAAATATTTTGTTTTTTAGAACG # Right flank : AGTCCGGGAGATCAACCGTCTGACCAGGGGGTTGAACCACAAACCGACGAAATTTCCGTCACTCAAAATCTAGGCCAGCAAGTAGAGCATCTAGGTCTATCGTTTTGCCCTGGTCATCGAATGTGTAATGCCCACCCAGTAGCAAATGCCGCCATGCCACCGGCGAGGTGGACATGATGAAAGCCCAAGCCTTGGGCTTGTCTTTGAAGCGCTCCAGTAACCGCGACAGGATAGCTGCGTTGTAATAGATGACGGCGTTGGCCACCAGACGCCCACACTGATTACTGATTTCGATATCGACGTCCGTCTGTCCTGTCAGCTCCTTCTTGCCGCCAACTTGGGCAATGGCCGCACGCAACTGGTGGTAGGACTCAAGGCGGTTTTGTGAACGGTGCACATTGCGTTGCAACTGCGGGTCACGCAAGTAGCGCAACGTGTAAATGCTGCGGATGAGCTTGTCGTACTCAAAGACCGCCCGTCGCGTGGGATTTGACGTGCTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGCCGCCATGCGCGCGGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.60,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //