Array 1 11811-12104 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIZS01000102.1 Geobacillus thermodenitrificans strain OS27 NODE_26_length_45528_cov_263.749_ID_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11811 30 100.0 37 .............................. TTCCTAATGGTGAGGATGCATTGGATGAGTTGCTTCA 11878 30 100.0 36 .............................. GAAAACGGAGCGGGAGGGATTCGAACCCTCGCGCGC 11944 30 100.0 35 .............................. AGACCTAAACCTTGCACATCATTTTCAAAGCCTTC 12009 30 100.0 36 .............................. GATGCAGAGGAACCGAAGTTATAACTGTCGGAATTT 12075 30 93.3 0 .....................A..G..... | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 98.7 36 GTTTGTATCGTACCTATGAGGGATTGAAAC # Left flank : GAGACGATCGATAGAAGAAAGAAAACTCATTTTTTCGGGCCGAATGATGAGGTATTTCCCCATCTCATTGAGCTGAATTTTCGCCATAAATATCAAGCGTACTATGGTGTCCCGCCGGTGGAGAGATTGTCAATTCAACCCGTTCATGTCCACCAACGCCATCGCGTTGTGACACTATTCAAAGATATGTATATTACAGGGTGGTTGGGGCATTACCGTCTCTCCTCTTCTCCCGAGCAGTTGACGTTTTTATACCACGTTGGCCTGGGAAGCCGAAATTCCCAAGGGTTCGGCATGTTCTGCCTAACGGGTAAGTAATTCGATTCCTCTATTGTCGTCGACCTCCAATCGTGCAAAAACCCCAGGGGGTCGACGACATTTGTTTTTGTCACTTGGCTCCTACAGCTATCACGGGTGAGCGTGATTGACAGAATTTTTTGACCGTGTTATTCTGAAGGTAACATAGGATGAAAAAACTTGATATAACAGCACTTTTTGGG # Right flank : CTTTATCGATTTTGGAGATGGAGCATATCATGTCATCATCAATTTATAAAAGCACTCTTGCTGTGGTTTTTTATTTTGCGAAAACATCAAATGAAACTTTCGTGGAGAGTGGAATGAAAGAAAGAATTTTATGTTAAAGGATGATGATGTATGAATAATAGAATACAACAATTCTGGAATGATTTTTGTAAGGCAACTGGTCCGGAGGGGATTGAATATAAAGATGCCTTTCAGTTTGGAGCTTTTCCTGATCGGTTGGCCGATTTAGTTGTTAAAGGAAAGAAAACAGCGACAACTTCAGGCTACGTGTTTTATGAGTTAGAAAAAGAACCTATCCCTAAAGCTGGTGAATATTATATTGTTTTGGATGGTCAGGAAGAGCCAGTCGCAGTCATTCAAATTCAATCCGTTGAAATTGTTCCGATGAATGAGGTGACAGAGGAATTTGCTTTAGCGGAAGGCGAAGGAGATTATCGTTCTTGGTGGGATGCACACGAAAA # Questionable array : NO Score: 9.00 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 40951-42377 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIZS01000102.1 Geobacillus thermodenitrificans strain OS27 NODE_26_length_45528_cov_263.749_ID_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 40951 30 100.0 36 .............................. TGTGGAATAAAAAACACTACCGTCGCGTTCATTTGC 41017 30 100.0 35 .............................. CCTTGCCGACTTGAAAATGTCGGAGTTTCACGTTT 41082 30 100.0 38 .............................. ACGATCCGCGATTTTCTCAAAAATTGGAAATTTTCTGA 41150 30 100.0 36 .............................. TAATGAGAATTAGAAAGCGGCAAGCAGAAAATGATG 41216 30 100.0 37 .............................. TGAAGTGAATGCGGTATGGATTCCGCGGTATGGCGCC 41283 30 100.0 36 .............................. CCCATTAATCACAAATCTGTTCCAACCGGGCGCTAA 41349 30 100.0 35 .............................. CAATCCCCGAAAGGCGAACCCGCTGGGCAAAAAAC 41414 30 100.0 41 .............................. CGACACTTTTTTTCCGGTAATCGATGAACTGGACTTGCCAA 41485 30 100.0 35 .............................. TAAACAGATCGGTGCGAACACCGATTTTCAATTTC 41550 30 100.0 39 .............................. TATTCCGCCAGTGACCCCGTAGGGAATGACGATGCGCGA 41619 30 100.0 35 .............................. TGAAAGCAATTGGTAACGTCAAAGACCGTGGCAAG 41684 30 100.0 34 .............................. GTTGCTTGATTGTTCATTGCGACATTACCTCCAT 41748 30 100.0 37 .............................. ATAACAGCAGGATTAGCAGCGTTTAGTTTTTTAGCCA 41815 30 100.0 35 .............................. ATGCGGGCGTCGAACAGGCGGCAAACGTTGTTTTT 41880 30 100.0 36 .............................. GCGCCCTCCATTCGTTCACAATCTCGTCTTGCCATT 41946 30 100.0 38 .............................. CATGTAAAACAGCCTGTTTTGCTTCATTTTGACGTTGG 42014 30 100.0 37 .............................. CCCGTCATGATGATGTTCCCATGTTCATCCTGGAAAG 42081 30 100.0 39 .............................. ACTCCAATGATTTTTTCGCCGTCTTCAAATGGCGATTGG 42150 30 100.0 35 .............................. TCGGATATGCGCTTAATTTAGCTAATGCTTCTTTA 42215 30 100.0 36 .............................. GGGAACTGATCGAATCTTTAGTTGAGTTTCAAAAGG 42281 30 96.7 37 .....................A........ ATCCGAGCCACACGAATTTCGATGTTATGGCCGGCTT 42348 30 93.3 0 ....T............A............ | ========== ====== ====== ====== ============================== ========================================= ================== 22 30 99.5 37 GTTTGTATCGTACCTATGAGGGATTGAAAC # Left flank : AACCAACAACGGGACTTGACGAGGCGAGGCAGCGGCGGTTGTTCGGACTGTTCGAGACGTATTTGTGATTATTTGAGGAAGAGGAGCGCCAATTACGAAACGAGGTGAACCAATGGAGACAAAGGAAGCGAAACAAGGAATGGAGTGAATCACCTCGTACGAGCAGCAAGGAATCGAGAAAGGAAAGGTGGACACCGCGAAACGGATGGTGGCGAAATGATGCGACGTGACGGCGATGGGTGAGCTGCTCGGATTGCTGATGGAAGTAGTGGAAAACAGCAAAAGGAAAAGGCTCATGTGAGGGCTCGAGAAAGCAAGAAGCGAACTTCGTTTGTCGTCGACCTCCAATCGTGCAAAAATCCCAGGGGGTCGACGACACTTATTTTTGTTGCTGATTCCCTACAGCCATCATGGACGAACATGATTGACGGAATTTTTCGACCGTGTTATTCTGAAGGTAACATGGGATGAAAAAGCTTGATATAACAGCACTTTTTGGG # Right flank : CGATACTGTAAGAGTATACAGTTTATCGCCATGCATTGATTGACGAAGTGGTGGCGGAAATCCGTCGGCTAAACGAAGAAAACTTCCGCGTACGCCAACATATCCCATATGTACACAAGTTCCAAAACCGGGAAGCATGGAGCTGTTTAACGGCGATGGATGTCAATGAAATCAAAGAACATCTTGCACCGCTCATTGTTCCGCTCAACGATGATGAACTGGCCAAGCGCTTTGATTTGCTGATGTATACAGTTGAGTTGGCGAAGTTGCAAACAAAAAATGCGACGAAGCCAATTCGGAGCATGATTCGCACCACAGAAGCGTTATCTAAGCTCGGATCGATTCCGCAAGTGCAGGAACAAAAATGCATCATCGAAAAGGTGTAGACGGAAGAGTTTTGGAGCGAAGCCGATAGTTTTGAATTGGAAGCTGTTCGCGAAGCGTTGCGCGATTTAGTGAAATTCCTTGAAAAAGAAACACAAAAATTTTACTATACGAAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //