Array 1 5068698-5071347 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023249.1 Klebsiella pneumoniae strain CCUG 70742 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5068698 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 5068759 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 5068820 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 5068881 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 5068943 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 5069004 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 5069065 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 5069126 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 5069187 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 5069248 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 5069309 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 5069370 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 5069431 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 5069492 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 5069553 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 5069614 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 5069675 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 5069736 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 5069797 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 5069858 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 5069919 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 5069980 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 5070041 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 5070102 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 5070163 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 5070224 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 5070285 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 5070346 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 5070407 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 5070468 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 5070529 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 5070590 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 5070651 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 5070712 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 5070773 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 5070834 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 5070895 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 5070956 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 5071017 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 5071078 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 5071139 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 5071200 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 5071261 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 5071319 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //