Array 1 151196-148477 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJUL01000004.1 Halomonas venusta strain NBRC 102221 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 151195 28 100.0 32 ............................ GTCCAGTAGCTGGTCGGCAAACGAGTCGAAGC 151135 28 100.0 32 ............................ AGAAGAAGAAACGCCCGCCCCTAAGCAGAAGC 151075 28 100.0 32 ............................ CAATCACGGCAGCGGGAAGAGGAAAGCAAGGT 151015 28 100.0 32 ............................ TGGTGCTAGTGATTAAATCATTGGGGGCAGTT 150955 28 100.0 32 ............................ TCCAACGATTGCTACAGCACCGTTATTGGCTT 150895 28 100.0 32 ............................ AAAGGGAAATCACTGGCCTGGTGCTAACTATG 150835 28 100.0 32 ............................ TTTGGGCTATAGCCACGAGGACGGCAGCACAA 150775 28 100.0 32 ............................ AAAGATTGCTCAACGAGCAATCAAAGCAAAAA 150715 28 100.0 32 ............................ ATCAAGACCGGAGAACTCTAAATAAAAGTAAC 150655 28 100.0 32 ............................ AACCGCGTGCGCGGGTTCAACGAACTGTTCTC 150595 28 100.0 32 ............................ ACAACCAAGCCGACGAGCTGGCGAACCTGCTA 150535 28 100.0 32 ............................ TTGGCCCATTTTGGGGAGTGACTGGCTTTCGT 150475 28 100.0 32 ............................ AGTTTCGCCATGAAACCAGCCGAGAGCAAGAC 150415 28 100.0 32 ............................ TGCTGCTCGGTCTTGTTATTCGATAGCACCTG 150355 28 100.0 32 ............................ AGTGGCAAGAAAGTAAGCTTTACGGTGTGTTT 150295 28 100.0 32 ............................ TCCGCGCCCAGGCCCTCCAACGCAAGATGGAA 150235 28 100.0 32 ............................ CGTGGAAACGAAATCGTCCTGCCCAGCGTGAA 150175 28 100.0 32 ............................ TTGCCGACGCCAACGACCGCTTCTTTCGTCTG 150115 28 100.0 33 ............................ GCGATCGTTTTATGGACAAAGTACGGACTCAAA 150054 28 100.0 32 ............................ AGAAGTGATTTATCGAGCCAACCCGCTACCTT 149994 28 100.0 33 ............................ CTTTCATGTGATGGCCGTCATGCTCACTGCTAA 149933 28 100.0 32 ............................ ATGCCGGGTGATCATGCACCCGGCCGCAGGTA 149873 28 100.0 32 ............................ TCGACCCAATCCCCCCAAATACGTTCTCCTTC 149813 28 100.0 32 ............................ TGGCTGATGGGTAGTGAGCGCACCATGAAAGC 149753 28 100.0 32 ............................ TCATCTAGCAGCGCGGACTGATCAACCATCTC 149693 28 100.0 32 ............................ TGCAGCCGCTCAACGCGAACCTTGGTAATTTC 149633 28 100.0 32 ............................ CTGCGCAAGTTTTGGCAAATGGCCCGCTTCAC 149573 28 100.0 32 ............................ TTCGGCGCGGTGGTTTTACGTGTTGCCATGTG 149513 28 100.0 32 ............................ AAGAGATGACTGCCGCCGATCGCAAGCGGATG 149453 28 100.0 32 ............................ ACGTTGGAAGCATCCAGCATGCCGATCTCTCT 149393 28 100.0 32 ............................ AGCACCAGGCGCTTCCATTCGTTGCCGAAGAT 149333 28 100.0 32 ............................ GCTGAAATCCCAGTCAACGACTCTGAATTCGC 149273 28 96.4 21 ...........................G TGAGATTGCTAGTCCTAGTAT Deletion [149225] 149224 28 100.0 32 ............................ TGCATAGTCCATTTCGCACAGCACAACCCTGG 149164 28 100.0 32 ............................ AGCGAGCAATACAGGTAATGCGCGGCTTGCTC 149104 28 100.0 32 ............................ AGCACGTACTCCAGGTCGTCGATGCTCAGTTT 149044 28 100.0 32 ............................ TGCCCGATGATCGCCGCCGTAAACAGGAAGGC 148984 28 96.4 32 ............T............... AGAACCACCTAGCGCTGGATGAAGAACTAGAA 148924 28 96.4 32 ............T............... TGCTCTTCAAGATAGTCGTGTCTGTCGTACAC 148864 28 96.4 32 ............T............... ATTTTCCATTATTAGACCAAGAGAAAACACAA 148804 28 96.4 32 ............T............... TTACACGCCCAAGCGGCGGCTTTCACCTCACG 148744 28 96.4 32 ............T............... AGTGACTGGTTTCAAGAGCGGTGGCCTACCCC 148684 28 100.0 32 ............................ TAGGTACACCACGAGATGGGATGAATTACCCG 148624 28 100.0 32 ............................ GTGGTCGCTGGGGGCGCGGTGTCGTTCGGAAA 148564 28 100.0 32 ............................ TCTAATGTTAGATTTGATTTAACCGGGCCAGA 148504 28 78.6 0 ..................C...TT.GTG | ========== ====== ====== ====== ============================ ================================= ================== 46 28 99.1 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGGCTGAAGCAACTGATGGGCGCTGACTGGCTAACCGGTATGCGCGACCACACGCAAGTCAGTGAGCTGCTTGCCGTGCCTGAAGGAGCGAAGCATATCAACGTGGCGCGCAAGCAGTTCAATACGGGCAGCCCAAGCCGCGCAAAACGCTATGCTAAACGGCATAACATCACAGAAGATGAGGCACGGCAGATCTATGCCAAGTTGGCTGAACGACGTATAGAGCTTCCCTTTGTGCAGATTAATAGCCGTTCTACCCAGCAGCGATTCAGCCTGTTTATAGAACACGGCAAGCCTCATGAAAACGCAGTAGCGGGTGCCTTTAACCACTATGGTTTAAGCAGTAACGCTACCGTGCCGTGGTTTTAACCCTTTTTTCTAACGTGAAAATTGGCAACCAATAATCAACCACTTAGCGGTGTCGCTCAAAAAAGGGTGATACCGCTTTTTTTGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : CTACCTGAAACTGGTATCGCTGTGCAGCGTTTTCGCGGGTGCGCTAACGCTTACGCCGCGCTACTCGAAATGTGCATTACCTTCATTAATTCGTAGGTTAGATGTTGCCGCCCAGACAGTTCAGTGTTTAGTCGGTGTGAATGCTCTCTCAGTTTCGGCGTCATCATCACAATGGTGCTTTAATTGTTAAATATGGTGAGGAAGAGAGTGTTCAAAAATAAAACTGCTTTAACATAATGATTGGGGTGTGTTTCGGTAACTGCCATCTAGAGGATATTACGTCGTGGAAAACTTTCTTGAGCAATTTGGAGCTTACGTTCCTTTGATTATCAATGCCGTGAAAGCATTGTTGGTATTGATTGTGGGCTGGATGGCTGCTGGGATCGTCAGCAGCTTAGTGCGTAAGCGGGTGAATGCGATACCGCGTATCGACCCTACTCTGGGCAATTTCCTTGCAGCCTTGGTGAAGTGGGGCATTCTACTGGTTGTATTTATTACGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //