Array 1 539640-542105 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEDYU010000015.1 Klebsiella pneumoniae strain ONE214 SQ99_1_cotig_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 539640 29 100.0 32 ............................. TCGCGCGTTGGGGCGCTGACGCGTATCGACGA 539701 29 100.0 32 ............................. ATGACTGGGCCTTATAATCACGGAAATAATCC 539762 29 100.0 32 ............................. AAAACGCGACAATCGCAATCAACAGTTATTTT 539823 29 100.0 32 ............................. ATCCCGCCGCAAAAATTACACGGAGAAATAAC 539884 29 100.0 32 ............................. AACATCCTCGACTGACACAGGGCATCGCTCTT 539945 29 100.0 32 ............................. AGTAAAGGGAAGCTGAGTCATGACAATCAGTC 540006 29 100.0 32 ............................. CGTGTCGGTCATGGCGATGCTGGGCGGCGATA 540067 29 100.0 32 ............................. CGCCTGGGGGGATCGCGGTGAGTGATTCATTT 540128 29 100.0 32 ............................. CGCCTCAACAAATGCGACTTCATAGCCTGCTG 540189 29 100.0 32 ............................. GCTCGGTGTGGCCTAAATCAATTCGCGGATCC 540250 29 96.6 32 ............................C CTTGCATACGTGTTACCCTCCATAACCTCACA 540311 29 100.0 32 ............................. CGTCGCCTGGCCGTCTGGTAAGTCCGGTTTTA 540372 29 100.0 32 ............................. CAGATATCGGCACCGCGAGGTTCTGAGTCGTA 540433 29 100.0 32 ............................. AGATCGAATAGTCGTAGTTTGTTTTACGGCAG 540494 29 100.0 32 ............................. CTGGAACGGACCCTGAGCGCCTTTGGGGGAAA 540555 29 100.0 32 ............................. ATTTCTCCGGTTGCCCCGGGTTCCCGGGGCAT 540616 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 540677 29 100.0 32 ............................. TGCAGACGCGGCACTTTTACCCACGCTTGAGC 540738 29 100.0 32 ............................. ATATTCCGAGCGTTGCCAGCCTGCTGCGCAAT 540799 29 100.0 32 ............................. GCGGCGGCGTTAGAGCGCGCGCCAGCGTTTTC 540860 29 100.0 32 ............................. ACGGCATCTGCGAAATTCATGTTGCTAAATAC 540921 29 100.0 32 ............................. GCTGCGTATAAAGGCTGCAGACCGGAGAGAGG 540982 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 541043 29 100.0 32 ............................. CGTTATTTTAAAAGCTGACGGCGAAGTGGTGG 541104 29 96.6 32 ............................A GCGCACCCGAACCATTACGGGGCTTGCCATTC 541165 29 100.0 32 ............................. GCCGAGTTCGTCAATGCTATGAATTTTATAAC 541226 29 100.0 32 ............................. CCGGACAACGCGGTCAGTACAGATTTCATTGG 541287 29 100.0 32 ............................. TTTTTTTACTTCCGCTGGCGAAGCGGGCGAAA 541348 29 100.0 32 ............................. AGTGGCGTTAAAAATGTCGCGGGTAATTTGTT 541409 29 100.0 32 ............................. GGCAGCGAGGCGCAGATCCCGCAGCTTTACCA 541470 29 100.0 32 ............................. TTCGGCCAATAACCGACTATGTGAGGGACTTT 541531 29 100.0 32 ............................. CCCGATAAATTCACTCTGTGTCATACGGTGAT 541592 29 100.0 32 ............................. ATCTGATCAGCGAATACATGAAGAACAACCCA 541653 29 96.6 32 ......T...................... GTTTGATCGGCGTCAGGACAATATCCGCGGGC 541714 29 100.0 32 ............................. TGATCCACGTAAGCAAGCAAAGTGATCCGCCA 541775 29 100.0 32 ............................. AGGAACCGTTCCGGCAGATAGCTCTTACGCTC 541836 29 100.0 32 ............................. GCATCGACGCCCGTATCGTTATCGACAAAATA 541897 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 541958 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 542019 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 542077 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //