Array 1 1306219-1308070 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT629939.1 Phocea massiliensis strain Marseille-P2769T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1306219 33 100.0 34 ................................. AAGATTTGGTGAAGATTTGGACGAGGGCGAACTT 1306286 33 100.0 34 ................................. CAAATATTGCTTCAGCAGCAGCCATCATTACCAT 1306353 33 100.0 35 ................................. CCCCACCGAGGCGTATTTTGCCAAAGGCTGCTATG 1306421 33 100.0 33 ................................. GAAGGGGAATTCCAGCGGGCCAAGGCCCGGGGG 1306487 33 100.0 33 ................................. CGATTCGTGCGATGATTTTTGAAGGATAATATC 1306553 33 100.0 32 ................................. AGCTGGGCGCCCGCACCTATGTCCAAGCAACT 1306618 33 100.0 35 ................................. AGATAGTACACCCGCTTCTGGATGGACTAATAATT 1306686 33 100.0 34 ................................. TGGTTTGTTGAAATGAAGAAGGTCATCAAACTGA 1306753 33 100.0 33 ................................. AATAAGGACAGTGGGACGATTTGGTGTTTACTG 1306819 33 100.0 36 ................................. TACCCGAAGCCAGTGCTCATCCTCCCCCAGCTTCTG 1306888 33 100.0 33 ................................. CCATTATTATTTTACCACAAAACAATGCCTAAA 1306954 33 100.0 35 ................................. CCTGGCCGCCAGCCCTGGGGAGGGCCTTGCCCTCA 1307022 33 100.0 34 ................................. TATCCAACTAAAATCCAGTCATCTGCCACCAAGT 1307089 33 100.0 35 ................................. TCTCAATGACTTGGCCATCAACGAGTCGGTCACTT 1307157 33 100.0 34 ................................. CCCGCTGTCCCAGTAGTAGTGGAGGACGCCGGTT 1307224 33 100.0 36 ................................. CTGCGAAAGGTTTTTCTCGCTCTCAATCCAGCCCCC 1307293 33 100.0 36 ................................. TCCGCAGCATTTTGGCCTGGGAGTGGTACGACGACC 1307362 33 100.0 35 ................................. GCTGGCAGGATGGGATAGATAAGAAGGTGAACATC 1307430 33 100.0 34 ................................. ACGACGGTATTCTTATCCTCCACATCCACATGTC 1307497 33 100.0 36 ................................. CAATTCATAGGCTTCTTGGCCAGTACTCTGCCACCG 1307566 33 100.0 35 ................................. AACCTGGACTATGATCTGGTGGCCGCCTTGGACCG 1307634 33 100.0 35 ................................. TTCCACCTACTCAGATGACCAGCAGGGTGCAACGG 1307702 33 100.0 35 ................................. ACCGAGGCCATCGCCTTAATGCGCCGGCAGAAAAA 1307770 33 100.0 35 ................................. ATCTCGGTGCTGGACATGCCAAAGACCTGGTTTAG 1307838 33 100.0 34 ................................. ATCCAATGTCCCGGTATTACATTCTGCCAGATAC 1307905 33 100.0 33 ................................. TTGATTGGGAACAAGGAATTAACCGCGATCTTA 1307971 33 100.0 34 ................................. AGCTCAAAGGACCAGTTGAGGCCGTACCAGATGA 1308038 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 28 33 100.0 34 GTCGCCCTCCGTGAGGAGGGCGTGGATTGAAAT # Left flank : GAGCAGCAAAGGGACAGATGTGGACCGGATACAGCTGTGCGCCCAAGCAATGGCTTTAGAGGAGATGTTGGTCTGTGGAATCACCCATGGCTATCTTTACTATGGGGAAACCCGCCGCAGGGAGCAGGTGGAGTTTACCTTGGAACTGCGCAACCAAGTGGAGTCGCTGGCCAAGGAGATGCAAGGATATGCACAGCGGGGATACACCCCCAAAGGGAGGTTGCAAAAGCATTGCAATGCCTGTTCTTTAAAAGACGTCTGTCTCCCCCAGCTGTCCCGAAGCCCCTCTGTTAGGGAGTATATCGAACAAAGGATGGAAGAACTTGTGTGATGTGCGAATCGGAAGCGGTCAGAGAACTCCTGAAGGGTTCGCACCAAATTGATGGAAAAAAGGAGGACACAAAGCGGAATTTTTTGGATTATATTCCATAAAAAGTAAAATCATACAAATGCAGCATATAAATGCTAAAATTAATAGAAATGTTTTGTGCAAAATTGCT # Right flank : TATAAAAGAGAAGCTGGGCATTCAGTATTACGGGCGTCGCCTTCCGCGAGGAGGCAGTGTGGACGCTGCCTAGAAATCCGATTGGAAAGGGGAAGTTATGAAACACCTGCTCAATACCTTATATGTTTTGTCAGAGGATAGTTACCTTTCCCTCAATGGGGAGAACGTAGTGGTCTCCCAGGGGGAAAATCAATTGGGGCGGTTCCCCCTGCACACTTTAGAGAATATCCTTTGCTTCAGTTACAAAGGGGCAAGCCCTGCCCTGTTAGGTGCTTGTGTCAAACGGGGTATACATTTCTGCTTTTTTACCCCCAATGGACGGTTTTTAGCCCGGGTTTGCGGAGAGACATCGGGCAGTGTTCTCCTTCGCCAACAGCAATCCATCGCGTCTATGGACCCAGTGCAGACAGTGCGGTTTGCAAAAAATCTGCTGATGGGAAAAGTATACAATTCCAGATGGGTCTTAGAACGAGCGACAAGGGATCACCCCCAGCGGGTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGAGGAGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //