Array 1 70678-72167 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKYC010000020.1 Klebsiella pneumoniae strain IR5724 Scaffold20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70678 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 70739 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 70800 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 70861 29 100.0 32 ............................. TTATTTCTAAACTAAGTTTTGTTTCATGCAGT 70922 29 100.0 32 ............................. TTTTTTTGACGAAGACGGCAACGAGTTAGAAG 70983 29 100.0 32 ............................. GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA 71044 29 100.0 32 ............................. CTGACAGCTGGCGCTAACCCGTCGTTTATCGC 71105 29 100.0 32 ............................. CGTGAGCATCTGGGCATCTTCAGTGATAGCGT 71166 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 71227 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 71288 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 71349 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 71410 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 71471 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 71532 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 71593 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 71654 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 71715 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 71776 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 71837 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 71898 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 71959 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 72020 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 72081 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 72139 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //