Array 1 3218-2785 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUFO01000016.1 Paenibacillus massiliensis subsp. panacisoli DSM 21345 K331DRAFT_scaffold00012.12_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3217 32 100.0 35 ................................ AGGCATCCAATATCCTGTTTGTCCTGCCTCAGCTA 3150 32 93.8 36 ........................G......C AAATCTCATCATACACCTTTATAGTTGTTTTTCGCT 3082 32 100.0 35 ................................ AGGCATCCAATATCCTGTTTGTCCTGCCCACGCAA 3015 32 100.0 36 ................................ ACATTCCCGATAACTGTGTAATGCACAAGCACAGCG 2947 32 100.0 36 ................................ AAATTCAGCGGAACAAAAATTGTCACTCCGCAGAAA 2879 32 93.8 31 ........................G......C AAATCTCACCGAACTTAGTACGCGTGTCGAA 2816 32 68.8 0 ............AC.GA...A.....ATTTT. | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 93.8 35 GTCGCACTCTACTTGAGTGCGTGGATTGAAAT # Left flank : GTGCATGGAGTCGCTAACGGGCTCGGTATTCGAGCATGGTGAACTGCGTGCATGTTATTCGGGCAGAGGCTTCGACTCGTAATTCGTGCATGATGAAGCTGCCGGCATGGTTTTGCGCGTCGTGACGCTACGGGCTCGGAGGTTTCCTTCGATCGCTGTTAAAACCTGATTTATTCATTAGATAAAAGAGTTAGCGGTGTAAATAAGGTTTTAAAGGCGAACACTTCGTTTCTCCAGAATTCCTCCGACCCTCCGCTACTGCCCTTGCTGATGCTGTAAAATGCAATAGCTATACTGCATAATTGCCAGCTAACCTTTGGTGCGAATGCCAAGCTCACATGATTTCCCCGGGGGATTAGCACCTCAGATTTTGTCGAATCCATGTCGAATGTGAATGAAATGTGAACACACATCTGAGAAAGCAGCACTTATCCTTTATATTTTCACGCTTAAACGTTAGAATTAGGAGTACTAACAACTTGGTTAAGTTGTTTTTCGCT # Right flank : CTACTGAATAATAGGACATCCTTCAATCAACTACCGAATCATGTTGAAACCACGCTAAGACAAGGGCTTGTAATTGCCCCTTGGCGTGGTTTCACTCATTATAATAATTAAGTTTGATATATTCGGCTTATTGATAAATTCGAGGCTTTGTTTGTTCTTCAATTAATTTTTGGATACAGATAGCTAGATCAAAAACAAACTATGCAACAGTGATTCATTTTTGAAACAATCCATAGATCATCAACGCAATTATGAGAATATAAAGAATCCATAGCATGATCGGAGCCTTTGAAACCAAACTTCTCAAGGCTATAATTAAGAATTCACTGAGCTTAACACAAGATAAAAAGATAATGAAGATTGTGAATTGAGAAAAAAATGAACGGCCTCCATATAAGTTCTCAACTAGAAACGTTAGCTGATTAGGTGTAAAAATCAAAAAGTATGATGCTATACACAACACGAAAAAAAAGTGATATCTATCACGAACTATTTTCCTA # Questionable array : NO Score: 8.95 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACTTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTACTTGAGTGCGTGGGTTGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.61%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 671401-671080 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUFO01000001.1 Paenibacillus massiliensis subsp. panacisoli DSM 21345 K331DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================================== ================== 671400 32 100.0 36 ................................ AGAATTTGGCTATGAGTGTTGGGAGCTGGATGCGTT 671332 32 100.0 35 ................................ AGTGGTGGTACTAAGCTTAAGGTGGAAGTCACCGG 671265 32 100.0 56 ................................ TCTCGAAGAGCTGCGATCCGGAATGTTTGGTTTGCGATCCGGAATGTTTGGTTCAT 671177 32 96.9 35 ..............................G. AACTTACCAGCCAGTATTGGTGAATCTGAACGATA 671110 31 90.6 0 ........T...............-..C.... | ========== ====== ====== ====== ================================ ======================================================== ================== 5 32 97.5 41 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TATAATGTAGCCTTTAATTGATTCGACCAAAAGTATTCCACGCTCCTACATCGTTTCCGTCTTATATTGGGACGTTATCAACATCTTACTTCCTTTGAACAATTCGGTCTACTACAGAATAGCCTGCCTGCCCATCGTCTCTATACGTACCCTTTGCTTTTCTCTGGCTGTTTTTATCTGAGTGACGGCTTCCGTTTATGTCTTCTTGCCATGGCGACGCTCACCCCTTGGCCAGTGATCATATTTTGCCCCACTACTAGAACTCAACTTATGGTCAATATCGCAGCCCTTGGATCACTCCAAGCAAGTATCCACTTCGGTGCGAACCCCAAGCTCACATGAAATCCCTGGGGGATTCGCACCTCAGATTTTGTCGAAAACGAGTCGAATGTGAATGAATTGTGAACACGACTGTGTTTTAAATCGTCTAAATGCCTCCAATATAATGGATATACGGTATAATAATTTCTGGGTACAGCGTGTTTACGCTGTTTTCCGCT # Right flank : GTCTCTTTTTACGTGGAAGAAAGATGACGAGACGATAAACGCAATCTTGGTATATAAAGAACTTACACGCACTTTAACCCACTTTTCAGAATACTCTAGGTCTTCATCAACTAGCTCTTACACGCGTCGATGCAGCGGAGGGTCGGAGGATTTCTGGAGAAACGAAGTGGTCGCCTTTCAAGCCCGATTTCAACTCCCCCTCTACGATCCATTCAGGAAATCGGGCTTGAACAGCGATTGGAAGAAACCTCCGAGCCCGTAGCGATTCCCTCAGAGAACAAAGTCATTTAACAAAGTCATTTAGGTAGCCTATCTCTTTTAAAGCAACAGACGCTTTACCAACCCCCTCTGTTCGTGGTATTCTGTTACCAAATAACTTGAAACGCTTTGACGGGACCAGTAAGAGTGCATTTGCGGTACTCAGAGAGTAAATTCCACAGGCTGAGAGAATTTACCATCCGTATCCTCCGAACCCTATCCCCGAGCGGCCTGCACAGCAG # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:-0.26, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 87061-86627 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384537.1 Paenibacillus massiliensis subsp. panacisoli DSM 21345 K331DRAFT_scaffold00021.21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 87060 32 100.0 35 ................................ ACGTCATATTGCGTGAGATTGTAATCCCTCAACGC 86993 32 100.0 35 ................................ CAGACGATGCAAGCACAGCTTGCGGTGGATGCTAA 86926 32 100.0 34 ................................ TGAACAGAGACATAATCTTTGTACAAGTGCTTGT 86860 32 100.0 35 ................................ AGCAAGCATGAAAACAAGCAAGTTTATGATGATAT 86793 32 100.0 35 ................................ TTTAGTGGCCTCGTACATATCGATTGCTCCACCGG 86726 32 100.0 36 ................................ CACTATGTCCCCGACTATGACGTCAGTTCCTATGAG 86658 31 87.5 0 .........T.C......A........-.... | A [86640] ========== ====== ====== ====== ================================ ==================================== ================== 7 32 98.2 35 GTCGCACTCAATACGAGTGCGTGGATTGAAAT # Left flank : CTATTGCCGGACATTTCGACGGAGATGAGACCCGGGCACAGCAGGAAATTGATAATACCTTGATGCTGCTAGAGATCGAGACAGATAGTGAGATCGGCTTTTGCTGGTGGGATGCGGGCGTGCTGCATTTCTTCATTCGTAAAGAGGATCTGCTGGCAGGCAACTTTGACCGGACTTATTGTGCCTTGTATTCGAGCTAGGGATATAAGGAAATAAAAGATATAAGTGATGTAAATGATGTAAATGATGTAAATAATGTAAGTTAAATGAGAGTGGATTGTGGTCACTGAGGAGGTTCTATGTGGGCATGGGGAATTGCGTGCGTTAGTGGTGCGAACCCCAAGCTCACATGAAATCCCCGGGGGATTCGCACCTCAGATTTTGTCGAAACTGAGTCGAATGTGAATAGGTGGCGTGGAAAAAGCTCGCTGTACCTTTCATTTCTACGAAAGTGCGGTAGAATGAAAGGTGGAAACACCTTTTTTACGTTGTTTTCCGCC # Right flank : AGCTAAAGAGGACCTCCAGCGTAAAAGTGTAGTCAATCCACTTTCCATACTCATTTCCAAGGAACTAAAAGATTCTCCTCAACTTACCATGAAAGTTGAGGGAATTTTTTTTCTCTATGTACGCTCTATCCAAGGGAGAAAATCCAGAAATAATCACGAGCATCAAAAATTGAGTCTTTTGGCGTGGTTTAAAAGTGTGTGTTAAGTGTTTCTTATCCAAAAAAACAAAAAAAGAAGAAAATTGTAGGTTTTTAGCAGGTATTTTAGATAGGTGTATAGAATTATATAGTGCATTATTCGTGCAAATCAATTTTCATATTTTCAGTCATTGGAACTATTTAGAGGTTGGAGTTGATTTGGTGAAATATATTGCTCATATCCGAAAAAGCGATCTTGAGAATCAGTGGGTCGAAGAGCATTTGATTGGCGTGAAGAAGCTTGCTGAGACAATTGGGAATAAGCTCAATATCAGTCATATTACCGGGCTGGCTGGTCTGCTT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCAATACGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.60,-2.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 56314-56744 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUFO01000033.1 Paenibacillus massiliensis subsp. panacisoli DSM 21345 K331DRAFT_scaffold00026.26_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 56314 32 93.8 33 ...........CT................... TGTGTCCACGAAAACAGAGAATACCTGATCTGC 56379 32 100.0 36 ................................ CAATGTGATGAGGGAGGTACACAACCGTGAATGTAG 56447 32 100.0 33 ................................ CTGAGCACACGCATGGTACCTAACCTGATTGTG 56512 32 100.0 35 ................................ CTTGATGACCCGTTTTTCCAGGTCTTCACTGTCAA 56579 32 100.0 35 ................................ ACGTTGACAGAGGTAATGATTGCACAGTCCTCCTA 56646 32 100.0 35 ................................ CCTAACCCATTAGCAGCTTCTTCCGCTTGTGCCTT 56713 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 99.1 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CTCGTATCGCTAACAACCCTCATCCAGCTACCGAATGCCTCCTTTATCCTGACCTATCTGGGTGGCTGTGCTGCAGGGGTGCGTCTCCTGAAGGGCAATCGCTTCGGCCAATGGATTAGCGGTATCTCCTTCGTAGCCACAGCTGTCGTGTTCCCTTTCACAGGCTGGGCGATGCTGTACCCGGGAGTCGTGCTGCTGGTGTTCGCACTTATTCGCTGGCTGCGGGCACGAAAATCCATCATTGTTGATGAAAAAGGTGCACAGACCCGAGCGTAGCCGAGTAACGGAGCGGAAGATAGATAGCGGGTGGAATGATGAGGTGCGAATGCCAAGCTCACATGATTTTCCCGGAGGATTCGCACCTCAGATTTTGTCGAATCGAAGTCGAATGTGAATAAAATGTGAATAAGATCTATTTTTAAAGCCGGGGAAGATTTCCATTTGAACGGATGTACGGTAAAATAGGAGCTGGATGAAGCGTATTTACGATGTTTTCCGCT # Right flank : TAGGCAAAGTAATACGAAGCGGCATAGATGCTCCGAGTCGCACTCTACTTGTGTGCCCATTTTCCAAACCTTCTTTACCAGATCTTAAACAAACGAAAAAAATCACAAAAGAACTCCCTTAGCCACCAACAAATGGCTAGCTCGGAGTCCTTTATGTAATTTTCATATTTCCTTATAAGGTCTTATATCTATTTCAGCTTTATAGTTATTACGTTACAAAATTCAAGCTCCACCAATGGGATCGTATAACGGGGTAATCTGATGAACATTCGTCTGCGTCGGGGTAGCCCCCAAAAACAAAAAACTACTCGCCAAGATTAACAGCACCATTTTTTTCAACACGATCTAACCACACCTTTCCAACAAATTTTGAATACTCCTCTTGCACTTCACGACCTACATAAGAGCGGAAATGCTCAAACATACCTATACTGTTCAAATAACAAGTCTCATTTCGCATGATATGATAGCTTTTCATTGAGACCATTAAATGTTTAAAG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAATA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 71359-71728 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUFO01000008.1 Paenibacillus massiliensis subsp. panacisoli DSM 21345 K331DRAFT_scaffold00005.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 71359 32 100.0 35 ................................ TGGCTGAGCCAGGGCTACGTGCCTAAAGAAATGCA 71426 32 100.0 35 ................................ ATCTTCAATGTGCAGTCTTCCATCCTTCAACGCAG 71493 32 96.9 35 ..C............................. ATTTTTTCGGCGATTTCTTGTGGTGCTCTTTCGAC 71560 32 93.8 36 ..C.T........................... AAATGCAAAAAGGACCTGATAATGAAGCCGGCAGCG 71628 32 93.8 37 ..C...................A......... AACGTCGATACCTTGTGGTATATATACGATGCAGCAA 71697 32 71.9 0 ..CC....T......A...T...CTG.A.... | ========== ====== ====== ====== ================================ ===================================== ================== 6 32 92.7 36 GTTGCACTCTACATGGGTGCGTGGATTGAAAT # Left flank : TCTCGACTGTTCGTGGAGATATGCCATGTTAAAAGGTGAAAATGTAGCTGTTGTGCGGGGAAACGACGTGGAAATGCTATGTGCTTGGAACAGCTGATTGGGAAGGCTACGTGGAGAGAGGCTACGGGCTCGGAGATTTCTTTCGATCGCTGTTAAAGCCTGATTCATTCATATTATATAAAAGAATTAGCGGATTAAATCATGCTTTAAATGCGAGCACTCCGTTTCTACAGAAATCCTCCGACCCTCCGCTACTGCCGTGGCTCAAGTTACTTTAAAAATAGATATCCAAAACTGAGCTGTTTCCAGCTATCTTTTGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGACATTCGCACCTCAGATTTTGTCGAAAGCATGTCGAATGTGAACAATTATTGAACACACCTGCATTTCAGGCTGCATGAAGTCTTCCATTTTAACGGATGTACGGTAAAATAAAAGCTAGACGCAGCGTTTATACTCTGTTTTCCGCT # Right flank : TGAATTACACAATAATATTAGTCGGTGTCTTTGTGTCTTAGAACCTAACTACAAATGCCAAAAGCCCGCGATCCTGACGGATCACGGGCTTGTTTTTTATGCCACTCATTATTCGAAAGCACGGGACATGCACCCACTATAGCGGAGGGTCGAAGGAATTCTGGAGAAACGAAGTGCTCGCATTTAAAGTTCAATTGCAACTGCTAATGCTCTTAGTAAATAAAAGAAATAGGACTTTAACAGCGATCGGAAGAAGCCTTCGAACCCGCAGCGATCTCCACTAACGAACAATTGGTTTTCATGTTACCCGCTACGCATGTCTGCGCCCCCATTACAATTACGTCGTGCTAGAGGCCTTGCTCTTATTCCGCACAGGCGGCAGAATCTTGCTCTTATCAATGGTACGCTTGATCTCCCAAGTCTCAGGCTTCTCATGATCATACTGCTCCAGATACTGTACTACTTCCTTCGTAATCAGAGTAGGCGTAGACGCTCCAGAG # Questionable array : NO Score: 8.59 # Score Detail : 1:0, 2:3, 3:3, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCTACATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //