Array 1 39353-38584 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHJN010000021.1 Klebsiella grimontii strain 4928STDY7387956, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 39352 29 100.0 32 ............................. GTTACACGCAGGTTTCAGGCTCTGGCCTGAAT 39291 29 100.0 32 ............................. GCGCAGAAATAATGATAACTGGATTAATATTC 39230 29 100.0 32 ............................. GGGTATCCCATGCCTTTAGACTCTGAAGCCGC 39169 29 100.0 32 ............................. TTCGCCATATTCACAACGCCCGCGCCACCGGT 39108 29 100.0 32 ............................. ATACTTGATCGGTTTTGCCGTATTTTTTTGTT 39047 29 100.0 32 ............................. TTTTTGGCTTGAAAATGCTTTTTGTGGATAAC 38986 29 100.0 32 ............................. CTGCTGGGCGTGGCCTGCGCTGTAAATACGTT 38925 29 100.0 32 ............................. GTTAATCATGCGGTTCGCCAGCTTATCAGTGA 38864 29 100.0 32 ............................. TGTTCGATATCACCGACGAGGTAGACATAGCG 38803 29 100.0 40 ............................. CTTATCTTGAGCAACCGCGCAACCGCGCAACCGCCTTGGC 38734 29 100.0 32 ............................. TTTCTCCGCCCATAGGTACAGGGTTTGCGTAC 38673 29 100.0 32 ............................. CCTAAAACTGGCGTCACAACAATAAACACCGG 38612 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 13 29 100.0 33 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGATGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 72365-71177 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHJN010000006.1 Klebsiella grimontii strain 4928STDY7387956, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 72364 29 100.0 32 ............................. CCGTTTCCGCCGTCATTAACAGCGGAAATATA 72303 29 100.0 32 ............................. CCGCTGCCGATGTAACCGCGCTTCTGTGCCAG 72242 29 100.0 32 ............................. CGCTTTGGCTTCATTGCGTTCTTTGTAGGGAA 72181 29 100.0 32 ............................. CGCGACGAGTGGGACGAAACGCCGCCGATCCA 72120 29 100.0 32 ............................. CGCGGGAGCCGACGTTATAGGCGAACGATACC 72059 29 100.0 32 ............................. GTTTTCAGGGATGTGCATTGAGTGAATGCATA 71998 29 96.6 32 ............................T GTATTGCGCGTGCGCCGATGTAGAATGCGGGC 71937 29 100.0 32 ............................. GCGTTTGAACCTTTATAACGCCAATCAACAGA 71876 29 100.0 32 ............................. GTCCCCGATGGTAAGGGCGGCGATGGCATGGA 71815 29 100.0 32 ............................. ATGCTGATTGGCTGTTATGTAGAGATGGCAAA 71754 29 100.0 32 ............................. ACCGAGGGTAATCATCGTTTAGCAGAACGTTA 71693 29 100.0 32 ............................. CTAGCAATACGAAAGGTGGAAACCTTTTGCGC 71632 29 100.0 32 ............................. GCGGATATAATAATGGCGATCATCCTGCAGGC 71571 29 100.0 32 ............................. GGAGAGGCAGTCGAAATTTATTAACGCAATGC 71510 29 100.0 32 ............................. GCAGTGACGCCCAGTCCAGCGTCACGGTATAG 71449 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 71388 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 71327 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 71266 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 71205 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //