Array 1 991585-983373 **** Predicted by CRISPRDetect 2.4 *** >NC_000916.1 Methanothermobacter thermautotrophicus str. Delta H, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 991584 30 100.0 33 .............................. AATAACAAGGGACATCGACGACATTAACCGCTA 991521 30 100.0 37 .............................. TAACATCAACCACCTACAATCCAAATGTGTGGTATGG 991454 30 100.0 36 .............................. CAATACCAAAACGCACTATAGTATAACGGAAAACAT 991388 30 100.0 37 .............................. CCGCTATCCTGGTGAGGATAAAATAGAATTCCTCGAT 991321 30 100.0 36 .............................. CGAATTCAAAACTGTCTAAGTAGTATGAGTCTTCAA 991255 30 100.0 38 .............................. GGTGAGTGGTGGGAATAGTATCCTGAGGTACCATCGGT 991187 30 100.0 37 .............................. CATGAAACACTGTGAGAACCTGATACTTGTCACCTCA 991120 30 100.0 36 .............................. TGAAAAAAGGGGATGTGGACTACAGAGAAACTTTAG 991054 30 100.0 40 .............................. GTGTAAACTGGACTAGGACAACAATAACCCACAAGAACCT 990984 30 100.0 37 .............................. AAAAACACAACACAATACGCAACAATATTCGATTATA 990917 30 100.0 32 .............................. GCGAAGCAATCCGTGAATTCAGAAAAATACTT 990855 30 100.0 37 .............................. ATTTTTCTATTATATCATCTTTTATCTGCATGTTCAT 990788 30 100.0 37 .............................. CATTGTGCGTGTATTATTCCGAATAATTGTACTGTGT 990721 30 100.0 37 .............................. CTATTGTGGCCCTGTAGATTTTCCCGTCAAGGACCGG 990654 30 100.0 37 .............................. ACTGTGTCTTGTATTTCTTCGTATTCAGTGTGACTTC 990587 30 100.0 34 .............................. CTCACGAATTTTACACAAAACATCAAAACCATCA 990523 30 100.0 37 .............................. ACTGTATAGACTACCTGATGTGTATGATGTTCTGCGA 990456 30 100.0 37 .............................. AAATAAGCAATTTAAGACAGTTTCATTAGTTGAAACG 990389 30 100.0 35 .............................. TATTGGAATTAAATCGATATTAACGTTTTATTTGG 990324 30 100.0 37 .............................. ATATTCACTATCGGGTTCGTTTACTACCCTTATCAAG 990257 30 100.0 37 .............................. TGTGCTTATAATATTTGACTATTACTGTTTCTGCTGG 990190 30 100.0 36 .............................. AAAAACGCTAAAATCAATGTTCAATATGGTATATAT 990124 30 100.0 34 .............................. GAATTAACCAAACAACCAATACTAAATTAATAAA 990060 30 100.0 32 .............................. CACAAAGAAAAAAAGAAGAGGTGAAACAGATG 989998 30 100.0 37 .............................. CGAGCAGAACCCACAAGCCCAGGACCTGGTGTTCCGG 989931 30 100.0 35 .............................. AAAAGAGGGCAGATATCGGCCCATATTGGAATTAA 989866 30 100.0 37 .............................. GAGGCTCTAAGCATGGACTCAGTGGAGCTGACTGTGA 989799 30 100.0 37 .............................. ACACTCAATCAGAGCGTTGAGTGTGCTTAACCGCCTT 989732 30 100.0 36 .............................. AAGGTGAAAAAGTTCAGATATTATTTATAAAAGTAA 989666 30 100.0 36 .............................. ATTGTGCAGTAAAAAGGGCTAAACAGAGTAAAAAGG 989600 30 100.0 36 .............................. GTTGCGATGAGGAATACGAAGAGGAACAGGTATTCA 989534 30 100.0 36 .............................. GATTTCCATGCATGAACATACCCACCCCGATCATCC 989468 30 100.0 34 .............................. CAACCTGAAACCTCAACCTGAAACCTCAACCTGA 989404 30 100.0 36 .............................. ACTAATGAAACGAATTTGACTTAATTTCGTTATATG 989338 30 100.0 37 .............................. TTTATATCACCTCATATTATTGTCAGAAAGAATCTGA 989271 30 100.0 38 .............................. TTGTTTCCTTGCTGATCCGTGCATGCACAGCCCTCATA 989203 30 100.0 36 .............................. CAAAATAGTACCCATAAATGACCCAAATAGTGAACA 989137 30 100.0 35 .............................. ATAAGCAAGGAGACCCTCGACCATGAACCAGGCCT 989072 30 100.0 37 .............................. TCTTCTAATGCTGAATACAGGCTTAATAGGCATTCGA 989005 30 100.0 36 .............................. TTTTGATCGGCGGATCATGGCACGGGTCATGACATG 988939 30 100.0 37 .............................. CGAGGCCGCACGGGAAAAAGACTTTGAGGGCGTCATA 988872 30 100.0 36 .............................. CGACGAGTTCCATTTCCACCCCTGCCTGGCCGAGCC 988806 30 100.0 34 .............................. CAAGCGGGCGCTGTCCTCGAGGATGACCCTATAG 988742 30 100.0 37 .............................. TTCTGCGGCACATTTTGGACAGTATATACTGTTACGT 988675 30 100.0 38 .............................. CATCGCAACTTGCTATATCGATTATTACATTACTGAGG 988607 30 100.0 36 .............................. TTATGAGCCATAGGTAATTGTTATAGGTTACTTTTA 988541 30 100.0 37 .............................. CTTACTCCTTGAGGCTATTACTGATTTCATAACCTCT 988474 30 100.0 36 .............................. TAAAGAAAGTCGCGGAGAAGTTCGGGTACAGTGTGA 988408 30 100.0 37 .............................. GGGGAGGTTCTACTTCAAGAATGTCAGACTCTCCCCG 988341 30 100.0 36 .............................. GTACTTGTGTATATCGTCAATGTCTCTTGCTAGAAG 988275 30 100.0 37 .............................. TATTTTTTGATTTGAAGCTTTCTTTATTTTCAGATCC 988208 30 100.0 36 .............................. TATAAAAATCTGTCGCATGTAAGTCCCAATAATCCA 988142 30 100.0 36 .............................. GGGGATGAAGAGACGATCAATGAGTACAATGAACTC 988076 30 100.0 38 .............................. TATTGATTTTTTTTATTTTATTAATATATGATGTATAT 988008 30 100.0 32 .............................. GCAGCACAATCAAGGACATCATCTCAGGGAAA 987946 30 100.0 36 .............................. CACATTTTAATCCAAAAATTTTATGAGGTCCTCCCC 987880 30 100.0 37 .............................. ACTAAACATGTGAGTAGAACTTTATCGATAAATAAGT 987813 30 100.0 38 .............................. GCGATGAGGGTGGCCTGGACCCCAGCCTGGCCAAGCCA 987745 30 100.0 36 .............................. TTTCTCAACTTCTTTTCCTTTCATTTTTTCTCACCT 987679 30 100.0 36 .............................. ATAAGTACAGATTCAATAAAACCCACACTAAGCCTG 987613 30 100.0 37 .............................. TCAATATCCTCTTTGAAGACTCATACTACTTAGATAG 987546 30 100.0 37 .............................. TGGCTTCTATTTTCTCCTTTTCTTCGTTTTCCTCTGC 987479 30 100.0 37 .............................. AATTTTAAAGATGAGTTTAAATGAGGCAACAAAATGG 987412 30 100.0 38 .............................. ATCAAAGGATGAGAACTCAGCGGAGTAATTCGCTACAG 987344 30 100.0 36 .............................. AGAAGGACCGGGTACACGAAGACATCCTCAGCACGG 987278 30 100.0 36 .............................. ATAAGTACAGATTCAATAAAACCCACACTAAGCCTG 987212 30 100.0 37 .............................. TCAATATCCTCTTTGAAGACTCATACTACTTAGATAG 987145 30 100.0 37 .............................. TGGCTTCTATTTTCTCCTTTTCTTCGTTTTCCTCTGC 987078 30 100.0 37 .............................. AATTTTAAAGATGAGTTTAAATGAGGCAACAAAATGG 987011 30 100.0 38 .............................. ATCAAAGGATGAGAACTCAGCGGAGTAATTCGCTACAG 986943 30 100.0 36 .............................. AGAAGGACCGGGTACACGAAGACATCCTCAGCACGG 986877 30 100.0 37 .............................. TCAAAGAATCTTATCGACTCGATTATAACGACTAAGC 986810 30 100.0 42 .............................. AGGACATCGTATGCGCCCTCAAGGACGTCCTCACCCTTCTCG 986738 30 100.0 38 .............................. ATTGACTATGTGCAGTTCTTATATGAAGAAGGGTATGT 986670 30 100.0 37 .............................. CCCTGTACTTCCCAGGGCCGTCACCTTCCTCATCCAT 986603 30 100.0 39 .............................. TGATTTTGTCTACAACATCATCGACGATTTTATTAACCC 986534 30 100.0 37 .............................. CATTTGCATGTTTTCTTGTATTTCCTCTTCATTCTAT 986467 30 100.0 36 .............................. TAATCAGGGGTTCTATTGTTTAGAACCCATAAACCT 986401 30 100.0 38 .............................. CAGTTCTGACAGCAGAGATTGTACTCACCGTCAAAATC 986333 30 100.0 36 .............................. TTGTGCGATCATAGTGCTATACGACCTCAAAAACAT 986267 30 100.0 36 .............................. TCAATCATCTCATTCACCTCCTATCCAGTTTCTCCT 986201 30 100.0 37 .............................. TTATGCGGCAGCATATGATCTTAGTGGTAGTGAGGAG 986134 30 100.0 37 .............................. TCTATTTTTACTTTTATTTTCATATCTTTCACCTCTT 986067 30 100.0 36 .............................. AGAGCACTTGCTCCATGGAGGCTTTTCTGTGAAGTT 986001 30 100.0 37 .............................. GATTGGTGTTTAGAACAGTTTTTAGAGGATTTAAAAG 985934 30 100.0 35 .............................. ACCGGTACTTTCCGTTGCAGGTACTCCTTTTTAGC 985869 30 100.0 37 .............................. ATATCGGTTACAGCAATAGCAGTTCATGTCAGATTCA 985802 30 100.0 36 .............................. AACCTGATAGCCTTGTAGTAGTCGAGGCCCTCCACG 985736 30 100.0 36 .............................. TTTCTTCATCTTTTCACGACATGCGGGGCACTTTGT 985670 30 100.0 36 .............................. CATTTGCATGTTTTTTTGAATCTTTTTTTCATTTTA 985604 30 100.0 36 .............................. TATTTTACTATTTTCTAGAATCATTTGCACTATATT 985538 30 100.0 36 .............................. ATTTGTTCTGATTATACCCCCACCTACCCCCACCGA 985472 30 100.0 37 .............................. TTATTATGTTCAACAACGATCTCACAGTCCCTAAACC 985405 30 100.0 36 .............................. ATTTGTTCTGATTATACCCCCACCTACCCCCACCGA 985339 30 100.0 37 .............................. TTATTATGTTCAACAACGATCTCACAGTCCCTAAACC 985272 30 100.0 36 .............................. GAATGAAGGGGACATAGAGAGGATACTGCACATACT 985206 30 100.0 38 .............................. TGACTTCGACGTGCCAGGGCATCAGGAGTCATGGATAC 985138 30 100.0 37 .............................. ATCTACCTTCACACCCCCCACCTACCCCCCACCGAAA 985071 30 100.0 38 .............................. TATCAGGCCTTACGCCCTTCAAGGGTAAACGTTTCCTC 985003 30 100.0 37 .............................. CATACCTCTTCAACATGTCCTTGAACGTTTCAATATT 984936 30 100.0 37 .............................. CTGCAGCGTAAATGAAAAATAATGGACATAATATAGG 984869 30 100.0 36 .............................. GAATGAAGGGGACATAGAGAGGATACTGCACATACT 984803 30 100.0 37 .............................. TTTATATCACCTCATATTATTGTCAGAAAGAATCTGA 984736 30 100.0 38 .............................. TTGTTTCCTTGCTGATCCGTGCATGCACAGCCCTCATA 984668 30 100.0 36 .............................. CAAAATAGTACCCATAAATGACCCAAATAGTGAACA 984602 30 100.0 38 .............................. TCTTAACAACTTTATTATACTCTTCAAGCGTGATGATA 984534 30 100.0 37 .............................. ACCCGACCCGGGCACCGACCCGACCCGGGCACCGACC 984467 30 100.0 37 .............................. AAGGTGGAAGTAGAGACCATCCTCAGTAATTTCAATC 984400 30 100.0 37 .............................. AAAGAGTTGTTTCTCACTAATAATGCATGAGTAACGG 984333 30 100.0 36 .............................. TTTTCATGTCTTTCTGTCGCCCATCTATGAGAACCC 984267 30 100.0 37 .............................. GTCTTTTTTTATTTTGTTATTTTTTTAGTTCTAAAGG 984200 30 100.0 37 .............................. CATGCACAAACATGATCAAAACAATAGGGGCAGACAG 984133 30 100.0 35 .............................. GAAAGAGGATGGACTGGCGTGTGGGGTTGTATTTC 984068 30 100.0 37 .............................. GGTAATGGGTACATTGATGAGCTAGTCTGGAGGGTGA 984001 30 100.0 35 .............................. GCGTCTGTCCCCCTGGACGTATGTCCCCATGTTGA 983936 30 100.0 36 .............................. TCAAATCATTCAGATGGCCAAACCTTCCCAACATCA 983870 30 100.0 38 .............................. GGAAAGAATACGATGAACTCAACAGAGTCATCGTGAAA 983802 30 100.0 38 .............................. TTGTGAAGTCTTGTATGTGTGCTGTCTGCCCGGCGCTT 983734 30 100.0 37 .............................. GACCAACCACAACCAGAATGCACACCCACACAAAACC 983667 30 100.0 37 .............................. ACGACTCCATCCTCTCTAACGACGTCACAGACGCCGT 983600 30 100.0 37 .............................. AAGGTGGAAGTAGAGACCATCCTCAGTAATTTCAATC 983533 30 100.0 36 .............................. CTTTTATGTACTCAGTCCCCCTGAATTTTATTGTTG 983467 30 100.0 35 .............................. CTGCAACGTAGGTAAAAAATAACGGACATAAGATA 983402 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 124 30 100.0 37 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : GAGGGTTTTATGACAAATTCAGGTTTTATAAGCATCTATTTTTAATTAAATGTCCCCAAAAACATTTATTTTTTGGTCATGTTGAATTAGATTTTTCATGAAACCTTGGCTACCATTTTAAAGATTTTATTTATTCTTTATCACACTAAAAAATCTTAAAATTCAATTTAAATTGATTAAATAATCCATATATCCAATCGGGGTCCTTTCGTTCAGTCGTTTATGAGCCATTTTTCAGCATCCCATTATAATAACATAATGTTATTTTAAGCTTCTTTCAGGATTAAAGGTTTTATTATCAACCTGATGGTTTTTTATCCTGCCAAAATTCTTTTTAAATTGATTTAAATACTTTAAATGTCTTATTTATGGATTTTAATACCTTCTGTTAAGTCGTCTATCCATATAAATAGAATGCATTTTCTGGGATCGACAAATTTATATGTCTGAAAGGAGAAATTTCAAAGCGATAGAGGTCAAATGAAGAAAAAATCCGCCCT # Right flank : TTGAATGCGTTTATTTCGTTATATAAAGCTATAACGAACTATAGAACCAGTTGTTTGATCCGGATTTTATTTTATGATTAACATTTCATTACAGCCGGCCTCCTCATGGTACTTAACCTTCCTGACCTCAATGTCATAATCATTAAATTCATCCATCAATGGTTTAAGGTGTAAAGAACGCTTTCTTCTGTGTATATTGTACACAGGAAATATTCTAACCTCTTTCCCGATCCTGAGCATCTCCCTCACAGATTCAACATGGAAACTGTAGTCCAGCAGGTCCTCATACAGGAAAAGGAAATTTGCAGAGACCACCAGGTCAAATTCCCCATCATCAAATGGGAGAAAGGGGAGTTCACCGGCTATGTACTCTGATGGGTTCCTTTTATAGTCATCCAGGAATCTTCTGAAAACCATCCTCCGGTAATCCTCAACAGGGATCCCATCAACCCTGAAATCCCTTAAAAAGTCCCTATGGTTCATGGTGTGGCTCCTGAAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 2 1472442-1475513 **** Predicted by CRISPRDetect 2.4 *** >NC_000916.1 Methanothermobacter thermautotrophicus str. Delta H, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1472442 30 100.0 36 .............................. GGTGAAAATACTAACACCCGTAGAAGCCCTTGAAGA 1472508 30 100.0 35 .............................. ATTACAATCGTAAGCATTATGGTGAATCGGCTTGT 1472573 30 100.0 36 .............................. TGAAAACTACGGAATGGTATAAGAATGGTGAGAGAG 1472639 30 100.0 36 .............................. GTAAATGCGAACTATTACTATAATAATAACCTTTAT 1472705 30 100.0 39 .............................. ATATTTACAATTCTAATTTGATTTTTATTTCCCATGAAA 1472774 30 100.0 37 .............................. ACTGGAGGAGATGGAAAAGTGCAGCACGAGTGACATC 1472841 30 100.0 37 .............................. ATGGAGGTGAAAGGAATGGTAGTGAATGAAAAAATGA 1472908 30 100.0 36 .............................. GAAGCAATGAGCTACGCAGTAGGGTGAGAGAGCAGG 1472974 30 100.0 36 .............................. TTATCGTGAAATACTTATTCTTAATCGGTTTTAGGT 1473040 30 100.0 40 .............................. TTTATATATAATTTTAACATATCCACAAAATAGTACCTAT 1473110 30 100.0 36 .............................. TTACAAACATCTCTATGGTTTCCAGTGCCATGACGA 1473176 30 100.0 36 .............................. TAAAGCTTCATTTGATTTACCGTCCATTACAAACAT 1473242 30 100.0 37 .............................. CCAGGAGAGCATCAATGACATGACCAACCGCCTCAAG 1473309 30 100.0 36 .............................. TTATGCTCTTAGGAGCATAGCGACGTAGTCATACAA 1473375 30 100.0 37 .............................. TTATAAAACCAAGAATGGAAGTAATGAATAGGCCATA 1473442 30 100.0 35 .............................. TGGGATGTCCTCGATAGGCTGCGAGAGAGCGCAGC 1473507 30 100.0 39 .............................. AAAGGGTGGCGGAGAGTCGGTAGAAACGATGTGCAATGT 1473576 30 100.0 37 .............................. ATCAAGCAAATGGTGATCATTATTTCCAGTACTCTTC 1473643 30 100.0 35 .............................. TTTATTTGGACTGGTTTGCCGTCGAGGAAGAATTC 1473708 30 100.0 32 .............................. TATTGGTCTCTGTCTCATCCACCGTAACGGTG 1473770 30 100.0 37 .............................. TTTTTTATTACCCAATATTTTTCTTCAATTCTTTCCA 1473837 30 100.0 37 .............................. TGGACTGATTTAAGCCCAATGGGGGCTCTCAGGGCGG 1473904 30 100.0 38 .............................. ACTGGAAAAAAAGAGTACACCACAATCTACACGTAATA 1473972 30 100.0 32 .............................. GAATGCGAGGAGGCTTAAAGCCACATTCAAGG 1474034 30 100.0 32 .............................. TATTGGTCTCTGTCTCATCCACCGTAACGGTG 1474096 30 100.0 37 .............................. TTTTTTATTACCCAATATTTTTCTTCAATTCTTTCCA 1474163 30 100.0 36 .............................. GCTCAATAAGGGTCGACGTGGCCCCGGAGGCCACGT 1474229 30 100.0 35 .............................. TACTGTGCGATCCACAGCTGACAGTGTAATTAAAA 1474294 30 100.0 37 .............................. TGGACTGATTTAAGCCCAATGGGGGCTCTCAGGGCGG 1474361 30 100.0 38 .............................. ACTGGAAAAAAAGAGTACACCACAATCTACACGTAATA 1474429 30 100.0 32 .............................. GAATGCGAGGAGGCTTAAAGCCACATTCAAGG 1474491 30 100.0 37 .............................. TGAAGCACTGTGTTGGCTCAATGCTGTCTAAGTGCTT 1474558 30 100.0 39 .............................. GGGAATACCTGAAGAAGATAAACGCATAGAGTTTGCCGA 1474627 30 100.0 36 .............................. GCTAGTTCATGGCAGATGAGTTCAGCGAGACCATAC 1474693 30 100.0 35 .............................. TAGATCACGCCCCCAAGCCACCTTAACCCGTCCGC 1474758 30 100.0 38 .............................. GTACATTTCGGTGGCGATTTTTTTCATTTCACCACCGA 1474826 30 100.0 37 .............................. ATCCGAAACATCTCAGTAGCGATTTTTTTCATTTCGC 1474893 30 100.0 38 .............................. GAGTATGGAAATAGCTATGGATGGTGGTTTTCAATTGA 1474961 30 100.0 33 .............................. TGGCGATCGTAAGGGCCCTTAACCTGCGACTGG 1475024 30 100.0 35 .............................. TAGGAGGGAGGAGTGATCCTCCCCTTTCTTTCTCA 1475089 30 100.0 34 .............................. TTCTATCACCTCTTATTTTTCTCTCTGGAGCCGT 1475153 30 100.0 37 .............................. CTATTTTTTCTTTGTCCTCTGTGGTTCTTTTGGATTT 1475220 30 100.0 38 .............................. TTCTATTTTTCTTTTCTTTCTTTTGTCTTTCTTTCTAT 1475288 30 100.0 34 .............................. AAAATAACACTATCTAAATCATCAAAATCATTTA 1475352 30 100.0 37 .............................. TTGAGGATTTCATATGCTTCAAAGGGGCTTTTTCCTT 1475419 30 100.0 35 .............................. GGACACGCGTATAGCCTGAAGACGACCCTCAGCAG 1475484 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 47 30 100.0 36 GTTAAAATCAGACCAAAATGGGATTGAAAT # Left flank : TGCTGACTGGGAGGGCTGTCCATGAACTTTCACTCTGACCACTCAGTAAAAACTGGCCTCAGAGCCTATCTGGTTTTAGCGTACAATCAGAATCTTCATTAAACCACAATGGAACTTATATACTAATTATTAAATTCATAGCACGTTAAAAAATCTTAAAATTAAATTTAAATTGTTTAAATAAGCTATATGCTCAATTGGAGCCCATTCGTCCAGTCGTTTATGAGCCATTTTTCAGCTTCCTGTTATAATAACTTGATGTTATTTTAAGCTTCTTTAAGGATTAGAGGTTTTAATATCAATTATATGATTATTTATCTTGCTAAAATTCTTTTTAGATTATTTTAAATAGTTTAAATCTCTTATTTATGGATTTTAAGGCCTTCTGTTAAGTCGTCTATCCATATAAATGGAGTGCATTATCAGGGATCGACAAATTTATATGTCTGAAAGGAGAAATTTCAGAGCGATAGAGGCCAAATAAAGAAAAAATTGGCCAT # Right flank : TTCATTCTTGGTAGCTTCCACTGTACTTTCCTGATCCCTCCACCGGGAATACCACGGCCTGTACTATCCTTTCACCCCTCTTTAGTGTATACTCATATTCTCCATGATTATGTAAAAGGAACTGGAGGGTACCCCTGAAACCAGGATCTCCAACGGCGGTTTGAACGGATACAAAGGACCTCAGGAGGGTTGACCTTGGCAGGTAGAGCATTGCATATCCCTCAGGTATCTCTATCATCCTGTCAACACTTGCAAGGTAAGCTTTGCCTGGCTCAAGTCTGTAGATGGGCGGCTCAAGCATTTCGAGGGGTGGAAGGTTCTTCTCATCATCAATCAGTGACCCGGGTCCCATCTGTCTGTAAACCTTATCAACCCTCAGGTCAATTCCAGCTGGCTGGACAAGTTCCTCAAAGTCCGGAAAAAGTTTCTTTAAGAGCTGTTCTCCAATCATCATGATTCCTCTGCAATTGCTATTTTCTGGTCTCTGAATCTATTAAAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACCAAAATGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA //