Array 1 72916-74264 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHNU010000016.1 Klebsiella michiganensis strain NRZ-36825 NODE_16_length_177588_cov_71.6356, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 72916 28 100.0 32 ............................ TATAACTCGGCCACAGGTCGGCTTATCCTGAA 72976 28 100.0 32 ............................ ATCAGGCAAAACATTTCCTGCATGTTCGCGAT 73036 28 100.0 32 ............................ TGATCCGCAGATTGTACCGGCGTCGACCACAG 73096 28 100.0 32 ............................ AGACCGATTTTATCAGCCAGGGGGATGATCAC 73156 28 100.0 32 ............................ ATGTACTGTGCCAGCAGCTGAATGCGGAAGGG 73216 28 100.0 32 ............................ GCAGTGTCGCGTTCCAGAAACAGCCTGATTTT 73276 28 100.0 32 ............................ AATATAAATTGCCTGAATTTCTTGCGCGTACT 73336 28 96.4 32 ......................C..... ATTTGCCGAAAATGCTGCCGCAGTTGTATTTG 73396 28 100.0 32 ............................ AGTATCCTAAAGAACCGTTGCGGCGGCGGTTG 73456 28 100.0 33 ............................ TCTACGTACAGCAGAGTAAAGCATGAAGTCAGA 73517 28 100.0 32 ............................ TTCAGGGATATTCGCGATGTCCGCCTGAGCAG 73577 28 100.0 32 ............................ TTACAGGTGACATCGCACACCCCTGATACCTC 73637 28 100.0 32 ............................ TGTGGCAGCCGAACAAAAACGGCGACGGGATT 73697 28 100.0 32 ............................ AGTGCAGCAAACCAGAGAAGGGCGCGCCGGCT 73757 28 100.0 32 ............................ AGAAGAAAAGGCAGACCCGATCAACGAAGAGA 73817 28 100.0 32 ............................ GTATTCGGTCCAGTGCCTGATGGCGCGGATGC 73877 28 100.0 32 ............................ CGCCGCGAAACTGGGCCACGCCTTCAGCTGCT 73937 28 100.0 32 ............................ ACCAACAAACTGCAGGCAGAGCAGAAAGCCGC 73997 28 96.4 32 ............G............... AAACTTCGCGCGGATTTCAGCGATTTTGTTTA 74057 28 96.4 32 ............G............... CGCTACTCCGCAAAAATGAAATTCGTGTGCTG 74117 28 100.0 32 ............................ ATGTTGCGGAGAATCCACAGCCTGTTCTCAGT 74177 28 100.0 32 ............................ TGCACGAAATCAACGTTGCCCGCTCGGTTGCC 74237 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCAATGGCGCGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAATGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTCCAGAGTGCGCAGAAGCACAAACCGGAAGCTGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AAGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTAATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 206105-205710 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHNU010000009.1 Klebsiella michiganensis strain NRZ-36825 NODE_9_length_263029_cov_85.9483, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 206104 29 100.0 32 ............................. GCTATCAGCCTCGTTTTGTAATCCATGTTGCA 206043 29 100.0 32 ............................. AATCTTCTAAACGTGCTGGCTACGAACGTTTT 205982 29 100.0 32 ............................. TCGCGACAGATTGGGGCGACCTGGTATTTTGC 205921 29 100.0 32 ............................. TCTTCAGAGCGCACCCTTGCTGTTCAGGCTGC 205860 29 96.6 32 ............T................ CAATGGTAACAAGTGATCCGAGCGCAATCATC 205799 29 96.6 32 .............T............... GACTCACGAAACGCTTGGTTGATGTCTGAATG 205738 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGCATGCGCTGGTTAAAGCGAAAGTAGCCGTGACCGTTTTCCCGCCTTCCCCTGACGTTGCCTCTTTTAGCGGAATAACGGCGTTATTTCCCTTTATTCAACAGCCAACCCCATTACAGCAAAAAGCGCTTGAGCTGGATATTGATAAACAAGGTCCGCAATTATTTATTCTTGAAGATGTGACTGGTGCTGGAAAAACAGAGGCTGCGCTTATTTTGACACATCGCCTGATGGCTACGGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTGGCGTTGTATCAACCCAGTTCACGGCCAAGCCTGGTGCTGGCGCATAGCGCACGTGGATTAATGGATCGCTTCAATCAGTCTTTGTGGTCGGGAGATTTATCGGGTTCAGAAGAACCCGATGAGCTCCAGCCATCCAGCCAGGGATGCGCCGCCTGGTTTGCCGACAGTAATAAAAAA # Right flank : CCCGGAGGAAACGTGGCAACAGTTCAATACACGTGTTCCCCGCGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCAGCATTCTTTAGTGTGGCAAAGTCCGCTTCCAGGTAATACTTGCCAAATTTTGGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACCGATGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCCTGCCAGACGCGCTGCCAGATATAAACCTGGCTGTCGGCGATGGATCGCGTGCTGGCAGCCAGTAGCAACAATGGTATTAAAAAATGAAAACGCATCATGGCGACAGGCCTTGTTGCCGGATTTTATCGTTAGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGTAGGTTATCCAGCTGTACGTCATGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //