Array 1 351563-349824 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGYS010000001.1 Klebsiella pneumoniae strain 5012STDY7312686, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 351562 29 100.0 32 ............................. AGATCCGCCGCGTACGTCGCGCGCTGGAAGAT 351501 29 100.0 32 ............................. CAGAAATTTACCGTTGCGCCGGCGGTTCAGCA 351440 29 100.0 32 ............................. CGCAGCTGGATTCCGAGCGCGTGGTGTTCGGC 351379 29 100.0 33 ............................. AGGTATCAGCAGAAATGCTGACCCGGATCCTGC 351317 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 351256 29 100.0 32 ............................. CTAAACCCTTTCCCCTGGACGGAGGCGCTCAC 351195 29 100.0 32 ............................. ATTAACGTTTTAATCCCGATATAGTCACTGGA 351134 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGTG 351073 29 100.0 32 ............................. CCATTTCCCCGAGTCAAAATCAGTAAAAAAAT 351012 29 100.0 32 ............................. GCGCGCGCCTCTTCGAGTTGTCGTATCAGCGA 350951 29 100.0 32 ............................. GGGACAAAAAATATCGGCGCCAACGCGGCACG 350890 29 100.0 32 ............................. CACTGATCGCGGCGTATAGCGATACGGGCCCG 350829 29 100.0 32 ............................. GCTATTGACGGGCTGAAAGAGGTGCAGGAGGC 350768 29 100.0 32 ............................. CATTTCAGGCGGCAGGGCGCGCACAACTTGCC 350707 29 100.0 32 ............................. CATACAGTATTATCATAGCGAATTCCCATTGG 350646 29 100.0 32 ............................. CCACCGAACTGGCCGTGCACATTCACCTCAAA 350585 29 100.0 32 ............................. GCGCTCGACCGCCAGACAATCGGCTTTAACGG 350524 29 96.6 32 .............T............... TTTGCGGAAAAAGTGGCCGCGTATTCCGGATT 350463 29 100.0 32 ............................. AGTGCTACACCGATACTGGCCCATCATTCCAG 350402 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 350341 29 96.6 33 ............................T GGCGGCGCGACAAAAATTATACCCAGCAACGAA 350279 29 96.6 32 ............................A GTCGATCCCCACGGTTGAGAAATTATTGACCC 350218 29 96.6 32 ............................C CCTGAATCCGTCAACGTTTGGAGTCTTGAGTT 350157 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 350096 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 350035 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 349974 29 93.1 32 A..................T......... TGCGTCACGACGCCGGCGACAGTGACATCGTC 349913 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 349852 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 29 29 98.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGACACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCAGGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //