Array 1 89327-93352 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOM01000006.1 Clostridium botulinum strain 211 10178_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 89327 29 100.0 37 ............................. CTAATAAGATTATTAAACCTTTTATTCATATGTTCAG 89393 29 100.0 36 ............................. TGTTCTACCATTTCAACAATGGATCTTAGAATATTC 89458 29 100.0 36 ............................. ATATTCAAATTATCACCTCCAACATAAATAATTATA 89523 29 100.0 37 ............................. ATATTAGAAGATATACCTAAATCACAAATGGAATTAC 89589 29 100.0 37 ............................. TGAGCAAGTATAGATTTAATTTTAAATCCAATGCTTG 89655 29 100.0 36 ............................. CCAAGATCTATAATTGCTACAGTTTGATTTTTAAAT 89720 29 100.0 36 ............................. TCAAAACCAGTTATTGCATTAGATAAATCATTCATA 89785 29 100.0 36 ............................. ACAAAAGTAGTTAAATAGAAGTAGGGGATTTATTCC 89850 29 100.0 36 ............................. GTGTATAAGATGCACATATGTCTATTATATGTACAT 89915 29 100.0 37 ............................. GATGGAAAACCTGAAAATCAAGCATTACTAAAAGTTC 89981 29 100.0 36 ............................. ATAGCAAAAGGTGCAAATATAAATATGAGTGAATTA 90046 29 100.0 37 ............................. GTAGTAAAGAAAGATTTAGATTCTAAAGGTATAAATC 90112 29 100.0 37 ............................. TTGCAAAAGGTCCACAATTTTCTTTATATTTATTTAA 90178 29 100.0 37 ............................. ATATGCAATTTACCAAAAGTGGTGCTGGAAATATAAA 90244 29 100.0 37 ............................. TTTTTACATATCCATATAACCATTTTCTTTAGCTTGT 90310 29 100.0 37 ............................. TAAATATGAATCTTCTTTTCTTCATGTCTTCCCCTAA 90376 29 100.0 36 ............................. TTTATTCCAGCTGAACTTCCTGAATTGCAATACAGT 90441 29 100.0 36 ............................. ATTGGTAGAGACCCACTTGTGGGCTCATTATTTTTT 90506 29 100.0 36 ............................. TCAAGTTTTAGATACAGTTCCAGAAGGTAACACATG 90571 29 100.0 37 ............................. AAAATAGAGGTGAGAGATATGGATTTTAGCACAATGA 90637 29 100.0 36 ............................. TCAGCTATTGTAGCAACTCTATTTATTTTTATTTCT 90702 29 100.0 37 ............................. ATAGAGCTAAGAAAAAAGAAGAAGAATTAAATTCTAA 90768 29 100.0 36 ............................. GAAGATAAAAAGAAAGAACTAGATAAACAAGACTTT 90833 29 100.0 35 ............................. TACCAATACTCGATACAGGCAAAAATTTTACAAGG 90897 29 100.0 37 ............................. TAGTTGAATCATCTGCATGTGTAGATCCTGAAAATTA 90963 29 100.0 37 ............................. TATGAAGCAGAAGATAAAGATGTTGTTGATGAAATAA 91029 29 100.0 37 ............................. AGTAATTTTAGAACCACTAGACATGGAATGGTGGATC 91095 29 100.0 38 ............................. AGCTATGAATAAACTAATTGAAAATTATAATGAAGATA 91162 29 100.0 36 ............................. GTAGGATCTAATGGTTTAATGCTGCCTGAAAAATCT 91227 29 100.0 36 ............................. ATATCTCAAAGTGAACAACCTATACCAGATATAAAC 91292 29 100.0 36 ............................. AGTTCTTTAGCTATTCTTAAAGGTGTTTTGTTCTCC 91357 29 100.0 37 ............................. TTCTTTTTTTATTCTTACGTGCTTGTTGTATTTTACA 91423 29 100.0 35 ............................. GTACCAGTATTATTTATATGTAAGGGCATACCTGA 91487 29 100.0 37 ............................. TTGCCACTAATCCAATATAACTAAAATTATTCTGTAG 91553 29 100.0 37 ............................. ATTAACAAATATGCAAATAACAGGAGAACAATACAAG 91619 29 100.0 37 ............................. TATAACATTTTACATCTTTCCTTTCTATTTTAAATTA 91685 29 100.0 36 ............................. TTAGAAAAGCAAAAATATAGATTTGAGTTTGTTGGA 91750 29 100.0 37 ............................. TAGTTACTGTACTCTCTACCTTTTCCTTTTCTAATCC 91816 29 100.0 36 ............................. TGGGTATGGGTTGTTGAATTTGAAAGGTGTGATAAG 91881 29 100.0 36 ............................. ATAACTAGGAATGAAGCTGATTTATACTCACAGATG 91946 29 100.0 37 ............................. CCTAATCTGATATAATTATTTTATTATTAATCGTTTT 92012 29 100.0 37 ............................. ATTGCAGTATCCTCAGCATTAATTGAAATACTTCCAT 92078 29 100.0 36 ............................. ATAACACTTTTTGCCCATGCTCTATATTGTGCTACA 92143 29 100.0 37 ............................. AGTGAACCATGTTCCTACTGCTGCAATTATTGTTTTA 92209 29 100.0 37 ............................. ATAAGAGAATCTATACAACCACCTTTTGTGAATATTA 92275 29 100.0 37 ............................. ATGAAGCTGTAAGGGTTGCCAATAATACTACATATGA 92341 29 100.0 37 ............................. CATATTTTATATATAATAAAGATATTAAAAAACTTAA 92407 29 100.0 36 ............................. AACTTACATCATAGAACTTTGCTAAATCTATTAATA 92472 29 100.0 37 ............................. GATAGATACTTTTGTGTATTCAGAGTTGGGAAAAAAA 92538 29 100.0 37 ............................. GAATTAAAAGTTGGGGAAAATAATATTGCTTTTAGTG 92604 29 100.0 36 ............................. AATTATCAAAGAGTACAACCAATAAAAGATAAGTTG 92669 29 100.0 37 ............................. TGTGCTTTAAACAGATTACTTCTATCATCTATTTTCT 92735 29 100.0 37 ............................. GGAACATAAACATCTTGACCACCAATTACATCTGGAG 92801 29 96.6 37 ...........................T. TTTTTTTCTCTTTCTTCCTTGAGTGTCATTTTTTACC 92867 29 100.0 37 ............................. CCTAAAATAAAAGTTAATAGGGAAGCTTTGAGTGCAG 92933 29 100.0 36 ............................. TTAAAATCAACCTCTTTTCTTATAATAAATTAAATT 92998 29 100.0 36 ............................. CTGACAGAAGTTCCAGAACCTACAGTTTTAATATAA 93063 29 100.0 36 ............................. ATATTTTTGGATGGAGATTTAAAGATAATAAAAATA 93128 29 100.0 36 ............................. CCGGCAAGCATAGTACCGGCAACTAAAGTAGCTATA 93193 29 100.0 37 ............................. ACCAATAAGTCTTAACAAAATAGGTAAATCAGTCTTT 93259 29 100.0 36 ............................. TTCGAAGAAGACGAAGTTGCTTCTGGCTTGGCTCAA 93324 29 79.3 0 ...............C..AAT..A....G | ========== ====== ====== ====== ============================= ====================================== ================== 62 29 99.6 37 GTTTTAGATTAACTATAAGGAATGTAAAT # Left flank : TTTAATTGAAAATGAAAAATATAAAGCGCTAAAGGCATGGTGGTAAATGATGTTCGTTATAGTAACTTATGATGTAGGTGAAAAAAGAGTTAATAAAGTAAGAAAAAAATTGAAAATGTATTTAACTTGGACACAAAATTCTGTTTTTGAAGGCGAGATAACAAATGCTAAATTAAAAAAATGTTTGTCAGAACTTAGTTTAATATTGGACAAAGAAGGAGATTCACTATATATATATAAAGTGAAAAATAATAATAATATAGAAAAAAATGTTGTTGGAGAGTTAAAAAGTTATGATAATATGTTTTTATAAATATATTTGCAGTAAACCTAATTTTATTAAAATTAGGCGTTAATCGTTGAATTTACAAAGCTGAATAGACATTTTAATATATATTAAAAAATATTACTGTATATTTACTGCAATTTATATCAAGAAATGTTATAATAAGTACTATAAAATGGCTTAGATAGGAACACTATTGCTACTATTTTTCGGG # Right flank : GATTGTAGATGGGCAGAAATATTTAGTTAAGTCAGGTAGAGGTGATGGAAAAGGAAAATCTTCTATATTAGAATTACTTAAACATAGAATTGAGGAGGCAAAGAGATGCTTATTCCAAAATCAAAATTAGAGACTGTAGAATTAATGAATGAGGAACATTATTTAGGAGATCTATCTTATGATTTAGTATGTGATGAATATAGTTTTAAGAAAAATGAAGAGATTGAGGATCTTAGCTTGTATCCTGCTGAATTTTATGGACTATTTACTAGAAAAATTAGAAAAGTTCCAAGTGAAGTAATAAGAGAATTTATTGTTGATAGAATAATACCATACAATAGAATGAATTTAGATTGTTATTTAGAATACTATAATTTAGAATATTGGGATGAATGGGAAGTATTTTTAGCAGCAAAGGGAATGTGTTTTTTAGATACCTTTTGGATAAGAAAAGATAAAAGTGAAAGTTATAAAAATCATATTAGATTTACTAATTCTGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATTAACTATAAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 64-549 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOM01000017.1 Clostridium botulinum strain 211 10178_17, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 64 30 100.0 35 .............................. TAATAGAGCGAGAGGAACACATCAAATAAGGGATA 129 30 100.0 34 .............................. AAGTTAAGTTCTTAGATAATAATATTCTAGCCTA 193 30 100.0 36 .............................. TAAATAATGGTAGAATTAAATAAGGGGGAGATAATA 259 30 100.0 36 .............................. GTATAGAGTATATGATATTTCAGATAATTCTATGCA 325 30 100.0 35 .............................. ATAGGCGAAGAGTTCATGCATAAGAGTAATAGATT 390 30 100.0 35 .............................. TCTCCAACTAATGCTTTTCATTCTAGTGTAGAAAG 455 30 100.0 35 .............................. CAAATACACCAGATATTGGATTACCTTGTTAATAT 520 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 100.0 35 ATTTAAATACATCTCATGTTAAGGTTAAAC # Left flank : ATTTGTACATTCTTATATGATCGTTTCCTTACATTCTTATCGTATCATTTATATTGCACTTCTA # Right flank : CCCACAGTAAAATAGCCATTCTCTAAAATCAATAATACCATTAAGGCATTGAAACTTCAAGGTTTCAAGGAAACTTTACCAGCCGTTTGTCAAATTTTAATAAAAATTTTTAAAGGTCACCTTAGCCCTGTAATTTCAATGGATTAAGGGAGTTTATATAAATTTAAGGCTGGTAAAATAAGTTGTTAATTGTTTAAGGTTTTTCTATTTTTAATATGTTACAAATCTTTTCAACAAATAATAGTTCTTTTATATTATGCATAGTCATAATAAAATCTTCTAATCCCTTGAGCATAAAATATCTTCTTGATACTTCATTAAATCTAGTAAATTACCACATATAGTAGAATTTGATTTAGCAAAATTAATATTTTCATTTTTTTCATATCTAAACATTTTATTAATTTTAGGATTGTTTATATTACGCTTATTAAAATAAAAATATACTGCACTTTTATTAATATTATCATCTATTATTTCTTTCATTTCGGCATCCTTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 11559-10675 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOM01000017.1 Clostridium botulinum strain 211 10178_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11558 30 100.0 37 .............................. ATCATTGTTTCTCTACTATTGCCGCTATTATTTTCTA 11491 30 100.0 37 .............................. TTATAGTATCGTTATTTACGATACCTGATGGAGGAAG 11424 30 100.0 36 .............................. TATAATAATACATTGGAAGACTTAGCAAAAATAGAT 11358 30 100.0 34 .............................. CCATCTGTTAAAAAGTCTTCTGTAAATCTAATAG 11294 30 100.0 36 .............................. TATATAAAAGGAATATCCAAAGCCATTAACATATCA 11228 30 100.0 37 .............................. AAAAAATACTTACTAAATCATACAAAAGAAGAGATAA 11161 30 100.0 36 .............................. TTTCCTTATAGTAATCTTCTGCACTTTTAAAAAACA 11095 30 100.0 36 .............................. TTAGATAAAGATAGGTATAGTGCTGTTGCATATATG 11029 30 100.0 36 .............................. TGGCTATTTTTGTATCATTAGGTGTAATATAAATAT 10963 30 100.0 36 .............................. ATATCAATATTTTTGTTGTAGCAATGTACAGTATCT 10897 30 100.0 34 .............................. ACATCTATGCGAGGTGGAAATAATACAGCAGAAA 10833 30 100.0 34 .............................. AATGGTGGTAATGTATCTGCGTATAATACATTTT 10769 30 100.0 34 .............................. TAACTAACTAGTACATGACTTCCAAAATTGTTAG 10705 30 93.3 0 ........................A....A | G [10677] ========== ====== ====== ====== ============================== ===================================== ================== 14 30 99.5 36 GATTAACCTTAACATGAGATGTATTTAAAT # Left flank : GTGACCTTTAAAAATTTTTATTAAAATTTGACAAACGGCTGGTAAAGTTTCCTTAAAACCTTGAAGTTTCAATGCCTTAATGGTATTATTGATTTTAGAGAATGGCTATTTTACTGT # Right flank : AGGATGAAATAAGATTAGTATCTATTAAATATTATATTTTAGAATTTATCCGTGGGTTCTCTAGTAATATGAATTCATAAAGAATAAAAAGTGTATTTTTAGATCTTAATATTTATTAGGACTAAAAATACACTTTTTTCACTTTTAACAAGTATTAATGTAAAATATGGTACAATATATATTAATTAGAAGAAATTTAGGTGAGGTAATTAAATGAATTTTATAGAATTGACAGCAACGGTAATGTTAAAAAAAGATATATATTTTGCAGATGGCGGATATATAATAGGTAAAAATATAAATAAGCTTATGTTATTAGATGAGGAGTTAAAAGAACTTCACCCTAAAAAAGAATATAAACATTATGTTTTTAATAATTTTTATCCATTAGAAAAAGATAAGTTTTATAAGAAAGATAAATTATATGTTTTTAAAATTAGGGGATTAAAGCACGATTTTATGCAAAAAGTACATAATTGTTTACAAATATTAAATAGTGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 84004-83448 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOM01000007.1 Clostridium botulinum strain 211 10178_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 84003 30 100.0 35 .............................. AAGTTATTTCTTAATATTCCTAATAACTTTAGATT 83938 30 100.0 36 .............................. ACAACATTAAAGTTATCTGCCATCTTATCTAGTAAA 83872 30 100.0 36 .............................. CTTGAATTTTTAACTTCATACAAAATGTCACTATAA 83806 30 96.7 37 ...............C.............. TACCTCAATAGCATCTGTCTGTTAGTTCCTAATGCAA 83739 30 100.0 36 .............................. AAGAAATGTTGTCCTAGCCAATTTGCAGCTAATAAT 83673 30 100.0 36 .............................. GATGACATTTTGTACTTCTTATTTAAGTATTTCTGT 83607 30 100.0 34 .............................. CATTCATTAGCAATTGGTAGCGAAACTCTTTCTA 83543 30 100.0 35 .............................. ACTTCTCCAGGAACAGTAATATCTCCTCCACCTGG 83478 30 90.0 0 .................T.....G.....G | G [83450] ========== ====== ====== ====== ============================== ===================================== ================== 9 30 98.5 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : AAGGCAGAGAAGAAGGAGAAAAAATTAAGGCGCTAGAAATAGCAAAAAATTTACTAGATATCTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAGTTAATTAGTGTTTTTTAAAAACATTTAAGATTTAGTTATCCTTGACAAAGTATCCCATTTAAAGAGTTATAATGATTTTTTTAATTGTTATAGCTCTTTATTTTTCTCCGAAAAATACAGATATTAAGCTCAAATTTACTTTAAGAATTGTAAAAATAAAGTAAGTTAGCTATAATATTAAGCATTCTATTTTACCAACCATAAATTTATATAAAACACCTTAATCCATTGAAATTACAGAGCTAAGGTGACCTTTAAAAATTTTTATTAAAATTTGACAAACGGCTGGGAAAGTTTCCTTCAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTTAGAGAATGAGGATTTTACTATG # Right flank : AAAAGGGCATGCTAATAACTAATAGAATGGCTGCAATGATTGGTTCATTGCAAGAATAAATATTAAAATGTATTATTGAAATTGTTTATATATAATGGGGAAAAAAATGACTGAAATGCAAATGTGGAATGAATATATTAAAATTAATACTAATGCAAAAGAGTATCAATCATGGTCATTTGGTGGAAATACACCTGAAATGCCAAATTTGTTGGCTGAATTAGTATTAAAGGGGATTAAAACTGCAACTGCTAGTGCATATCCTTGTTATATTGCAGAAAATGCTCCATTACCACCAGTTGGAGGATATAATTTGATATTAAATACAAAAGGTGAGGCTATTTGTATCATAGAAACTACAAAAGTATATACAATACCATTTAACCAAGTTAAGGAGGATCATGTGTATAAAGAAGGTGAATTTGATCGTACACTTATATCTTGGAGAAAATGTCATTCTAAATTTTTTTCTATGGAATTAAAAGAGATTGGTCAAGAAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 85907-85416 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOM01000007.1 Clostridium botulinum strain 211 10178_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 85906 30 100.0 35 .............................. TATTCATAATAAAATGTACCACCATTATTTTTTAA 85841 30 100.0 34 .............................. AAGAACAAAAGAAGGTATAGAGACTGCAAGATTG 85777 30 100.0 37 .............................. TCTGAGGTATATCCATTTATACAAAGTAAGAGTTCCA 85710 30 100.0 34 .............................. TCAAGTTTATGGTCTATCTCTTCTAAGATAGTGC 85646 30 100.0 37 .............................. TAATCTTTATAGGTGTAAATATTTATCTCTTTATCAT 85579 30 100.0 37 .............................. ATTTCTCCAATTGTAATTCCAACAAGATCACCTAATC 85512 30 96.7 37 ................G............. TTACATTGTCTTCATTTAAATCAATTTCTCTACTTAA 85445 30 90.0 0 ................G.......G.T... | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 98.3 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : TATGGGGGGAGTATTAAATAAGCGAGCTCATACAAGCAATGACTTGGGGTATCTTAAAGTGGTCTGCCCAAGCTATGATGGAGAAAAGTATTATAAGCAGGAATGTGTAGTAACTGATGGAAGTTTGATTACTGCTTCTGGAATAGCTCCCCTTGAATTTGCTTTCCATATATTGAAAATTCTAGATGTATTCTTACCGCAAACCCTAGATTCCTGGTACAATCTTTATAAAACCCAAGAGTCAAAATATTTTATTGAGTTGATGAACTCAATTCAATAAAATAGCTTAAAGTGGGTAAGATAGCTATAATATTAAGTATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACAGGGCTTCAGTGATTTTTAATAAGGTTTCTGAAAATTTTACAAACAGCTGAGAAAGTTTCCTTCAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTTAGAGAATGGCTATTTTACTGTG # Right flank : CCCTATAATTTTTAAAATCATTTATAAATTCATAATAATAATATATAATATATATAAGGAAATAATACAAATGATAGTGATAAATAAGAAAGGCGTGAAATAGCTTGATTAAAAAGCATGATTTTGATGCAGCATGGAAATCAATATTAGAAGCCTTTGAAATAGAAATAGTAGAGCTACTTTTTCCAGAAATATTTGATAATATTGCATGGCAACTTGGAACCGAAAGTCTAGATCAAGAACTACAAGAAATTCAAAAGGATATTTTTGATAAAGATAGTGCAGAAAAGATAATATCAGATAAGATAATAAAGGTTAGATTAAAAGATAAAGGAAGTAAAATATTATTTATTCATGTAGAAGTACAGAGCTATAGTAGCGATGAAGCTGTATTTGGCGAAAGAATGTTTAGATATTTTTATAGAATTTGGGATAAATTCAGATATAAATACAAAGATAAATCAGAAATAGTTGCTGCGGCAATATACACTTACAAGGGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 3 88903-88671 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOM01000007.1 Clostridium botulinum strain 211 10178_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 88902 30 100.0 36 .............................. TATCTTGTCCAACCTTCTTCTGGTTGTAACAATTGC 88836 30 100.0 36 .............................. AATTCAATTACCCAAACATAAGGATTAGCATTAAAT 88770 30 100.0 41 .............................. GAGGATGGCGATATGGTATTCGATTTTGGAGTATCGGCAGG 88699 29 96.7 0 .......-...................... | ========== ====== ====== ====== ============================== ========================================= ================== 4 30 99.2 38 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : AAAAACTACATTCTTAAATGATCGAAAACTTACATTCATAGGTTGACATTTATATGCAAGAAGTACAAATTAATTAGTTAACT # Right flank : AGTTGTATATAACCATCTTGGAATGTTTGTAGTGATTTAACCTTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATGATATGATGCTTTTAAAGGTACCTGAGCCATTGAGGGAATTTTATAGGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGACGCAGAACCCTTTAAAAGTGAAAGCTGGTTTTCATTTGGTACAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGAAGATAATTATGGTAATTCCATTACTTCATGGGATCACGATATAGATGATGAAAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //