Array 1 470812-468833 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379029.1 Hungatella hathewayi WAL-18680 supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 470811 30 100.0 34 .............................. TGTCCGGCAGCTCCCTGTTTGTCGCCATAATATC 470747 30 100.0 36 .............................. TCAATATCATATGCGTATAAAGAATCCGGTTATAGC 470681 30 100.0 35 .............................. ACTCTTTTAGAGTTAAAGACCAAGATGGACAAACT 470616 30 100.0 34 .............................. TAGGTCTGTCCTTCCTGATTGACACCGGTATACA 470552 30 100.0 34 .............................. GCTATCGGATTGATTAAGAAGACAGACATGCAGT 470488 30 100.0 36 .............................. CACGGAAGCCACCCTTCTAACCGCCATGGAGAATGC 470422 30 100.0 35 .............................. ACATAGCTGCACTCATACCCGCAGCTGATTTCCCT 470357 30 100.0 36 .............................. AATTTCCTGTTTCGGCCAGTTATTTTACCTTGAGAC 470291 30 100.0 36 .............................. GAATCTCCTTCTCCATCGGCATCCCCTCCCTTCTTC 470225 30 96.7 36 ..A........................... TTAAGGATATGACCGGTATAGGGGTACTGGTACCCG 470159 30 100.0 35 .............................. TGCACTATATGGTAAGTTGGTCCGGTGGAAAAGAT 470094 30 100.0 36 .............................. GGTACCGGATGATGATTTTGTTCTGACCCAGGTCCT 470028 30 100.0 36 .............................. ACGAACGGTATTGCAACGCTGTCGGTTATCTTTATC 469962 30 100.0 36 .............................. TCCATGGTAAAGTGCAGGTAAAGAAGTTTCTTAATT 469896 30 100.0 36 .............................. GCAATATTGCGTCTGGAATCAACCAGATTTCAGCAT 469830 30 100.0 35 .............................. GAAAGAGTGTTTGTTGTTGCAGGAGTAAATGAAAA 469765 30 100.0 34 .............................. TCCTTTCTGTTGCGATATCGCAATTTGAGTATAA 469701 30 100.0 35 .............................. TGTAATTTTTTCCCATGATATAAGATGGGTCATCA 469636 30 100.0 35 .............................. AACTACGCAAGATGGATGTGTGGAAACTTTGGAAC 469571 30 100.0 36 .............................. TCTTTGATAAGTTTTGTATTCCTTCGTCGAGGATGT 469505 30 100.0 35 .............................. CCAGTCTCCTCATCGGCGCCGGTCTCCGTCTGTTC 469440 30 100.0 34 .............................. CAACAGTCACTTGAGGAAACAGCGGTTTTCAAAG 469376 30 100.0 34 .............................. AACGGTGCAGCCTCTACCGAGCCATTTGACCATG 469312 30 100.0 34 .............................. TAATACCCCTCTTTATTTTTGTATTTCATATCCT 469248 30 100.0 35 .............................. GTATAATTGCCAACCACCAAGCCGTCCCCATTTTT 469183 30 100.0 35 .............................. TTGCATACAGAAAAATGGTTTCCAGGACCTTATGG 469118 30 100.0 36 .............................. GGAGGTAGCAAAATGAGAACAAAAAGCGAGATATTG 469052 30 100.0 34 .............................. CATTTGAGATGTATGCTGGACTTGGCAGCAATAA 468988 30 100.0 34 .............................. GATAAGGTTTTTGGAGGCATTGTGAAAGGAGCAA 468924 30 100.0 33 .............................. TAGATGCCGTATGGGTCTGCGTTGTCGACATGG 468861 29 96.7 0 .........................-.... | ========== ====== ====== ====== ============================== ==================================== ================== 31 30 99.8 35 GTTGAAGAAGAACAGTAGCTGTATTTAAAT # Left flank : TCCATTTTCTCTGAAGGAGGGAAAGTAGATGGGGAAATCAATGAATTATAATTATGCATTTGTGTTTTATGATGTGGGAGAAAAGCGGGTGCAGAAGGTGTTTAAAATTTGTAAAAAATATTTATCGCATTTTCAGTATTCAGTTTTTAGAGGTGAGATGACTCCATCAAAATTGATTTCTTTAAGGAGCGATTTGAAGAAAGTAATAGATACGAAGGAGGATTTTGTTTGCATTATAAAGTTGATGAATGATAATGTTTTTGGTGAAGAAATATTAGGAGAGGCAAATGGGTTGACTGGGGAAGAGCTTATTCTTTAATGGATTTTACCAGATGGGGAGTTGGAAAGAATTGGCGGAAGCAGCATGGATACTGGTTAAAATGAGAAGATTGGGAGATGATTTGGAAGGAGGGGGAGTGGCTGGTAAAAAAGTTGAAAAGTGTTGATTTTATATAAGGATATGGTATTATTGAGGAATGAAGAATGTAGTAAATGCGTGG # Right flank : AAGTATTTGTGAATGAAGATGACCTTGATAGGTTAAAAAAGTACTAGCATATTTAATTTCTCACAGTATATTATATTTTAGAGAGTTTTAACTGTATTGCTTAAAAGGTATCTCAAATCCTATAATAATTTGAGATACCTTTTATTCTTCTGTTATATCAGGTTCATATACTAGGATTTCTTCGATTCTGCAGTCAAGAATTTCACAAAGTTTGTTTAGGATGATTGTTTTTACGACTTCATTTTTTCTGAGGCGCTGGAGTTGGGCTTTATCGATGCCGTAATCTTTGATGAGTTTATATTGACTGATATTTCTTTTTTTCATGGTTTCCCAAAGGGGGTCATATTTTATCACGATATAAATTCTCCTTTATACTTGTATTTTATAGGTTGAAGCATTATAATAATATGGTGCGTGTACACACCATATTTAAGCGGATTTATATAAGAAAAAGAGAGGTATTTCATGGATAAGGTAAGAGTAGAGTCTAAAAATACAGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGAAGAACAGTAGCTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 481777-481028 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379029.1 Hungatella hathewayi WAL-18680 supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 481776 28 100.0 38 ............................ TTAAGAAATCGACAGTAACATTAAAATAGTCGGCTAGG 481710 28 96.4 38 .............A.............. GGAGGTTGTATACCGCAATACAGGTGAGCGCCTTCCGG 481644 28 100.0 39 ............................ GATATTGATTGATGATTACAAAGCGAAACAACTTGCAGT 481577 28 96.4 36 .................A.......... GAAATGCTAAAAGCACCACCAGAACAATCAATCCGT 481513 28 100.0 37 ............................ GCTGGTAAGGTGCAGATTGAGTATCACTCTGATGGGT 481448 28 100.0 37 ............................ TCTGCTGTGGAGATGCCTGGGAAATAGGTTGTATGGT 481383 28 96.4 37 ..........T................. ACAACATGGACCCGGACAGTCCCATGGGCGTCGCGGT 481318 28 100.0 39 ............................ TTCATGGCCCGTAGATGCCCGTTGACAGTGGATGTACGT 481251 28 96.4 38 .............A.............. TATAGGCCCTGGAGGAGACAGGGCGGCCATCCGGAGGG 481185 28 96.4 37 .............A.............. TAAATTTTTGCAAGATATACAAGGGCATGGACATTAG 481120 28 100.0 38 ............................ CCTTTGGAATTGGTTATTGTTTCGGTGACCATTCTAGT 481054 27 75.0 0 ....A.....T.A..T-..A...G.... | ========== ====== ====== ====== ============================ ======================================= ================== 12 28 96.4 38 TGAAGAAGAACAGTAGCTGTATTTAAAT # Left flank : CACAGACGGTTGGGTATTTGGCTGGAATCGAAGGATATCCAGAGTCAGAAATACCGGAAGTACTGCCGGTGATTGAGGAGGAGATGCTGGTTATGAGAGGTTTTACCAGCAGGAGGATGGATGAACTGCTGATGAATCTGAGAAAAGCCGGGGTGCCGAAGATTGCGCTGAAGGCTGTGGTGACGGAGAGTAATTGCGGGTGGTCGTTTTATCATTTGTATGAAGAGATTAGGGAAGAGCATAAGAAGATGAGTTTATGATATGGGGATAAAAGTGGAGAATTGCTTTAACAGATACTCTTCATGGGAAATATTTAAATATAAATTTACCAGGCAGAAAAGTCTGGTAAAAGCTGAAAGACTGCATAAATGCTAGTTTCTGAAGGGAATTAGAAGAGATATAATAAAGTGCGGGGACAGCTTGGTAAAAAATTGAGTATATGTTGATATTACTGGGGGATATGGTATTATAAAGGGAAAAAATGCTTTAGATATGTTGGG # Right flank : AAATCACAGGTCTAGAGTATAATATAAATAGTGGACGAGGTGGTTTTGCCTTATTTAGGGAGGTTGGCTATGATTGAGAAATTGATTGCAGAAGCAACTGAGTGTGATTTCAAGGTTGCTCTTGAAACTAGAAGGCCTAAAAGCTGGTTGAAAAGTGTCAGCGCTTTTGCTAATGGTATTGGTGGAACCTTATTTTTTGGTATTGATAATGAGGGTAAAATTACAGGGATTGAGGATATTCAGTCTGACGCAGAAGCGATTAGTCGTTTTATTAAGGAACGTATAACGCCATTGCCTCAATTTGTTCTTACTCCTGTCAGGGAGGGTGATAAAGATATATTGTTGCTGTCAATTGCTGCCGGCCGAACAACGCCATATTATTATAAGGCGGATGGCATAATGGAAGCATATATTCGTGTTGGAAATGAAAGTGTGGTGGCACCGGATTATGTTGTTAATGAATTAATTTTAAAGGGGTCTAATCGCTCCTTTGATACATT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAAGAAGAACAGTAGCTGTATTTAAAT # Alternate repeat : TGAAGAAGAACAGAAGCTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 1883388-1883621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379027.1 Hungatella hathewayi WAL-18680 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1883388 33 100.0 33 ................................. GCTTAAAGGGAACCGGGTCTCATAGGGTGTCAG 1883454 33 100.0 35 ................................. TCAGTTTTTAATAATTCTTTCATTCCGTCCTGAAA 1883522 33 93.9 34 ...........T........C............ GTTATTAAGTGTACTATCCTTATTTTCATCTTGT 1883589 32 75.8 0 ..TG...T.......G...-A....G......G | T [1883606] ========== ====== ====== ====== ================================= =================================== ================== 4 33 92.4 34 GTCACAGCTTGCGAAAGCTGTGTGGATTGAAAC # Left flank : GTGATTCATCTTGCTTTTTATGCGGCTTCAGATGATTATACGCTTCAATTTGAGAGTGCAGCCGGAAAGGGCTATGCAGACTGCTGCATGATTCCCAAAAAGCCAGGGCTCCCAGGAATAATTTTGGAGTTAAAATATAATGGAAATTTGGGAAAAGCAATTGAGCAGATAAAAGAAAAAAATTATATGAAAATTTTTGAACAGCAGGTGAAATCTATTTATTTGGTTACAATTAATTATGATAAGAAATCTAAGAAGCATAAATGTTGCATAGAAGTAGTGGATAATAAATGAGATTTAATGGAAATTTGGAAGAGTGGAAACTGTGGTGCGAAATGGAAGTAAACATAAAAATGCTTAGAGTTTCGCACCTTTGTAAATGAAGTTTTTATTTGGTTTATGAAGTGCTATATGATTTAAATGGATATATGCGGAAAAAAGGTACATACGCTTTGTGTACTTTTGACAATATGTTATGATATAAATTGTGAAAAATTGCT # Right flank : GCTTTCCATGTCCTTTTCAATTAGGCTTTTAATAGTCAGGGTTCGCAAGGGCACCAGTGATGAAATACCCATCAACATCTTTTTAATGTTTTTCAGGCAGATAGAAGGAAATAATTTCCTATCTACCTGAAACATCTGGCTAGGATGACGCATTGTAATCCCACCAAAGCAACGCAGTCTTTTGCCTTTTCGCCCTTGCCATCTCCCCTAAATGGTGATAAAATAGAAAAGATGTGCGCAGGACTGCGCGGGAAAAGGACGAATCAAGAATAGAAAAGGAGTGTTGTTCCATGTCTGGACATTCAAAGTTTGCTAATATTAAGCATAAAAAAGAGAGAAACGATGCGGCGAAGGGGAAAGTGTTTACGGTTATCGGCAGGGAGATTGCGGTTGCGGTGAAGGAAGGCGGGGCGGACCCGGCGAACAATAGTAAGCTGCGCGATGTGATTGCTAAGGCGAAGGCCAATAACATGCCGAACGATACCATTGACCGCGGAATT # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:0, 3:3, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCTTGCGAAAGCTGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //